2B4C
Crystal structure of hiv-1 jr-fl gp120 core protein containing the third variable region (v3) complexed with cd4 and the x5 antibody
PDB DOI: 10.2210/pdb2b4c/pdb
Classification: Viral protein/Immune system Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1
Deposited: 2005-09-23 Deposition Author(s): Dimitrov, D.S. , Huang, C. , Korber, B. , Kwong, P.D. , Majeed, S. , Montabana, E. , Sodroski, J. , Stanfield, R.L. , Tang, M. , Wilson, I.A. , Wyatt, R. , Zhang, M.Y.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.3 Å
Crystal structure of hiv-1 jr-fl gp120 core protein containing the third variable region (v3) complexed with cd4 and the x5 antibody
Dimitrov, D.S. , Huang, C. , Korber, B. , Kwong, P.D. , Majeed, S. , Montabana, E. , Sodroski, J. , Stanfield, R.L. , Tang, M. , Wilson, I.A. , Wyatt, R. , Zhang, M.Y.
Primary Citation of Related Structures: 2B4C
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| envelope glycoprotein | G | 344 | Homo Sapiens , Human Immunodeficiency Virus 1 | GARSEVVLENVTEHFNMWKNDMVEQMQEDIISLWDQSLKPCVKLTPLCVGAGSCDTSVITQACPKISFEPIPIHYCAPAGFAILKCNDKTFNGKGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSDNFTNNAKTIIVQLKESVEINCTRPNQNTRKSIHIGPGRAFYTTGEIIGDIRQAHCNISRAKWNDTLKQIVIKLREQFENKTIVFNHSSGGDPEIVMHSFNCGGEFFYCNSAQLFNSTWNNNTEGSNNTEGNTITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGINENGTEIFRPGGGDMRDNWRSELYKYKVVKIE |
| T-cell surface glycoprotein CD4 | C | 181 | Homo Sapiens , Human Immunodeficiency Virus 1 | KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK |
| anti-HIV-1 gp120 immunoglobulin X5 light chain | L | 215 | Homo Sapiens , Human Immunodeficiency Virus 1 | ELVLTQSPGTLSLSAGERATLSCRASQSVSSGSLAWYQQKPGQAPRLLIYGASTRATGIPDRFSGSGSGTDFTLTIGRLEPEDLAVYYCQQYGTSPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSRDSTYSLGSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| anti-HIV-1 gp120 immunoglobulin X5 heavy chain | H | 235 | Homo Sapiens , Human Immunodeficiency Virus 1 | EVQLLEQSGAEVKKPGSSVQVSCKASGGTFSMYGFNWVRQAPGHGLEWMGGIIPIFGTSNYAQKFRGRVTFTADQATSTAYMELTNLRSDDTAVYYCARDFGPDWEDGDSYDGSGRGFFDFWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2005-09-23 Deposition Author(s): Dimitrov, D.S. , Huang, C. , Korber, B. , Kwong, P.D. , Majeed, S. , Montabana, E. , Sodroski, J. , Stanfield, R.L. , Tang, M. , Wilson, I.A. , Wyatt, R. , Zhang, M.Y.