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3A01

Crystal structure of aristaless and clawless homeodomains bound to dna

PDB DOI: 10.2210/pdb3a01/pdb

Classification: Gene Regulation/DNA
Organism(s): Murine Hepatitis Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2009-02-28
Deposition Author(s): Kojima, T. , Miyazono, K. , Nagata, K. , Saigo, K. , Tanokura, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.7 Å

3a01
Literature

Crystal structure of aristaless and clawless homeodomains bound to dna

Kojima, T. , Miyazono, K. , Nagata, K. , Saigo, K. , Tanokura, M.

Primary Citation of Related Structures: 3A01


Proteins
Molecule Chains Sequence Length Organism Sequence
Homeodomain-containing protein A 93 Murine Hepatitis Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRLMLS
Homeodomain-containing protein E 93 Murine Hepatitis Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRLMLS
Homeobox protein aristaless B 67 Murine Hepatitis Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) APKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKV
Homeobox protein aristaless F 67 Murine Hepatitis Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) APKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKV

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*GP*GP*CP*TP*TP*AP*AP*TP*TP*AP*AP*TP*TP*GP*CP*GP*G)-3' c 17 NA GGCTTAATTAATTGCGG
5'-D(*GP*GP*CP*TP*TP*AP*AP*TP*TP*AP*AP*TP*TP*GP*CP*GP*G)-3' g 17 NA GGCTTAATTAATTGCGG
5'-D(*CP*CP*GP*CP*AP*AP*TP*TP*AP*AP*TP*TP*AP*AP*GP*CP*C)-3' d 17 NA CCGCAATTAATTAAGCC
5'-D(*CP*CP*GP*CP*AP*AP*TP*TP*AP*AP*TP*TP*AP*AP*GP*CP*C)-3' h 17 NA CCGCAATTAATTAAGCC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2009-02-28
Deposition Author(s): Kojima, T. , Miyazono, K. , Nagata, K. , Saigo, K. , Tanokura, M.