Crystal structure of the thermus thermophilus 70s ribosome in complex with dirithromycin and bound to mrna and a-, p-, and e-site trnas at 2.80a resolution Deposition Author(s): Bogdanov, A.A. , Dontsova, O.A. , Kartsev, V.G. , Khabibullina, N.F. , Komarova, E.S. , Konevega, A.L. , Osterman, I.A. , Paleskava, A. , Polikanov, Y.S. , Sergiev, P.V. , Shiriaev, D.I. , Syroegin, E.A. , Tereshchenkov, A.G.
Date: 2019-03-28 Method: X-RAY DIFFRACTION Resolution: 2.8 Å Organism(s): Escherichia Coli , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 6OF1_1A , 6OF1_2A , 6OF1_1O , 6OF1_2O , 6OF1_1P , 6OF1_2P , 6OF1_1Q , 6OF1_2Q , 6OF1_1R , 6OF1_2R , 6OF1_1S , 6OF1_2S , 6OF1_1T , 6OF1_2T , 6OF1_1U , 6OF1_2U , 6OF1_1V , 6OF1_2V , 6OF1_1W , 6OF1_2W , 6OF1_1X , 6OF1_2X , 6OF1_1B , 6OF1_2B , 6OF1_1Y , 6OF1_2Y , 6OF1_1Z , 6OF1_2Z , 6OF1_10 , 6OF1_20 , 6OF1_11 , 6OF1_21 , 6OF1_12 , 6OF1_22 , 6OF1_13 , 6OF1_23 , 6OF1_14 , 6OF1_24 , 6OF1_15 , 6OF1_25 , 6OF1_16 , 6OF1_26 , 6OF1_17 , 6OF1_27 , 6OF1_1D , 6OF1_2D , 6OF1_18 , 6OF1_28 , 6OF1_19 , 6OF1_29 , 6OF1_1C , 6OF1_2C , 6OF1_1E , 6OF1_2E , 6OF1_1F , 6OF1_2F , 6OF1_1G , 6OF1_2G , 6OF1_1H , 6OF1_2H , 6OF1_1I , 6OF1_2I , 6OF1_1J , 6OF1_2J , 6OF1_1K , 6OF1_2K , 6OF1_1L , 6OF1_2L , 6OF1_1M , 6OF1_2M , 6OF1_1N , 6OF1_2N
Crystal structure of the a2058-dimethylated thermus thermophilus 70s ribosome in complex with mrna, aminoacylated a- and p-site trnas, and deacylated e-site trna at 2.40a resolution Deposition Author(s): Aleksandrova, E.V. , Atkinson, G.C. , Gregory, S.T. , Mankin, A.S. , Polikanov, Y.S. , Svetlov, M.S. , Syroegin, E.A.
Date: 2020-06-19 Method: X-RAY DIFFRACTION Resolution: 2.4 Å Organism(s): Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 6XHV_1A , 6XHV_2A , 6XHV_1O , 6XHV_2O , 6XHV_1P , 6XHV_2P , 6XHV_1Q , 6XHV_2Q , 6XHV_1R , 6XHV_2R , 6XHV_1S , 6XHV_2S , 6XHV_1T , 6XHV_2T , 6XHV_1U , 6XHV_2U , 6XHV_1V , 6XHV_2V , 6XHV_1W , 6XHV_2W , 6XHV_1X , 6XHV_2X , 6XHV_1B , 6XHV_2B , 6XHV_1Y , 6XHV_2Y , 6XHV_1Z , 6XHV_2Z , 6XHV_10 , 6XHV_20 , 6XHV_11 , 6XHV_21 , 6XHV_12 , 6XHV_22 , 6XHV_13 , 6XHV_23 , 6XHV_14 , 6XHV_24 , 6XHV_15 , 6XHV_25 , 6XHV_16 , 6XHV_26 , 6XHV_17 , 6XHV_27 , 6XHV_1D , 6XHV_2D , 6XHV_18 , 6XHV_28 , 6XHV_19 , 6XHV_29 , 6XHV_1C , 6XHV_2C , 6XHV_1E , 6XHV_2E , 6XHV_1F , 6XHV_2F , 6XHV_1G , 6XHV_2G , 6XHV_1H , 6XHV_2H , 6XHV_1I , 6XHV_2I , 6XHV_1J , 6XHV_2J , 6XHV_1K , 6XHV_2K , 6XHV_1L , 6XHV_2L , 6XHV_1M , 6XHV_2M , 6XHV_1N , 6XHV_2N
Crystal structure of the a2058-unmethylated thermus thermophilus 70s ribosome in complex with mrna, aminoacylated a- and p-site trnas, and deacylated e-site trna at 2.50a resolution Deposition Author(s): Aleksandrova, E.V. , Atkinson, G.C. , Gregory, S.T. , Mankin, A.S. , Polikanov, Y.S. , Svetlov, M.S. , Syroegin, E.A.
