3BO4
A relaxed active site following exon ligation by a group i intron
PDB DOI: 10.2210/pdb3bo4/pdb
Classification: NUCLEAR PROTEIN/RNA Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2007-12-17 Deposition Author(s): Lipchock, S.V. , Strobel, S.A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.33 Å
A relaxed active site following exon ligation by a group i intron
Lipchock, S.V. , Strobel, S.A.
Primary Citation of Related Structures: 3BO4
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Group I intron P9 | b | 197 | NA | GGCCGUGUGCCUUGCGCCGGGAAACCACGCAAGGGAUGGUGUCAAAUUCGGCGAAACCUAAGCGCCCGCCCGGGCGUAUGGCAACGCCGAGCCAAGCUUCGCAGCCAUUGCACUCCGGCUGCGAUGAAGGUGUAGAGACUAGACGGCACCCACCUAAGGCAAACGCUAUGGUGAAGGCAUAGUCCAGGGAGUGGCGA |
| DNA/RNA (5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*A)-D(P*DG)-3') | c | 16 | NA | AAGCCACACAAACCAG |
| DNA/RNA (5'-R(*CP*A)-D(P*DU)-R(P*AP*CP*GP*GP*CP*C)-3') | d | 9 | NA | CATACGGCC |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| U1 small nuclear ribonucleoprotein A | A | 95 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | PETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMK |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2007-12-17 Deposition Author(s): Lipchock, S.V. , Strobel, S.A.