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2NY7
Hiv-1 gp120 envelope glycoprotein complexed with the broadly neutralizing cd4-binding-site antibody b12
PDB DOI: 10.2210/pdb2ny7/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Salmonella Enterica , Anoxybacillus Sp. Lm18-11
Deposited: 2006-11-20 Deposition Author(s): Arthos, J. , Burton, D.R. , Dey, B. , Dimitrov, D.S. , Hessell, A.J. , Kwong, P.D. , Nabel, G.J. , Sodroski, J. , Van Ryk, D. , Wyatt, R. , Xiang, S.H. , Xu, L. , Yang, X. , Zhang, M.Y. , Zhou, T. , Zwick, M.B.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.3 Å
Hiv-1 gp120 envelope glycoprotein complexed with the broadly neutralizing cd4-binding-site antibody b12
Arthos, J. , Burton, D.R. , Dey, B. , Dimitrov, D.S. , Hessell, A.J. , Kwong, P.D. , Nabel, G.J. , Sodroski, J. , Van Ryk, D. , Wyatt, R. , Xiang, S.H. , Xu, L. , Yang, X. , Zhang, M.Y. , Zhou, T. , Zwick, M.B.
Primary Citation of Related Structures: 2NY7
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| ENVELOPE GLYCOPROTEIN GP120 | G | 317 | Salmonella Enterica , Anoxybacillus Sp. Lm18-11 | EVVLVNVTENFNWCKNDMVEQMHEDICSLWDQSLKPCVKLTPLCVGAGSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSSQLLLNGSLAEEEVVIRSCNFTDNAKTIIVQLNTSVEINCTGAGHCNIARAKWNNTLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHWFNCGGEFFYCNSTQLFNSTWFNSTWSTEGSNNTEGSDTITLPCRIKQIINMWCKVGKMMYAPPISGQIRCSSNITGLLLTRDGGNSNNESEIFRPGGGDMRDNWRSELYKYKVVKIE |
| ANTIBODY b12, HEAVY CHAIN | H | 230 | Salmonella Enterica , Anoxybacillus Sp. Lm18-11 | QVQLVQSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSC |
| ANTIBODY b12, LIGHT CHAIN | L | 215 | Salmonella Enterica , Anoxybacillus Sp. Lm18-11 | EIVLTQSPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASSYTFGQGTKLERKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2006-11-20 Deposition Author(s): Arthos, J. , Burton, D.R. , Dey, B. , Dimitrov, D.S. , Hessell, A.J. , Kwong, P.D. , Nabel, G.J. , Sodroski, J. , Van Ryk, D. , Wyatt, R. , Xiang, S.H. , Xu, L. , Yang, X. , Zhang, M.Y. , Zhou, T. , Zwick, M.B.