3B23
Crystal structure of thrombin-variegin complex: insights of a novel mechanism of inhibition and design of tunable thrombin inhibitors
PDB DOI: 10.2210/pdb3b23/pdb
Classification: HYDROLASE/HYDROLASE INHIBITOR Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2011-07-20 Deposition Author(s): Kini, R.M. , Koh, C.Y. , Kumar, S. , Swaminathan, K.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.4 Å
Crystal structure of thrombin-variegin complex: insights of a novel mechanism of inhibition and design of tunable thrombin inhibitors
Kini, R.M. , Koh, C.Y. , Kumar, S. , Swaminathan, K.
Primary Citation of Related Structures: 3B23
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Thrombin light chain | A | 36 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR |
| Thrombin heavy chain | B | 259 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE |
| Variegin | C | 32 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | SDQGDVAEPKMHKTAPPFDFEAIPEEYLDDES |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2011-07-20 Deposition Author(s): Kini, R.M. , Koh, C.Y. , Kumar, S. , Swaminathan, K.