Crystal structure of an alka host/guest complex 2'-fluoro-2'-deoxy-1,n6-ethenoadenine:thymine base pair
PDB DOI: 10.2210/pdb3cwu/pdb
Classification: hydrolase/DNA Organism(s): Escherichia Coli , Synthetic Construct
Deposited: 2008-04-22 Deposition Author(s): Bowman, B.R. , Lee, S. , Verdine, G.L. , Wang, S.
Crystal structure of an alka host/guest complex 2'-fluoro-2'-deoxy-1,n6-ethenoadenine:thymine base pair
Bowman, B.R. , Lee, S. , Verdine, G.L. , Wang, S.
Primary Citation of Related Structures: 3CWU
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
DNA-3-methyladenine glycosylase 2 | A | 282 | Escherichia Coli , Synthetic Construct | MYTLNWQPPYDWSWMLGFLAARAVSSVETVADSYYARSLAVGEYRGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGRLGAARPGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA |
DNA-3-methyladenine glycosylase 2 | B | 282 | Escherichia Coli , Synthetic Construct | MYTLNWQPPYDWSWMLGFLAARAVSSVETVADSYYARSLAVGEYRGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGRLGAARPGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA |
DNA-3-methyladenine glycosylase 2 | C | 282 | Escherichia Coli , Synthetic Construct | MYTLNWQPPYDWSWMLGFLAARAVSSVETVADSYYARSLAVGEYRGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGRLGAARPGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA |
DNA-3-methyladenine glycosylase 2 | D | 282 | Escherichia Coli , Synthetic Construct | MYTLNWQPPYDWSWMLGFLAARAVSSVETVADSYYARSLAVGEYRGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGRLGAARPGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA |
Nucleic Acids / Hybrid | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
DNA (5'-D(*DGP*DAP*DCP*DAP*DTP*DGP*DAP*(2FE)P*DTP*DGP*DCP*DC)-3') | e | 12 | NA | GACATGANTGCC |
DNA (5'-D(*DGP*DAP*DCP*DAP*DTP*DGP*DAP*(2FE)P*DTP*DGP*DCP*DC)-3') | g | 12 | NA | GACATGANTGCC |
DNA (5'-D(*DGP*DGP*DCP*DAP*DTP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3') | f | 12 | NA | GGCATTCATGTC |
DNA (5'-D(*DGP*DGP*DCP*DAP*DTP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3') | h | 12 | NA | GGCATTCATGTC |
Method: X-RAY DIFFRACTION
Deposited Date: 2008-04-22 Deposition Author(s): Bowman, B.R. , Lee, S. , Verdine, G.L. , Wang, S.