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FASTA Sequence PDB Format mmCIF Format
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1YVP

Ro autoantigen complexed with rnas

PDB DOI: 10.2210/pdb1yvp/pdb

Classification: RNA BINDING PROTEIN/RNA
Organism(s): Mucilaginibacter Paludis Dsm 18603 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2005-02-16
Deposition Author(s): Fu, C. , Fuchs, G. , Reinisch, K.M. , Stein, A.J. , Wolin, S.L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.2 Å

1yvp
Literature

Ro autoantigen complexed with rnas

Fu, C. , Fuchs, G. , Reinisch, K.M. , Stein, A.J. , Wolin, S.L.

Primary Citation of Related Structures: 1YVP


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
Y RNA sequence, first strand c 10 NA GCUGGUCCGA
Y RNA sequence, first strand e 10 NA GCUGGUCCGA
Y RNA sequence, first strand g 10 NA GCUGGUCCGA
Y RNA sequence, first strand h 10 NA GCUGGUCCGA
Y RNA sequence, second strand d 10 NA UUGACUAGCC
Y RNA sequence, second strand f 10 NA UUGACUAGCC

Proteins
Molecule Chains Sequence Length Organism Sequence
60-kDa SS-A/Ro ribonucleoprotein A 538 Mucilaginibacter Paludis Dsm 18603 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MEATMDQTQPLNEKQVPNSEGCYVWQVSDMNRLRRFLCFGSEGGTYYIEEKKLGQENAEALLRLIEDGKGCEVVQEIKTFSQEGRAAKQEPTLFALAVCSQCSDIKTKQAAFRAVPEVCRIPTHLFTFIQFKKDLKEGMKCGMWGRALRKAVSDWYNTKDALNLAMAVTKYKQRNGWSHKDLLRLSHIKPANEGLTMVAKYVSKGWKEVQEAYKEKELSPETEKVLKYLEATERVKRTKDELEIIHLIDEYRLVREHLLTIHLKSKEIWKSLLQDMPLTALLRNLGKMTADSVLAPASSEVSSVCERLTNEKLLKKARIHPFHILVALETYKKGHGNRGKLRWIPDTSIVEALDNAFYKSFKLVEPTGKRFLLAIDVSASMNQRVLGSILNASVVAAAMCMLVARTEKDSHMVAFSDEMLPCPITVNMLLHEVVEKMSDITMGSTDCALPMLWAQKTNTAADIFIVFTDCETNVEDVHPATALKQYREKMGIPAKLIVCAMTSNGFSIADPDDRGMLDICGFDSGALDVIRNFTLDLI
60-kDa SS-A/Ro ribonucleoprotein B 538 Mucilaginibacter Paludis Dsm 18603 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MEATMDQTQPLNEKQVPNSEGCYVWQVSDMNRLRRFLCFGSEGGTYYIEEKKLGQENAEALLRLIEDGKGCEVVQEIKTFSQEGRAAKQEPTLFALAVCSQCSDIKTKQAAFRAVPEVCRIPTHLFTFIQFKKDLKEGMKCGMWGRALRKAVSDWYNTKDALNLAMAVTKYKQRNGWSHKDLLRLSHIKPANEGLTMVAKYVSKGWKEVQEAYKEKELSPETEKVLKYLEATERVKRTKDELEIIHLIDEYRLVREHLLTIHLKSKEIWKSLLQDMPLTALLRNLGKMTADSVLAPASSEVSSVCERLTNEKLLKKARIHPFHILVALETYKKGHGNRGKLRWIPDTSIVEALDNAFYKSFKLVEPTGKRFLLAIDVSASMNQRVLGSILNASVVAAAMCMLVARTEKDSHMVAFSDEMLPCPITVNMLLHEVVEKMSDITMGSTDCALPMLWAQKTNTAADIFIVFTDCETNVEDVHPATALKQYREKMGIPAKLIVCAMTSNGFSIADPDDRGMLDICGFDSGALDVIRNFTLDLI
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2005-02-16
Deposition Author(s): Fu, C. , Fuchs, G. , Reinisch, K.M. , Stein, A.J. , Wolin, S.L.