Date: 2020-06-19 Method: X-RAY DIFFRACTION Resolution: 2.5 Å Organism(s): Escherichia Coli , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 6XHW_1A , 6XHW_2A , 6XHW_1O , 6XHW_2O , 6XHW_1P , 6XHW_2P , 6XHW_1Q , 6XHW_2Q , 6XHW_1R , 6XHW_2R , 6XHW_1S , 6XHW_2S , 6XHW_1T , 6XHW_2T , 6XHW_1U , 6XHW_2U , 6XHW_1V , 6XHW_2V , 6XHW_1W , 6XHW_2W , 6XHW_1X , 6XHW_2X , 6XHW_1B , 6XHW_2B , 6XHW_1Y , 6XHW_2Y , 6XHW_1Z , 6XHW_2Z , 6XHW_10 , 6XHW_20 , 6XHW_11 , 6XHW_21 , 6XHW_12 , 6XHW_22 , 6XHW_13 , 6XHW_23 , 6XHW_14 , 6XHW_24 , 6XHW_15 , 6XHW_25 , 6XHW_16 , 6XHW_26 , 6XHW_17 , 6XHW_27 , 6XHW_1D , 6XHW_2D , 6XHW_18 , 6XHW_28 , 6XHW_19 , 6XHW_29 , 6XHW_1C , 6XHW_2C , 6XHW_1E , 6XHW_2E , 6XHW_1F , 6XHW_2F , 6XHW_1G , 6XHW_2G , 6XHW_1H , 6XHW_2H , 6XHW_1I , 6XHW_2I , 6XHW_1J , 6XHW_2J , 6XHW_1K , 6XHW_2K , 6XHW_1L , 6XHW_2L , 6XHW_1M , 6XHW_2M , 6XHW_1N , 6XHW_2N
Crystal structure of the a2058-unmethylated thermus thermophilus 70s ribosome in complex with erythromycin and protein y (yfia) at 2.55a resolution Deposition Author(s): Aleksandrova, E.V. , Atkinson, G.C. , Gregory, S.T. , Mankin, A.S. , Polikanov, Y.S. , Svetlov, M.S. , Syroegin, E.A.
Date: 2020-06-19 Method: X-RAY DIFFRACTION Resolution: 2.55 Å Organism(s): Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 Sequences Data: 6XHX_1A , 6XHX_2A , 6XHX_1O , 6XHX_2O , 6XHX_1P , 6XHX_2P , 6XHX_1Q , 6XHX_2Q , 6XHX_1R , 6XHX_2R , 6XHX_1S , 6XHX_2S , 6XHX_1T , 6XHX_2T , 6XHX_1U , 6XHX_2U , 6XHX_1V , 6XHX_2V , 6XHX_1W , 6XHX_2W , 6XHX_1X , 6XHX_2X , 6XHX_1B , 6XHX_2B , 6XHX_1Y , 6XHX_2Y , 6XHX_1Z , 6XHX_2Z , 6XHX_10 , 6XHX_20 , 6XHX_11 , 6XHX_21 , 6XHX_12 , 6XHX_22 , 6XHX_13 , 6XHX_23 , 6XHX_14 , 6XHX_24 , 6XHX_15 , 6XHX_25 , 6XHX_16 , 6XHX_26 , 6XHX_17 , 6XHX_27 , 6XHX_1D , 6XHX_2D , 6XHX_18 , 6XHX_28 , 6XHX_19 , 6XHX_29 , 6XHX_1C , 6XHX_2C , 6XHX_1E , 6XHX_2E , 6XHX_1F , 6XHX_2F , 6XHX_1G , 6XHX_2G , 6XHX_1H , 6XHX_2H , 6XHX_1I , 6XHX_2I , 6XHX_1J , 6XHX_2J , 6XHX_1K , 6XHX_2K , 6XHX_1L , 6XHX_2L , 6XHX_1M , 6XHX_2M , 6XHX_1N , 6XHX_2N
Crystal structure of the thermus thermophilus 70s ribosome in complex with telithromycin, mrna, aminoacylated a- and p-site trnas, and deacylated e-site trna at 2.60a resolution Deposition Author(s): Aleksandrova, E.V. , Atkinson, G.C. , Gregory, S.T. , Mankin, A.S. , Polikanov, Y.S. , Svetlov, M.S. , Syroegin, E.A.
