3A01
Crystal structure of aristaless and clawless homeodomains bound to dna
PDB DOI: 10.2210/pdb3a01/pdb
Classification: Gene Regulation/DNA Organism(s): Drosophila Melanogaster , Synthetic Construct
Deposited: 2009-02-28 Deposition Author(s): Kojima, T. , Miyazono, K. , Nagata, K. , Saigo, K. , Tanokura, M.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.7 Å
Crystal structure of aristaless and clawless homeodomains bound to dna
Kojima, T. , Miyazono, K. , Nagata, K. , Saigo, K. , Tanokura, M.
Primary Citation of Related Structures: 3A01
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Homeodomain-containing protein | A | 93 | Drosophila Melanogaster , Synthetic Construct | MARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRLMLS |
| Homeodomain-containing protein | E | 93 | Drosophila Melanogaster , Synthetic Construct | MARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRLMLS |
| Homeobox protein aristaless | B | 67 | Drosophila Melanogaster , Synthetic Construct | APKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKV |
| Homeobox protein aristaless | F | 67 | Drosophila Melanogaster , Synthetic Construct | APKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKV |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*GP*GP*CP*TP*TP*AP*AP*TP*TP*AP*AP*TP*TP*GP*CP*GP*G)-3' | c | 17 | NA | GGCTTAATTAATTGCGG |
| 5'-D(*GP*GP*CP*TP*TP*AP*AP*TP*TP*AP*AP*TP*TP*GP*CP*GP*G)-3' | g | 17 | NA | GGCTTAATTAATTGCGG |
| 5'-D(*CP*CP*GP*CP*AP*AP*TP*TP*AP*AP*TP*TP*AP*AP*GP*CP*C)-3' | d | 17 | NA | CCGCAATTAATTAAGCC |
| 5'-D(*CP*CP*GP*CP*AP*AP*TP*TP*AP*AP*TP*TP*AP*AP*GP*CP*C)-3' | h | 17 | NA | CCGCAATTAATTAAGCC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2009-02-28 Deposition Author(s): Kojima, T. , Miyazono, K. , Nagata, K. , Saigo, K. , Tanokura, M.