PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

3B0V

Trna-dihydrouridine synthase from thermus thermophilus in complex with trna

PDB DOI: 10.2210/pdb3b0v/pdb

Classification: OXIDOREDUCTASE/RNA
Organism(s): Thermus Thermophilus

Deposited: 2011-06-14
Deposition Author(s): Nakamura, A. , Tanaka, I. , Tanaka, Y. , Yamashita, K. , Yao, M. , Yu, F.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.51 Å

3b0v
Literature

Trna-dihydrouridine synthase from thermus thermophilus in complex with trna

Nakamura, A. , Tanaka, I. , Tanaka, Y. , Yamashita, K. , Yao, M. , Yu, F.

Primary Citation of Related Structures: 3B0V


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
tRNA a 76 NA GCCGAGGUAGCUCAGUUGGUAGAGCAUGCGACUGAAAAUCGCAGUGUCGGCGGUUCGAUUCCGCCCCUCGGCACCA
tRNA b 76 NA GCCGAGGUAGCUCAGUUGGUAGAGCAUGCGACUGAAAAUCGCAGUGUCGGCGGUUCGAUUCCGCCCCUCGGCACCA

Proteins
Molecule Chains Sequence Length Organism Sequence
tRNA-dihydrouridine synthase C 363 Thermus Thermophilus MGSSHHHHHHSQDPLVPRGSHMLDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLLAFRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLKRVDGVMLGRAVYEDPFVLEEADRRVFGLPRRPSRLEVARRMRAYLEEEVLKGTPPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLMEEEVGEEGEKEKPGPRGQREAAPGPAREGV
tRNA-dihydrouridine synthase D 363 Thermus Thermophilus MGSSHHHHHHSQDPLVPRGSHMLDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLLAFRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLKRVDGVMLGRAVYEDPFVLEEADRRVFGLPRRPSRLEVARRMRAYLEEEVLKGTPPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLMEEEVGEEGEKEKPGPRGQREAAPGPAREGV
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2011-06-14
Deposition Author(s): Nakamura, A. , Tanaka, I. , Tanaka, Y. , Yamashita, K. , Yao, M. , Yu, F.