PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

2ZL4

Crystal structure of h.pylori clpp s99a in complex with the peptide aaaa

PDB DOI: 10.2210/pdb2zl4/pdb

Classification: HYDROLASE
Organism(s): Helicobacter Pylori , Synthetic Construct

Deposited: 2008-04-02
Deposition Author(s): Kim, D.Y. , Kim, K.K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.5 Å

2zl4
Literature

Crystal structure of h.pylori clpp s99a in complex with the peptide aaaa

Kim, D.Y. , Kim, K.K.

Primary Citation of Related Structures: 2ZL4


Proteins
Molecule Chains Sequence Length Organism Sequence
ATP-dependent Clp protease proteolytic subunit A 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit B 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit C 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit D 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit E 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit F 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit G 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit H 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit I 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit J 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit K 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit L 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit M 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit N 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
Peptide substrate AAAA O 4 Helicobacter Pylori , Synthetic Construct AAAA
Peptide substrate AAAA P 4 Helicobacter Pylori , Synthetic Construct AAAA
Peptide substrate AAAA Q 4 Helicobacter Pylori , Synthetic Construct AAAA
Peptide substrate AAAA R 4 Helicobacter Pylori , Synthetic Construct AAAA
Peptide substrate AAAA S 4 Helicobacter Pylori , Synthetic Construct AAAA
Peptide substrate AAAA T 4 Helicobacter Pylori , Synthetic Construct AAAA
Peptide substrate AAAA U 4 Helicobacter Pylori , Synthetic Construct AAAA
Peptide substrate AAAA V 4 Helicobacter Pylori , Synthetic Construct AAAA
Peptide substrate AAAA W 4 Helicobacter Pylori , Synthetic Construct AAAA
Peptide substrate AAAA X 4 Helicobacter Pylori , Synthetic Construct AAAA
Peptide substrate AAAA Y 4 Helicobacter Pylori , Synthetic Construct AAAA
Peptide substrate AAAA Z 4 Helicobacter Pylori , Synthetic Construct AAAA
Peptide substrate AAAA 1 4 Helicobacter Pylori , Synthetic Construct AAAA
Peptide substrate AAAA 2 4 Helicobacter Pylori , Synthetic Construct AAAA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2008-04-02
Deposition Author(s): Kim, D.Y. , Kim, K.K.