Date: 2020-06-19 Method: X-RAY DIFFRACTION Resolution: 2.6 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 6XHY_1A , 6XHY_2A , 6XHY_1O , 6XHY_2O , 6XHY_1P , 6XHY_2P , 6XHY_1Q , 6XHY_2Q , 6XHY_1R , 6XHY_2R , 6XHY_1S , 6XHY_2S , 6XHY_1T , 6XHY_2T , 6XHY_1U , 6XHY_2U , 6XHY_1V , 6XHY_2V , 6XHY_1W , 6XHY_2W , 6XHY_1X , 6XHY_2X , 6XHY_1B , 6XHY_2B , 6XHY_1Y , 6XHY_2Y , 6XHY_1Z , 6XHY_2Z , 6XHY_10 , 6XHY_20 , 6XHY_11 , 6XHY_21 , 6XHY_12 , 6XHY_22 , 6XHY_13 , 6XHY_23 , 6XHY_14 , 6XHY_24 , 6XHY_15 , 6XHY_25 , 6XHY_16 , 6XHY_26 , 6XHY_17 , 6XHY_27 , 6XHY_1D , 6XHY_2D , 6XHY_18 , 6XHY_28 , 6XHY_19 , 6XHY_29 , 6XHY_1C , 6XHY_2C , 6XHY_1E , 6XHY_2E , 6XHY_1F , 6XHY_2F , 6XHY_1G , 6XHY_2G , 6XHY_1H , 6XHY_2H , 6XHY_1I , 6XHY_2I , 6XHY_1J , 6XHY_2J , 6XHY_1K , 6XHY_2K , 6XHY_1L , 6XHY_2L , 6XHY_1M , 6XHY_2M , 6XHY_1N , 6XHY_2N
Crystal structure of the thermus thermophilus 70s ribosome in complex with bac7-001, mrna, and deacylated p-site trna at 3.00a resolution Deposition Author(s): Armas, F. , Beckert, B. , Borisek, J. , Buchmann, J. , Collis, D.W.P. , Di Stasi, A. , Hilpert, K. , Magistrato, A. , Mardirossian, M. , Polikanov, Y.S. , Scocchi, M. , Sola, R. , Syroegin, E.A. , Valencic, E. , Wilson, D.N.
Date: 2020-08-11 Method: X-RAY DIFFRACTION Resolution: 3 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 7JQL_1A , 7JQL_2A , 7JQL_1O , 7JQL_2O , 7JQL_1P , 7JQL_2P , 7JQL_1Q , 7JQL_2Q , 7JQL_1R , 7JQL_2R , 7JQL_1S , 7JQL_2S , 7JQL_1T , 7JQL_2T , 7JQL_1U , 7JQL_2U , 7JQL_1V , 7JQL_2V , 7JQL_1W , 7JQL_2W , 7JQL_1X , 7JQL_2X , 7JQL_1B , 7JQL_2B , 7JQL_1Y , 7JQL_2Y , 7JQL_1Z , 7JQL_2Z , 7JQL_10 , 7JQL_20 , 7JQL_11 , 7JQL_21 , 7JQL_12 , 7JQL_22 , 7JQL_13 , 7JQL_23 , 7JQL_14 , 7JQL_24 , 7JQL_15 , 7JQL_25 , 7JQL_16 , 7JQL_26 , 7JQL_17 , 7JQL_27 , 7JQL_1D , 7JQL_2D , 7JQL_18 , 7JQL_28 , 7JQL_19 , 7JQL_29 , 7JQL_1C , 7JQL_2C , 7JQL_1E , 7JQL_2E , 7JQL_1F , 7JQL_2F , 7JQL_1G , 7JQL_2G , 7JQL_1H , 7JQL_2H , 7JQL_1I , 7JQL_2I , 7JQL_1J , 7JQL_2J , 7JQL_1K , 7JQL_2K , 7JQL_1L , 7JQL_2L , 7JQL_1M , 7JQL_2M , 7JQL_1N , 7JQL_2N
Crystal structure of the thermus thermophilus 70s ribosome in complex with bac7-002, mrna, and deacylated p-site trna at 3.05a resolution Deposition Author(s): Armas, F. , Beckert, B. , Borisek, J. , Buchmann, J. , Collis, D.W.P. , Di Stasi, A. , Hilpert, K. , Magistrato, A. , Mardirossian, M. , Polikanov, Y.S. , Scocchi, M. , Sola, R. , Syroegin, E.A. , Valencic, E. , Wilson, D.N.
