PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

2ISO

Ternary complex of dna polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-difluoromethylene triphosphate

PDB DOI: 10.2210/pdb2iso/pdb

Classification: TRANSFERASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2006-10-18
Deposition Author(s): Beard, W.A. , Kashemirov, B.A. , Martinek, V. , Sucato, C.A. , Upton, T.G. , Xiang, Y.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.1 Å

2iso
Literature

Ternary complex of dna polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-difluoromethylene triphosphate

Beard, W.A. , Kashemirov, B.A. , Martinek, V. , Sucato, C.A. , Upton, T.G. , Xiang, Y.

Primary Citation of Related Structures: 2ISO


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3' t 16 NA CCGACCGCGCATCAGC
5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3' p 10 NA GCTGATGCGC
5'-D(P*GP*TP*CP*GP*G)-3' d 5 NA GTCGG

Proteins
Molecule Chains Sequence Length Organism Sequence
Polymerase (DNA directed), beta A 335 Homo Sapiens , Synthetic Construct MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2006-10-18
Deposition Author(s): Beard, W.A. , Kashemirov, B.A. , Martinek, V. , Sucato, C.A. , Upton, T.G. , Xiang, Y.