1ZRC
4 crystal structures of cap-dna with all base-pair substitutions at position 6, cap-icap38 dna
PDB DOI: 10.2210/pdb1zrc/pdb
Classification: GENE REGULATION/DNA Organism(s): Escherichia Coli , Synthetic Construct
Deposited: 2005-05-19 Deposition Author(s): Berman, H.M. , Napoli, A.A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.8 Å
4 crystal structures of cap-dna with all base-pair substitutions at position 6, cap-icap38 dna
Primary Citation of Related Structures: 1ZRC
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*AP*TP*TP*TP*CP*GP*AP*AP*AP*AP*AP*TP*GP*TP*GP*AP*T)-3' | w | 17 | NA | ATTTCGAAAAATGTGAT |
| 5'-D(*AP*TP*TP*TP*CP*GP*AP*AP*AP*AP*AP*TP*GP*TP*GP*AP*T)-3' | y | 17 | NA | ATTTCGAAAAATGTGAT |
| 5'-D(*CP*TP*AP*GP*AP*TP*CP*AP*CP*AP*TP*TP*TP*TP*TP*CP*GP*AP*AP*AP*T)-3' | x | 21 | NA | CTAGATCACATTTTTCGAAAT |
| 5'-D(*CP*TP*AP*GP*AP*TP*CP*AP*CP*AP*TP*TP*TP*TP*TP*CP*GP*AP*AP*AP*T)-3' | z | 21 | NA | CTAGATCACATTTTTCGAAAT |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Catabolite gene activator | A | 209 | Escherichia Coli , Synthetic Construct | VLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR |
| Catabolite gene activator | B | 209 | Escherichia Coli , Synthetic Construct | VLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2005-05-19 Deposition Author(s): Berman, H.M. , Napoli, A.A.