2NMV
Damage detection by the uvrabc pathway: crystal structure of uvrb bound to fluorescein-adducted dna
PDB DOI: 10.2210/pdb2nmv/pdb
Classification: HYDROLASE/DNA Organism(s): Tomato Spotted Wilt Virus (Strain Bulgarian L3) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2006-10-23 Deposition Author(s): Barrett, T.E. , Eryilmaz, J. , Geddes, S. , Waters, T.R.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.95 Å
Damage detection by the uvrabc pathway: crystal structure of uvrb bound to fluorescein-adducted dna
Barrett, T.E. , Eryilmaz, J. , Geddes, S. , Waters, T.R.
Primary Citation of Related Structures: 2NMV
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(P*TP*TP*TP*TP*T)-3' | d | 5 | NA | TTTTT |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| UvrABC system protein B | A | 661 | Tomato Spotted Wilt Virus (Strain Bulgarian L3) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MKDRFELVSKYQPQGDQPKAIEKLVKGIQEGKKHQTLLGATGTGKTFTVSNLIKEVNKPTLVIAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEIDKLRHSATSALFERRDVIIIASVSCIYGLGSPEEYREMVVSLRTEMEIERNELLRKLVDIQYARNDIDFQRGTFRVRGDVVEIFPASRDEHCVRVEFFGDEIERIREVDALTGEILGDRDHVAIFPASHFVTRAEKMEKAIQNIEKELEEQLKVMHENGKLLEAQRLEQRTRYDLEMMREMGFCSGIENYSRHLTLRPPGSTPYTLLDYFPDDFMIVVDESHVTIPQVRGMFNGDQARKQVLVDHGFRLPSALDNRPLRFEEFEKHMHNIVYVSATPGPYEIEHTDEMVEQIIRPTGLLDPLIDVRPIEGQIDDLIGEIQARIERNERVLVTTLTKKMSEDLTDYLKEIGIKVNYLHSEIKTLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNAEGRVIMYADKITKSMEIAINETKRRREQQERFNEEHGITPKTINKEIRDVIRATVAAEDKAEYKTKAAPKLSKMTKKERQKVVEQMEHEMKEAAKALDFERAAELRDLLLELKAEG |
| UvrABC system protein B | B | 38 | Tomato Spotted Wilt Virus (Strain Bulgarian L3) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | KERQKVVEQMEHEMKEAAKALDFERAAELRDLLLELKA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2006-10-23 Deposition Author(s): Barrett, T.E. , Eryilmaz, J. , Geddes, S. , Waters, T.R.