Date: 2020-08-11 Method: X-RAY DIFFRACTION Resolution: 3.05 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 7JQM_1A , 7JQM_2A , 7JQM_1O , 7JQM_2O , 7JQM_1P , 7JQM_2P , 7JQM_1Q , 7JQM_2Q , 7JQM_1R , 7JQM_2R , 7JQM_1S , 7JQM_2S , 7JQM_1T , 7JQM_2T , 7JQM_1U , 7JQM_2U , 7JQM_1V , 7JQM_2V , 7JQM_1W , 7JQM_2W , 7JQM_1X , 7JQM_2X , 7JQM_1B , 7JQM_2B , 7JQM_1Y , 7JQM_2Y , 7JQM_1Z , 7JQM_2Z , 7JQM_10 , 7JQM_20 , 7JQM_11 , 7JQM_21 , 7JQM_12 , 7JQM_22 , 7JQM_13 , 7JQM_23 , 7JQM_14 , 7JQM_24 , 7JQM_15 , 7JQM_25 , 7JQM_16 , 7JQM_26 , 7JQM_17 , 7JQM_27 , 7JQM_1D , 7JQM_2D , 7JQM_18 , 7JQM_28 , 7JQM_19 , 7JQM_29 , 7JQM_1C , 7JQM_2C , 7JQM_1E , 7JQM_2E , 7JQM_1F , 7JQM_2F , 7JQM_1G , 7JQM_2G , 7JQM_1H , 7JQM_2H , 7JQM_1I , 7JQM_2I , 7JQM_1J , 7JQM_2J , 7JQM_1K , 7JQM_2K , 7JQM_1L , 7JQM_2L , 7JQM_1M , 7JQM_2M , 7JQM_1N , 7JQM_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with iboxamycin, mrna, deacylated a- and e-site trnas, and aminoacylated p-site trna at 2.50a resolution Deposition Author(s): Chatman, K. , Klepacki, D. , Ladley, R.P. , Mankin, A.S. , Mason, J.D. , Mitcheltree, M.J. , Myers, A.G. , Pisipati, A. , Polikanov, Y.S. , Pote, A.R. , Silvestre, K.J. , Syroegin, E.A. , Terwilliger, D.W. , Testolin, G. , Wu, K.J.Y.
Date: 2021-08-06 Method: X-RAY DIFFRACTION Resolution: 2.5 Å Organism(s): Escherichia Coli , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 7RQ8_1A , 7RQ8_2A , 7RQ8_1O , 7RQ8_2O , 7RQ8_1P , 7RQ8_2P , 7RQ8_1Q , 7RQ8_2Q , 7RQ8_1R , 7RQ8_2R , 7RQ8_1S , 7RQ8_2S , 7RQ8_1T , 7RQ8_2T , 7RQ8_1U , 7RQ8_2U , 7RQ8_1V , 7RQ8_2V , 7RQ8_1W , 7RQ8_2W , 7RQ8_1X , 7RQ8_2X , 7RQ8_1B , 7RQ8_2B , 7RQ8_1Y , 7RQ8_2Y , 7RQ8_1Z , 7RQ8_2Z , 7RQ8_10 , 7RQ8_20 , 7RQ8_11 , 7RQ8_21 , 7RQ8_12 , 7RQ8_22 , 7RQ8_13 , 7RQ8_23 , 7RQ8_14 , 7RQ8_24 , 7RQ8_15 , 7RQ8_25 , 7RQ8_16 , 7RQ8_26 , 7RQ8_17 , 7RQ8_27 , 7RQ8_1D , 7RQ8_2D , 7RQ8_18 , 7RQ8_28 , 7RQ8_19 , 7RQ8_29 , 7RQ8_1C , 7RQ8_2C , 7RQ8_1E , 7RQ8_2E , 7RQ8_1F , 7RQ8_2F , 7RQ8_1G , 7RQ8_2G , 7RQ8_1H , 7RQ8_2H , 7RQ8_1I , 7RQ8_2I , 7RQ8_1J , 7RQ8_2J , 7RQ8_1K , 7RQ8_2K , 7RQ8_1L , 7RQ8_2L , 7RQ8_1M , 7RQ8_2M , 7RQ8_1N , 7RQ8_2N
Crystal structure of the a2058-dimethylated thermus thermophilus 70s ribosome in complex with iboxamycin, mrna, deacylated a- and e-site trnas, and aminoacylated p-site trna at 2.60a resolution Deposition Author(s): Chatman, K. , Klepacki, D. , Ladley, R.P. , Mankin, A.S. , Mason, J.D. , Mitcheltree, M.J. , Myers, A.G. , Pisipati, A. , Polikanov, Y.S. , Pote, A.R. , Silvestre, K.J. , Syroegin, E.A. , Terwilliger, D.W. , Testolin, G. , Wu, K.J.Y.
