Crystal structure of a murine fab in complex with an 11 residue peptide derived from staphylococcal nuclease
PDB DOI: 10.2210/pdb2gsi/pdb
Classification: IMMUNE SYSTEM Organism(s): Mus Musculus , Synthetic Construct
Deposited: 2006-04-26 Deposition Author(s): Amzel, L.M. , Armstrong, A.A.
Crystal structure of a murine fab in complex with an 11 residue peptide derived from staphylococcal nuclease
Primary Citation of Related Structures: 2GSI
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence | 
| Immunoglobulin (kappa) light chain | A | 215 | Mus Musculus , Synthetic Construct | DIVLTQSPASLAVSLGQPATISCGASKSVRTSGYSYMDWNQQKPGQPPRRLIYLVSNLESGVPARFSGSGSGTDFTLNIHPVEEEDAATYYCSHIRELPRSSGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 
| Immunoglobulin (kappa) light chain | C | 215 | Mus Musculus , Synthetic Construct | DIVLTQSPASLAVSLGQPATISCGASKSVRTSGYSYMDWNQQKPGQPPRRLIYLVSNLESGVPARFSGSGSGTDFTLNIHPVEEEDAATYYCSHIRELPRSSGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 
| Immunoglobulin (kappa) light chain | E | 215 | Mus Musculus , Synthetic Construct | DIVLTQSPASLAVSLGQPATISCGASKSVRTSGYSYMDWNQQKPGQPPRRLIYLVSNLESGVPARFSGSGSGTDFTLNIHPVEEEDAATYYCSHIRELPRSSGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 
| Immunoglobulin (kappa) light chain | G | 215 | Mus Musculus , Synthetic Construct | DIVLTQSPASLAVSLGQPATISCGASKSVRTSGYSYMDWNQQKPGQPPRRLIYLVSNLESGVPARFSGSGSGTDFTLNIHPVEEEDAATYYCSHIRELPRSSGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 
| Immunoglobulin (gamma) heavy chain (VH + CH1 fragment) | B | 221 | Mus Musculus , Synthetic Construct | VQLQQSGAELVRSGASVKLSCTASGFNIKDYYMYWVKLRPEQGLEWIGWIDPENGDTEYVPTFQGKVTMTADTSSNTAYLQLSSLTSEDTAVYYCNAGVITMMGYQAMDYWGQGTTVTTSSAKTTPPSVYPLAPGTAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPR | 
| Immunoglobulin (gamma) heavy chain (VH + CH1 fragment) | D | 221 | Mus Musculus , Synthetic Construct | VQLQQSGAELVRSGASVKLSCTASGFNIKDYYMYWVKLRPEQGLEWIGWIDPENGDTEYVPTFQGKVTMTADTSSNTAYLQLSSLTSEDTAVYYCNAGVITMMGYQAMDYWGQGTTVTTSSAKTTPPSVYPLAPGTAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPR | 
| Immunoglobulin (gamma) heavy chain (VH + CH1 fragment) | F | 221 | Mus Musculus , Synthetic Construct | VQLQQSGAELVRSGASVKLSCTASGFNIKDYYMYWVKLRPEQGLEWIGWIDPENGDTEYVPTFQGKVTMTADTSSNTAYLQLSSLTSEDTAVYYCNAGVITMMGYQAMDYWGQGTTVTTSSAKTTPPSVYPLAPGTAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPR | 
| Immunoglobulin (gamma) heavy chain (VH + CH1 fragment) | H | 221 | Mus Musculus , Synthetic Construct | VQLQQSGAELVRSGASVKLSCTASGFNIKDYYMYWVKLRPEQGLEWIGWIDPENGDTEYVPTFQGKVTMTADTSSNTAYLQLSSLTSEDTAVYYCNAGVITMMGYQAMDYWGQGTTVTTSSAKTTPPSVYPLAPGTAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPR | 
| Thermonuclease | X | 11 | Mus Musculus , Synthetic Construct | TKHPKKGVEKY | 
| Thermonuclease | Z | 11 | Mus Musculus , Synthetic Construct | TKHPKKGVEKY | 
| Thermonuclease | W | 11 | Mus Musculus , Synthetic Construct | TKHPKKGVEKY | 
| Thermonuclease | Y | 11 | Mus Musculus , Synthetic Construct | TKHPKKGVEKY | 
Method: X-RAY DIFFRACTION
Deposited Date: 2006-04-26 Deposition Author(s): Amzel, L.M. , Armstrong, A.A.
 
                  