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1N48

Y-family dna polymerase dpo4 in complex with dna containing abasic lesion

PDB DOI: 10.2210/pdb1n48/pdb

Classification: TRANSFERASE/DNA
Organism(s): Paramecium Tetraurelia Strain D4-2 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2002-10-30
Deposition Author(s): Boudsocq, F. , Ling, H. , Woodgate, R. , Yang, W.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.2 Å

1n48
Literature

Y-family dna polymerase dpo4 in complex with dna containing abasic lesion

Boudsocq, F. , Ling, H. , Woodgate, R. , Yang, W.

Primary Citation of Related Structures: 1N48


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*A)-3' b 13 NA GGGGGAAGGACTA
5'-D(*CP*AP*(3DR)P*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3' c 16 NA CANTAGTCCTTCCCCC

Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase IV A 352 Paramecium Tetraurelia Strain D4-2 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2002-10-30
Deposition Author(s): Boudsocq, F. , Ling, H. , Woodgate, R. , Yang, W.