Date: 2021-08-06 Method: X-RAY DIFFRACTION Resolution: 2.6 Å Organism(s): Escherichia Coli , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 7RQ9_1A , 7RQ9_2A , 7RQ9_1O , 7RQ9_2O , 7RQ9_1P , 7RQ9_2P , 7RQ9_1Q , 7RQ9_2Q , 7RQ9_1R , 7RQ9_2R , 7RQ9_1S , 7RQ9_2S , 7RQ9_1T , 7RQ9_2T , 7RQ9_1U , 7RQ9_2U , 7RQ9_1V , 7RQ9_2V , 7RQ9_1W , 7RQ9_2W , 7RQ9_1X , 7RQ9_2X , 7RQ9_1B , 7RQ9_2B , 7RQ9_1Y , 7RQ9_2Y , 7RQ9_1Z , 7RQ9_2Z , 7RQ9_10 , 7RQ9_20 , 7RQ9_11 , 7RQ9_21 , 7RQ9_12 , 7RQ9_22 , 7RQ9_13 , 7RQ9_23 , 7RQ9_14 , 7RQ9_24 , 7RQ9_15 , 7RQ9_25 , 7RQ9_16 , 7RQ9_26 , 7RQ9_17 , 7RQ9_27 , 7RQ9_1D , 7RQ9_2D , 7RQ9_18 , 7RQ9_28 , 7RQ9_19 , 7RQ9_29 , 7RQ9_1C , 7RQ9_2C , 7RQ9_1E , 7RQ9_2E , 7RQ9_1F , 7RQ9_2F , 7RQ9_1G , 7RQ9_2G , 7RQ9_1H , 7RQ9_2H , 7RQ9_1I , 7RQ9_2I , 7RQ9_1J , 7RQ9_2J , 7RQ9_1K , 7RQ9_2K , 7RQ9_1L , 7RQ9_2L , 7RQ9_1M , 7RQ9_2M , 7RQ9_1N , 7RQ9_2N
Crystal structure of the thermus thermophilus 70s ribosome in complex with protein y, a-site aminoacyl-trna analog acc-pmn, and p-site mti-tripeptidyl-trna analog acca-itm at 2.40a resolution Deposition Author(s): Flemmich, L. , Klepacki, D. , Micura, R. , Polikanov, Y.S. , Syroegin, E.A. , Vazquez-Laslop, N.
Date: 2021-08-06 Method: X-RAY DIFFRACTION Resolution: 2.4 Å Organism(s): Escherichia Coli K-12 , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 7RQA_1A , 7RQA_2A , 7RQA_1O , 7RQA_2O , 7RQA_1P , 7RQA_2P , 7RQA_1Q , 7RQA_2Q , 7RQA_1R , 7RQA_2R , 7RQA_1S , 7RQA_2S , 7RQA_1T , 7RQA_2T , 7RQA_1U , 7RQA_2U , 7RQA_1V , 7RQA_2V , 7RQA_1W , 7RQA_2W , 7RQA_1X , 7RQA_2X , 7RQA_1B , 7RQA_2B , 7RQA_1Y , 7RQA_2Y , 7RQA_1Z , 7RQA_2Z , 7RQA_10 , 7RQA_20 , 7RQA_11 , 7RQA_21 , 7RQA_12 , 7RQA_22 , 7RQA_13 , 7RQA_23 , 7RQA_14 , 7RQA_24 , 7RQA_15 , 7RQA_25 , 7RQA_16 , 7RQA_26 , 7RQA_17 , 7RQA_27 , 7RQA_1D , 7RQA_2D , 7RQA_18 , 7RQA_28 , 7RQA_19 , 7RQA_29 , 7RQA_1C , 7RQA_2C , 7RQA_1E , 7RQA_2E , 7RQA_1F , 7RQA_2F , 7RQA_1G , 7RQA_2G , 7RQA_1H , 7RQA_2H , 7RQA_1I , 7RQA_2I , 7RQA_1J , 7RQA_2J , 7RQA_1K , 7RQA_2K , 7RQA_1L , 7RQA_2L , 7RQA_1M , 7RQA_2M , 7RQA_1N , 7RQA_2N