PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

1TRJ

Homology model of yeast rack1 protein fitted into 11.7a cryo-em map of yeast 80s ribosome

PDB DOI: 10.2210/pdb1trj/pdb

Classification: SIGNALING PROTEIN
Organism(s): Saccharomyces Cerevisiae , Synthetic Construct

Deposited: 2004-06-21
Deposition Author(s): Frank, J. , Gursky, R. , Nilsson, J. , Nissen, P. , Sengupta, J. , Spahn, C.M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 11.7 Å

1trj
Literature

Homology model of yeast rack1 protein fitted into 11.7a cryo-em map of yeast 80s ribosome

Frank, J. , Gursky, R. , Nilsson, J. , Nissen, P. , Sengupta, J. , Spahn, C.M.

Primary Citation of Related Structures: 1TRJ


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
Helix 39 of 18S rRNA b 41 NA CCGCCGUUAGUUGCCAGCGGUUCGGCCGGGCACUCUAACGG
Helix 40 of 18S rRNA c 27 NA GACUGCCCGCGAAAGCGGGAGGAAGGA

Proteins
Molecule Chains Sequence Length Organism Sequence
Guanine nucleotide-binding protein beta subunit-like protein A 314 Saccharomyces Cerevisiae , Synthetic Construct MASNEVLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2004-06-21
Deposition Author(s): Frank, J. , Gursky, R. , Nilsson, J. , Nissen, P. , Sengupta, J. , Spahn, C.M.