2V0G
Leucyl-trna synthetase from thermus thermophilus complexed with a trna(leu) transcript with 5-fluoro-1,3-dihydro-1-hydroxy-2,1- benzoxaborole (an2690) forming an adduct to the ribose of adenosine- 76 in the enzyme editing site.
PDB DOI: 10.2210/pdb2v0g/pdb
Classification: LIGASE Organism(s): Thermus Thermophilus , Synthetic Construct
Deposited: 2007-05-14 Deposition Author(s): Akama, T. , Alley, M.R.K. , Baker, S. , Benkovic, S.J. , Crepin, T. , Cusack, S. , Hernandez, V. , Mao, W. , Martinis, S.A. , Plattner, J. , Rock, F. , Shapiro, L. , Tukalo, M. , Yaremchuk, A. , Zhang, Y. , Zhou, H.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.5 Å
Leucyl-trna synthetase from thermus thermophilus complexed with a trna(leu) transcript with 5-fluoro-1,3-dihydro-1-hydroxy-2,1- benzoxaborole (an2690) forming an adduct to the ribose of adenosine- 76 in the enzyme editing site.
Akama, T. , Alley, M.R.K. , Baker, S. , Benkovic, S.J. , Crepin, T. , Cusack, S. , Hernandez, V. , Mao, W. , Martinis, S.A. , Plattner, J. , Rock, F. , Shapiro, L. , Tukalo, M. , Yaremchuk, A. , Zhang, Y. , Zhou, H.
Primary Citation of Related Structures: 2V0G
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| AMINOACYL-TRNA SYNTHETASE | A | 878 | Thermus Thermophilus , Synthetic Construct | MEKYNPHAIEAKWQRFWEEKGFMKAKDLPGGRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAALKFGVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYRAKGLVNWCPKCQTVLANEQVVEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLEGLNWPEKVKAMQRAWIGRSEGAEILFPVEGKEVRIPVFTTRPDTLFGATFLVLAPEHPLTLELAAPEKREEVLAYVEAAKRKTEIERQAEGREKTGVFLGAYALNPATGERIPIWTADYVLFGYGTGAIMAVPAHDQRDYEFARKFGLPIKKVIERPGEPLPEPLERAYEEPGIMVNSGPFDGTESEEGKRKVIAWLEEKGLGKGRVTYRLRDWLISRQRYWGTPIPMVHCEACGVVPVPEEELPVLLPDLKDVEDIRPKGKSPLEAHPEFYETTCPKCGGPAKRDTDTMDTFFDSSWYYLRYTDPHNDRLPFDPEKANAWMPVDQYIGGVEHAVLHLLYSRFFTKFLHDLGMVKVEEPFQGLFTQGMVLAWTDFGPVEVEGSVVRLPEPTRIRLEIPESALSLEDVRKMGAELRPHEDGTLHLWKPAVMSKSKGNGVMVGPFVKEQGADIARITILFAAPPENEMVWTEEGVQGAWRFLNRIYRRVAEDREALLETSGVFQAEALEGKDRELYGKLHETLKKVTEDLEALRFNTAIAALMEFLNALYEYRKDRPVTPVYRTAIRYYLQMLFPFAPHLAEELWHWFWPDSLFEAGWPELDEKALEKDVVEVAVQVNGRVRGTIHIPKDAPLEVARAEALKVRNVRAHLEGKEVVKEIYVPGKILNLVVRG |
| AMINOACYL-TRNA SYNTHETASE | D | 878 | Thermus Thermophilus , Synthetic Construct | MEKYNPHAIEAKWQRFWEEKGFMKAKDLPGGRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAALKFGVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYRAKGLVNWCPKCQTVLANEQVVEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLEGLNWPEKVKAMQRAWIGRSEGAEILFPVEGKEVRIPVFTTRPDTLFGATFLVLAPEHPLTLELAAPEKREEVLAYVEAAKRKTEIERQAEGREKTGVFLGAYALNPATGERIPIWTADYVLFGYGTGAIMAVPAHDQRDYEFARKFGLPIKKVIERPGEPLPEPLERAYEEPGIMVNSGPFDGTESEEGKRKVIAWLEEKGLGKGRVTYRLRDWLISRQRYWGTPIPMVHCEACGVVPVPEEELPVLLPDLKDVEDIRPKGKSPLEAHPEFYETTCPKCGGPAKRDTDTMDTFFDSSWYYLRYTDPHNDRLPFDPEKANAWMPVDQYIGGVEHAVLHLLYSRFFTKFLHDLGMVKVEEPFQGLFTQGMVLAWTDFGPVEVEGSVVRLPEPTRIRLEIPESALSLEDVRKMGAELRPHEDGTLHLWKPAVMSKSKGNGVMVGPFVKEQGADIARITILFAAPPENEMVWTEEGVQGAWRFLNRIYRRVAEDREALLETSGVFQAEALEGKDRELYGKLHETLKKVTEDLEALRFNTAIAALMEFLNALYEYRKDRPVTPVYRTAIRYYLQMLFPFAPHLAEELWHWFWPDSLFEAGWPELDEKALEKDVVEVAVQVNGRVRGTIHIPKDAPLEVARAEALKVRNVRAHLEGKEVVKEIYVPGKILNLVVRG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2007-05-14 Deposition Author(s): Akama, T. , Alley, M.R.K. , Baker, S. , Benkovic, S.J. , Crepin, T. , Cusack, S. , Hernandez, V. , Mao, W. , Martinis, S.A. , Plattner, J. , Rock, F. , Shapiro, L. , Tukalo, M. , Yaremchuk, A. , Zhang, Y. , Zhou, H.