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2O54

Structure of e. coli topoisomerase iii in complex with an 8-base single stranded oligonucleotide. frozen in glycerol at ph 7.0

PDB DOI: 10.2210/pdb2o54/pdb

Classification: ISOMERASE/DNA
Organism(s): Escherichia Coli , Synthetic Construct

Deposited: 2006-12-05
Deposition Author(s): Changela, A. , Digate, R.J. , Mondragon, A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.5 Å

2o54
Literature

Structure of e. coli topoisomerase iii in complex with an 8-base single stranded oligonucleotide. frozen in glycerol at ph 7.0

Changela, A. , Digate, R.J. , Mondragon, A.

Primary Citation of Related Structures: 2O54


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3' c 8 NA CGCAACTT
5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3' d 8 NA CGCAACTT

Proteins
Molecule Chains Sequence Length Organism Sequence
DNA topoisomerase 3 A 659 Escherichia Coli , Synthetic Construct MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQPDAYDSRYARWNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAGDPDREGQLLVDEVLDYLQLAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAVMNAISVHAPDLLPQPVVDPDIRNRCWDDKKVDAHHAIIPTARSSAINLTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLLGSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRGFLTKKGRYIHSTDAGKALFHSLPEMATRPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIDQAKRTPVRQFRGIVAPGSGGSADKKKAAPRKRSAKKSPPADEVGSGAIAHHHHHH
DNA topoisomerase 3 B 659 Escherichia Coli , Synthetic Construct MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQPDAYDSRYARWNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAGDPDREGQLLVDEVLDYLQLAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAVMNAISVHAPDLLPQPVVDPDIRNRCWDDKKVDAHHAIIPTARSSAINLTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLLGSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRGFLTKKGRYIHSTDAGKALFHSLPEMATRPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIDQAKRTPVRQFRGIVAPGSGGSADKKKAAPRKRSAKKSPPADEVGSGAIAHHHHHH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2006-12-05
Deposition Author(s): Changela, A. , Digate, R.J. , Mondragon, A.