Tetrameric restriction endonuclease ngomiv in complex with cleaved dna
PDB DOI: 10.2210/pdb1fiu/pdb
Classification: hydrolase/DNA Organism(s): Neisseria Gonorrhoeae , Synthetic Construct
Deposited: 2000-08-07 Deposition Author(s): Deibert, M. , Grazulis, S. , Huber, R. , Sasnauskas, G. , Siksnys, V.
Tetrameric restriction endonuclease ngomiv in complex with cleaved dna
Deibert, M. , Grazulis, S. , Huber, R. , Sasnauskas, G. , Siksnys, V.
Primary Citation of Related Structures: 1FIU
Nucleic Acids / Hybrid | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
DNA (5'-D(*TP*GP*CP*G)-3') | e | 4 | NA | TGCG |
DNA (5'-D(*TP*GP*CP*G)-3') | f | 4 | NA | TGCG |
DNA (5'-D(*TP*GP*CP*G)-3') | g | 4 | NA | TGCG |
DNA (5'-D(*TP*GP*CP*G)-3') | h | 4 | NA | TGCG |
DNA (5'-D(P*CP*CP*GP*GP*CP*GP*C)-3') | i | 7 | NA | CCGGCGC |
DNA (5'-D(P*CP*CP*GP*GP*CP*GP*C)-3') | j | 7 | NA | CCGGCGC |
DNA (5'-D(P*CP*CP*GP*GP*CP*GP*C)-3') | k | 7 | NA | CCGGCGC |
DNA (5'-D(P*CP*CP*GP*GP*CP*GP*C)-3') | l | 7 | NA | CCGGCGC |
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
TYPE II RESTRICTION ENZYME NGOMI | A | 286 | Neisseria Gonorrhoeae , Synthetic Construct | MQPLFTQERRIFHKKLLDGNILATNNRGVVSNADGSNTRSFNIAKGIADLLHSETVSERLPGQTSGNAFEAICSEFVQSAFEKLQHIRPGDWNVKQVGSRNRLEIARYQQYAHLTALAKAAEENPELAAALGSDYTITPDIIVTRNLIADAEINRNEFLVDENIATYASLRAGNGNMPLLHASISCKWTIRSDRAQNARSEGLNLVRNRKGRLPHIVVVTAEPTPSRISSIALGTGEIDCVYHFALYELEQILQSLNYEDALDLFYIMVNGKRLKDISDLPLDLAV |
TYPE II RESTRICTION ENZYME NGOMI | B | 286 | Neisseria Gonorrhoeae , Synthetic Construct | MQPLFTQERRIFHKKLLDGNILATNNRGVVSNADGSNTRSFNIAKGIADLLHSETVSERLPGQTSGNAFEAICSEFVQSAFEKLQHIRPGDWNVKQVGSRNRLEIARYQQYAHLTALAKAAEENPELAAALGSDYTITPDIIVTRNLIADAEINRNEFLVDENIATYASLRAGNGNMPLLHASISCKWTIRSDRAQNARSEGLNLVRNRKGRLPHIVVVTAEPTPSRISSIALGTGEIDCVYHFALYELEQILQSLNYEDALDLFYIMVNGKRLKDISDLPLDLAV |
TYPE II RESTRICTION ENZYME NGOMI | C | 286 | Neisseria Gonorrhoeae , Synthetic Construct | MQPLFTQERRIFHKKLLDGNILATNNRGVVSNADGSNTRSFNIAKGIADLLHSETVSERLPGQTSGNAFEAICSEFVQSAFEKLQHIRPGDWNVKQVGSRNRLEIARYQQYAHLTALAKAAEENPELAAALGSDYTITPDIIVTRNLIADAEINRNEFLVDENIATYASLRAGNGNMPLLHASISCKWTIRSDRAQNARSEGLNLVRNRKGRLPHIVVVTAEPTPSRISSIALGTGEIDCVYHFALYELEQILQSLNYEDALDLFYIMVNGKRLKDISDLPLDLAV |
TYPE II RESTRICTION ENZYME NGOMI | D | 286 | Neisseria Gonorrhoeae , Synthetic Construct | MQPLFTQERRIFHKKLLDGNILATNNRGVVSNADGSNTRSFNIAKGIADLLHSETVSERLPGQTSGNAFEAICSEFVQSAFEKLQHIRPGDWNVKQVGSRNRLEIARYQQYAHLTALAKAAEENPELAAALGSDYTITPDIIVTRNLIADAEINRNEFLVDENIATYASLRAGNGNMPLLHASISCKWTIRSDRAQNARSEGLNLVRNRKGRLPHIVVVTAEPTPSRISSIALGTGEIDCVYHFALYELEQILQSLNYEDALDLFYIMVNGKRLKDISDLPLDLAV |
Method: X-RAY DIFFRACTION
Deposited Date: 2000-08-07 Deposition Author(s): Deibert, M. , Grazulis, S. , Huber, R. , Sasnauskas, G. , Siksnys, V.