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FASTA Sequence PDB Format mmCIF Format
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2F8T

Crystal structure of aa-ago with externally-bound sirna

PDB DOI: 10.2210/pdb2f8t/pdb

Classification: RNA BINDING PROTEIN/RNA
Organism(s): Aquifex Aeolicus , Synthetic Construct

Deposited: 2005-12-03
Deposition Author(s): Chen, H.Y. , Patel, D.J. , Yuan, Y.R.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.1 Å

2f8t
Literature

Crystal structure of aa-ago with externally-bound sirna

Chen, H.Y. , Patel, D.J. , Yuan, Y.R.

Primary Citation of Related Structures: 2F8T


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
26-MER c 26 NA AGACAGCAUGCAUGCAUGCUGUCUUU
26-MER d 26 NA AGACAGCAUGCAUGCAUGCUGUCUUU

Proteins
Molecule Chains Sequence Length Organism Sequence
Argonaute protein A 706 Aquifex Aeolicus , Synthetic Construct MGKEALLNLYRIEYRPKDTTFTVFKPTHEIQKEKLNKVRWRVFLQTGLPTFRREDEFWCAGKVEKDTLYLTLSNGEIVELKRVGEEEFRGFQNERECQELFRDFLTKTKVKDKFISDFYKKFRDKITVQGKNRKIALIPEVNEKVLKSEEGYFLLHLDLKFRIQPFETLQTLLERNDFNPKRIRVKPIGIDFVGRVQDVFKAKEKGEEFFRLCMERSTHKSSKKAWEELLKNRELREKAFLVVLEKGYTYPATILKPVLTYENLEDEERNEVADIVRMEPGKRLNLIRYILRRYVKALRDYGWYISPEEERAKGKLNFKDTVLDAKGKNTKVITNLRKFLELCRPFVKKDVLSVEIISVSVYKKLEWRKEEFLKELINFLKNKGIKLKIKGKSLILAQTREEAKEKLIPVINKIKDVDLVIVFLEEYPKVDPYKSFLLYDFVKRELLKKMIPSQVILNRTLKNENLKFVLLNVAEQVLAKTGNIPYKLKEIEGKVDAFVGIDISRITRDGKTVNAVAFTKIFNSKGELVRYYLTSYPAFGEKLTEKAIGDVFSLLEKLGFKKGSKIVVHRDGRLYRDEVAAFKKYGELYGYSLELLEIIKRNNPRFFSNEKFIKGYFYKLSEDSVILATYNQVYEGTHQPIKVRKVYGELPVEVLCSQILSLTLMNYSSFQPIKLPATVHYSDKITKLMLRGIEPIKKEGDIMYWL
Argonaute protein B 706 Aquifex Aeolicus , Synthetic Construct MGKEALLNLYRIEYRPKDTTFTVFKPTHEIQKEKLNKVRWRVFLQTGLPTFRREDEFWCAGKVEKDTLYLTLSNGEIVELKRVGEEEFRGFQNERECQELFRDFLTKTKVKDKFISDFYKKFRDKITVQGKNRKIALIPEVNEKVLKSEEGYFLLHLDLKFRIQPFETLQTLLERNDFNPKRIRVKPIGIDFVGRVQDVFKAKEKGEEFFRLCMERSTHKSSKKAWEELLKNRELREKAFLVVLEKGYTYPATILKPVLTYENLEDEERNEVADIVRMEPGKRLNLIRYILRRYVKALRDYGWYISPEEERAKGKLNFKDTVLDAKGKNTKVITNLRKFLELCRPFVKKDVLSVEIISVSVYKKLEWRKEEFLKELINFLKNKGIKLKIKGKSLILAQTREEAKEKLIPVINKIKDVDLVIVFLEEYPKVDPYKSFLLYDFVKRELLKKMIPSQVILNRTLKNENLKFVLLNVAEQVLAKTGNIPYKLKEIEGKVDAFVGIDISRITRDGKTVNAVAFTKIFNSKGELVRYYLTSYPAFGEKLTEKAIGDVFSLLEKLGFKKGSKIVVHRDGRLYRDEVAAFKKYGELYGYSLELLEIIKRNNPRFFSNEKFIKGYFYKLSEDSVILATYNQVYEGTHQPIKVRKVYGELPVEVLCSQILSLTLMNYSSFQPIKLPATVHYSDKITKLMLRGIEPIKKEGDIMYWL
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2005-12-03
Deposition Author(s): Chen, H.Y. , Patel, D.J. , Yuan, Y.R.