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3BRD

Csl (lag-1) bound to dna with lin-12 ram peptide, p212121

PDB DOI: 10.2210/pdb3brd/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Human Herpesvirus 6B (Strain Hst) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2007-12-21
Deposition Author(s): Kovall, R.A. , Wilson, J.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.21 Å

3brd
Literature

Csl (lag-1) bound to dna with lin-12 ram peptide, p212121

Kovall, R.A. , Wilson, J.J.

Primary Citation of Related Structures: 3BRD


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*DTP*DTP*DAP*DCP*DTP*DGP*DTP*DGP*DGP*DGP*DAP*DAP*DAP*DGP*DA)-3') b 15 NA TTACTGTGGGAAAGA
DNA (5'-D(*DAP*DAP*DTP*DCP*DTP*DTP*DTP*DCP*DCP*DCP*DAP*DCP*DAP*DGP*DT)-3') c 15 NA AATCTTTCCCACAGT

Proteins
Molecule Chains Sequence Length Organism Sequence
Lin-12 and glp-1 phenotype protein 1, isoform a A 477 Human Herpesvirus 6B (Strain Hst) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GPLGSGDSVQSLTSDRMIDFLSNKEKYECVISIFHAKVAQKSYGNEKRFFCPPPCIYLIGQGWKLKKDRVAQLYKTLKASAQKDAAIENDPIHEQQATELVAYIGIGSDTSERQQLDFSTGKVRHPGDQRQDPNIYDYCAAKTLYISDSDKRKYFDLNAQFFYGCGMEIGGFVSQRIKVISKPSKKKQSMKNTDCKYLCIASGTKVALFNRLRSQTVSTRYLHVEGNAFHASSTKWGAFTIHLFDDERGLQETDNFAVRDGFVYYGSVVKLVDSVTGIALPRLRIRKVDKQQVILDASCSEEPVSQLHKCAFQMIDNELVYLCLSHDKIIQHQATAINEHRHQINDGAAWTIISTDKAEYRFFEAMGQVANPISPCPVVGSLEVDGHGEASRVELHGRDFKPNLKVWFGATPVETTFRSEESLHCSIPPVSQVRNEQTHWMFTNRTTGDVEVPISLVRDDGVVYSSGLTFSYKSLER
Protein lin-12 D 29 Human Herpesvirus 6B (Strain Hst) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SPGNRTRKRRMINASVWMPPMENEEKNRK
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2007-12-21
Deposition Author(s): Kovall, R.A. , Wilson, J.J.