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1ID3

Crystal structure of the yeast nucleosome core particle reveals fundamental differences in inter-nucleosome interactions

PDB DOI: 10.2210/pdb1id3/pdb

Classification: STRUCTURAL PROTEIN/DNA
Organism(s): Salmonella Enterica , Grouper Iridovirus

Deposited: 2001-04-03
Deposition Author(s): Luger, K. , Suto, R.K. , White, C.L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.1 Å

1id3
Literature

Crystal structure of the yeast nucleosome core particle reveals fundamental differences in inter-nucleosome interactions

Luger, K. , Suto, R.K. , White, C.L.

Primary Citation of Related Structures: 1ID3


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
PALINDROMIC 146BP DNA FRAGMENT i 146 NA ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT
PALINDROMIC 146BP DNA FRAGMENT j 146 NA ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT

Proteins
Molecule Chains Sequence Length Organism Sequence
HISTONE H3 A 135 Salmonella Enterica , Grouper Iridovirus ARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKEIKLARRLRGERS
HISTONE H3 E 135 Salmonella Enterica , Grouper Iridovirus ARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKEIKLARRLRGERS
HISTONE H4 B 102 Salmonella Enterica , Grouper Iridovirus SGRGKGGKGLGKGGAKRHRKILRDNIQGITKPAIRRLARRGGVKRISGLIYEEVRAVLKSFLESVIRDSVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFGG
HISTONE H4 F 102 Salmonella Enterica , Grouper Iridovirus SGRGKGGKGLGKGGAKRHRKILRDNIQGITKPAIRRLARRGGVKRISGLIYEEVRAVLKSFLESVIRDSVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFGG
HISTONE H2A.1 C 131 Salmonella Enterica , Grouper Iridovirus SGGKGGKAGSAAKASQSRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAKATKASQEL
HISTONE H2A.1 G 131 Salmonella Enterica , Grouper Iridovirus SGGKGGKAGSAAKASQSRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAKATKASQEL
HISTONE H2B.2 D 130 Salmonella Enterica , Grouper Iridovirus SSAAEKKPASKAPAEKKPAAKKTSTSVDGKKRSKVRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA
HISTONE H2B.2 H 130 Salmonella Enterica , Grouper Iridovirus SSAAEKKPASKAPAEKKPAAKKTSTSVDGKKRSKVRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2001-04-03
Deposition Author(s): Luger, K. , Suto, R.K. , White, C.L.