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1TRJ

Homology model of yeast rack1 protein fitted into 11.7a cryo-em map of yeast 80s ribosome

PDB DOI: 10.2210/pdb1trj/pdb

Classification: SIGNALING PROTEIN
Organism(s): Grouper Iridovirus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2004-06-21
Deposition Author(s): Frank, J. , Gursky, R. , Nilsson, J. , Nissen, P. , Sengupta, J. , Spahn, C.M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 11.7 Å

1trj
Literature

Homology model of yeast rack1 protein fitted into 11.7a cryo-em map of yeast 80s ribosome

Frank, J. , Gursky, R. , Nilsson, J. , Nissen, P. , Sengupta, J. , Spahn, C.M.

Primary Citation of Related Structures: 1TRJ


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
Helix 39 of 18S rRNA b 41 NA CCGCCGUUAGUUGCCAGCGGUUCGGCCGGGCACUCUAACGG
Helix 40 of 18S rRNA c 27 NA GACUGCCCGCGAAAGCGGGAGGAAGGA

Proteins
Molecule Chains Sequence Length Organism Sequence
Guanine nucleotide-binding protein beta subunit-like protein A 314 Grouper Iridovirus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MASNEVLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2004-06-21
Deposition Author(s): Frank, J. , Gursky, R. , Nilsson, J. , Nissen, P. , Sengupta, J. , Spahn, C.M.