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3HI1
Structure of hiv-1 gp120 (core with v3) in complex with cd4-binding-site antibody f105
PDB DOI: 10.2210/pdb3hi1/pdb
Classification: STRUCTURAL PROTEIN/Immune System Organism(s): Homo Sapiens , Human Immunodeficiency Virus Type 1
Deposited: 2009-05-18 Deposition Author(s): Arthos, J. , Burton, D.R. , Cavacini, L. , Chen, L. , Dimitrov, D. , Hessell, A.J. , Kwon, Y.D. , Kwong, P.D. , Mascola, J.R. , Nabel, G.J. , O'Dell, S. , Pancera, M. , Posner, M. , Sodroski, J. , Tang, M. , Wu, X. , Wyatt, R. , Xu, L. , Yang, Z. , Zhang, M.-Y. , Zhou, T.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.9 Å
Structure of hiv-1 gp120 (core with v3) in complex with cd4-binding-site antibody f105
Arthos, J. , Burton, D.R. , Cavacini, L. , Chen, L. , Dimitrov, D. , Hessell, A.J. , Kwon, Y.D. , Kwong, P.D. , Mascola, J.R. , Nabel, G.J. , O'Dell, S. , Pancera, M. , Posner, M. , Sodroski, J. , Tang, M. , Wu, X. , Wyatt, R. , Xu, L. , Yang, Z. , Zhang, M.-Y. , Zhou, T.
Primary Citation of Related Structures: 3HI1
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Glycoprotein 120 | G | 321 | Homo Sapiens , Human Immunodeficiency Virus Type 1 | TENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTGGSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTRPNNNTRKSINIGPGRALYTTGEIIGDIRQAHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWNDTRKLNNTGRNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE |
| Glycoprotein 120 | J | 321 | Homo Sapiens , Human Immunodeficiency Virus Type 1 | TENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTGGSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTRPNNNTRKSINIGPGRALYTTGEIIGDIRQAHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWNDTRKLNNTGRNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE |
| F105 Light Chain | L | 215 | Homo Sapiens , Human Immunodeficiency Virus Type 1 | EIVLTQSPGTLSLSAGERATLSCRASQSVSSRYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRVEPEDFAVYYCQQYDNSVCTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| F105 Light Chain | A | 215 | Homo Sapiens , Human Immunodeficiency Virus Type 1 | EIVLTQSPGTLSLSAGERATLSCRASQSVSSRYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRVEPEDFAVYYCQQYDNSVCTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| F105 Heavy Chain | H | 225 | Homo Sapiens , Human Immunodeficiency Virus Type 1 | QVQLQESGPGLVKPSETLSLTCTVSGGSISSHYWSWIRQSPGKGLQWIGYIYYSGSTNYSPSLKSRVTISVETAKNQFSLKLTSMTAADTAVYYCARGPVPAVFYGDYRLDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS |
| F105 Heavy Chain | B | 225 | Homo Sapiens , Human Immunodeficiency Virus Type 1 | QVQLQESGPGLVKPSETLSLTCTVSGGSISSHYWSWIRQSPGKGLQWIGYIYYSGSTNYSPSLKSRVTISVETAKNQFSLKLTSMTAADTAVYYCARGPVPAVFYGDYRLDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2009-05-18 Deposition Author(s): Arthos, J. , Burton, D.R. , Cavacini, L. , Chen, L. , Dimitrov, D. , Hessell, A.J. , Kwon, Y.D. , Kwong, P.D. , Mascola, J.R. , Nabel, G.J. , O'Dell, S. , Pancera, M. , Posner, M. , Sodroski, J. , Tang, M. , Wu, X. , Wyatt, R. , Xu, L. , Yang, Z. , Zhang, M.-Y. , Zhou, T.