PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

3BRD

Csl (lag-1) bound to dna with lin-12 ram peptide, p212121

PDB DOI: 10.2210/pdb3brd/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Caenorhabditis Elegans , Synthetic Construct

Deposited: 2007-12-21
Deposition Author(s): Kovall, R.A. , Wilson, J.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.21 Å

3brd
Literature

Csl (lag-1) bound to dna with lin-12 ram peptide, p212121

Kovall, R.A. , Wilson, J.J.

Primary Citation of Related Structures: 3BRD


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*DTP*DTP*DAP*DCP*DTP*DGP*DTP*DGP*DGP*DGP*DAP*DAP*DAP*DGP*DA)-3') b 15 NA TTACTGTGGGAAAGA
DNA (5'-D(*DAP*DAP*DTP*DCP*DTP*DTP*DTP*DCP*DCP*DCP*DAP*DCP*DAP*DGP*DT)-3') c 15 NA AATCTTTCCCACAGT

Proteins
Molecule Chains Sequence Length Organism Sequence
Lin-12 and glp-1 phenotype protein 1, isoform a A 477 Caenorhabditis Elegans , Synthetic Construct GPLGSGDSVQSLTSDRMIDFLSNKEKYECVISIFHAKVAQKSYGNEKRFFCPPPCIYLIGQGWKLKKDRVAQLYKTLKASAQKDAAIENDPIHEQQATELVAYIGIGSDTSERQQLDFSTGKVRHPGDQRQDPNIYDYCAAKTLYISDSDKRKYFDLNAQFFYGCGMEIGGFVSQRIKVISKPSKKKQSMKNTDCKYLCIASGTKVALFNRLRSQTVSTRYLHVEGNAFHASSTKWGAFTIHLFDDERGLQETDNFAVRDGFVYYGSVVKLVDSVTGIALPRLRIRKVDKQQVILDASCSEEPVSQLHKCAFQMIDNELVYLCLSHDKIIQHQATAINEHRHQINDGAAWTIISTDKAEYRFFEAMGQVANPISPCPVVGSLEVDGHGEASRVELHGRDFKPNLKVWFGATPVETTFRSEESLHCSIPPVSQVRNEQTHWMFTNRTTGDVEVPISLVRDDGVVYSSGLTFSYKSLER
Protein lin-12 D 29 Caenorhabditis Elegans , Synthetic Construct SPGNRTRKRRMINASVWMPPMENEEKNRK
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2007-12-21
Deposition Author(s): Kovall, R.A. , Wilson, J.J.