1N6Q
Hiv-1 reverse transcriptase crosslinked to pre-translocation aztmp-terminated dna (complex n)
PDB DOI: 10.2210/pdb1n6q/pdb
Classification: TRANSFERASE/IMMUNE SYSTEM/DNA Organism(s): Human Immunodeficiency Virus 1 , Mus Musculus , Synthetic Construct
Deposited: 2002-11-11 Deposition Author(s): Arnold, E. , Birktoft, J.J. , Boyer, P.L. , Clark Jr., A.D. , Das, K. , Hughes, S.H. , Ilankumaran, I. , Jerina, D.M. , Ramesha, A.R. , Sarafianos, S.G. , Sayer, J.M. , Tuske, S.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3 Å
Hiv-1 reverse transcriptase crosslinked to pre-translocation aztmp-terminated dna (complex n)
Arnold, E. , Birktoft, J.J. , Boyer, P.L. , Clark Jr., A.D. , Das, K. , Hughes, S.H. , Ilankumaran, I. , Jerina, D.M. , Ramesha, A.R. , Sarafianos, S.G. , Sayer, J.M. , Tuske, S.
Primary Citation of Related Structures: 1N6Q
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*AP*T*GP*CP*AP*TP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*TP*GP*TP*G)-3' | t | 27 | NA | ATGCATGGCGCCCGAACAGGGACTGTG |
| 5'-D(*A*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*(MRG)P*CP*GP*CP*CP*AP*(ATM))-3' | p | 22 | NA | ACAGTCCCTGTTCGGGCGCCAT |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Reverse Transcriptase | A | 558 | Human Immunodeficiency Virus 1 , Mus Musculus , Synthetic Construct | PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDICKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRK |
| Reverse Transcriptase | B | 430 | Human Immunodeficiency Virus 1 , Mus Musculus , Synthetic Construct | PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLE |
| Monoclonal Antibody (Light Chain) | L | 211 | Human Immunodeficiency Virus 1 , Mus Musculus , Synthetic Construct | DIQMTQTTSSLSASLGDRVTISCSASQDISSYLNWYQQKPEGTVKLLIYYTSSLHSGVPSRFSGSGSGTDYSLTISNLEPEDIATYYCQQYSKFPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR |
| Monoclonal Antibody (Heavy Chain) | H | 225 | Human Immunodeficiency Virus 1 , Mus Musculus , Synthetic Construct | QITLKESGPGIVQPSQPFRLTCTFSGFSLSTSGIGVTWIRQPSGKGLEWLATIWWDDDNRYNPSLKSRLTVSKDTSNNQAFLNMMTVETADTAIYYCAQSAITSVTDSAMDHWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPADC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2002-11-11 Deposition Author(s): Arnold, E. , Birktoft, J.J. , Boyer, P.L. , Clark Jr., A.D. , Das, K. , Hughes, S.H. , Ilankumaran, I. , Jerina, D.M. , Ramesha, A.R. , Sarafianos, S.G. , Sayer, J.M. , Tuske, S.