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1UBD

Co-crystal structure of human yy1 zinc finger domain bound to the adeno-associated virus p5 initiator element

PDB DOI: 10.2210/pdb1ubd/pdb

Classification: TRANSCRIPTION/DNA
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 1996-10-04
Deposition Author(s): Burley, S.K. , Houbaviy, H.B. , Shenk, T. , Usheva, A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.5 Å

1ubd
Literature

Co-crystal structure of human yy1 zinc finger domain bound to the adeno-associated virus p5 initiator element

Burley, S.K. , Houbaviy, H.B. , Shenk, T. , Usheva, A.

Primary Citation of Related Structures: 1UBD


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*AP*GP*GP*GP*TP*CP*TP*CP*CP*AP*TP*TP*TP*TP*GP*AP*A P*GP*CP*G)-3') a 20 NA AGGGTCTCCATTTTGAAGCG
DNA (5'-D(*CP*GP*CP*TP*TP*CP*AP*AP*AP*AP*TP*GP*GP*AP*GP*AP*C P*CP*CP*T)-3') b 20 NA CGCTTCAAAATGGAGACCCT

Proteins
Molecule Chains Sequence Length Organism Sequence
PROTEIN (YY1 ZINC FINGER DOMAIN) C 124 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MEPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 1996-10-04
Deposition Author(s): Burley, S.K. , Houbaviy, H.B. , Shenk, T. , Usheva, A.