2CZJ
Crystal structure of the trna domain of tmrna from thermus thermophilus hb8
PDB DOI: 10.2210/pdb2czj/pdb
Classification: RNA BINDING PROTEIN/RNA Organism(s): Scytalidium Thermophilum , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2005-07-13 Deposition Author(s): Bessho, Y. , Murayama, K. , Riken Structural Genomics/Proteomics Initiative (Rsgi) , Sekine, S. , Shibata, R. , Shirouzu, M. , Yokoyama, S.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.01 Å
Crystal structure of the trna domain of tmrna from thermus thermophilus hb8
Bessho, Y. , Murayama, K. , Riken Structural Genomics/Proteomics Initiative (Rsgi) , Sekine, S. , Shibata, R. , Shirouzu, M. , Yokoyama, S.
Primary Citation of Related Structures: 2CZJ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| SsrA-binding protein | A | 123 | Scytalidium Thermophilum , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAPVLENRRARHDYEILETYEAGIALKGTEVKSLRAGKVDFTGSFARFEDGELYLENLYIAPYEKGSYANVDPRRKRKLLLHKHELRRLLGKVEQKGLTLVPLKIYFNERGYAKVLLGLARGK |
| SsrA-binding protein | C | 123 | Scytalidium Thermophilum , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAPVLENRRARHDYEILETYEAGIALKGTEVKSLRAGKVDFTGSFARFEDGELYLENLYIAPYEKGSYANVDPRRKRKLLLHKHELRRLLGKVEQKGLTLVPLKIYFNERGYAKVLLGLARGK |
| SsrA-binding protein | E | 123 | Scytalidium Thermophilum , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAPVLENRRARHDYEILETYEAGIALKGTEVKSLRAGKVDFTGSFARFEDGELYLENLYIAPYEKGSYANVDPRRKRKLLLHKHELRRLLGKVEQKGLTLVPLKIYFNERGYAKVLLGLARGK |
| SsrA-binding protein | G | 123 | Scytalidium Thermophilum , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAPVLENRRARHDYEILETYEAGIALKGTEVKSLRAGKVDFTGSFARFEDGELYLENLYIAPYEKGSYANVDPRRKRKLLLHKHELRRLLGKVEQKGLTLVPLKIYFNERGYAKVLLGLARGK |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| tmRNA (63-MER) | b | 63 | NA | GGGGGUGAAACGGUCUCGACAGGGGUUCGCCUUUGGACGUGGGUUCGACUCCCACCACCUCCA |
| tmRNA (63-MER) | d | 63 | NA | GGGGGUGAAACGGUCUCGACAGGGGUUCGCCUUUGGACGUGGGUUCGACUCCCACCACCUCCA |
| tmRNA (63-MER) | f | 63 | NA | GGGGGUGAAACGGUCUCGACAGGGGUUCGCCUUUGGACGUGGGUUCGACUCCCACCACCUCCA |
| tmRNA (63-MER) | h | 63 | NA | GGGGGUGAAACGGUCUCGACAGGGGUUCGCCUUUGGACGUGGGUUCGACUCCCACCACCUCCA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2005-07-13 Deposition Author(s): Bessho, Y. , Murayama, K. , Riken Structural Genomics/Proteomics Initiative (Rsgi) , Sekine, S. , Shibata, R. , Shirouzu, M. , Yokoyama, S.