PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

3C2K

Dna polymerase beta with a gapped dna substrate and dumpnpp with manganese in the active site

PDB DOI: 10.2210/pdb3c2k/pdb

Classification: TRANSFERASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2008-01-25
Deposition Author(s): Batra, V.K. , Beard, W.A. , Pedersen, L.C. , Shock, D.D. , Wilson, S.H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.4 Å

3c2k
Literature

Dna polymerase beta with a gapped dna substrate and dumpnpp with manganese in the active site

Batra, V.K. , Beard, W.A. , Pedersen, L.C. , Shock, D.D. , Wilson, S.H.

Primary Citation of Related Structures: 3C2K


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*DCP*DCP*DGP*DAP*DCP*DAP*DGP*DCP*DGP*DCP*DAP*DTP*DCP*DAP*DGP*DC)-3') t 16 NA CCGACAGCGCATCAGC
DNA (5'-D(*DGP*DCP*DTP*DGP*DAP*DTP*DGP*DCP*DGP*DC)-3') p 10 NA GCTGATGCGC
DNA (5'-D(P*DGP*DTP*DCP*DGP*DG)-3') d 5 NA GTCGG

Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase beta A 335 Homo Sapiens , Synthetic Construct MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2008-01-25
Deposition Author(s): Batra, V.K. , Beard, W.A. , Pedersen, L.C. , Shock, D.D. , Wilson, S.H.