Crystal structure of the thermus thermophilus 70s ribosome in complex with mrna (containing pseudouridine at the first position of the codon) and deacylated a-, p-, and e-site trnas at 2.95a resolution Deposition Author(s): Batool, Z. , Dobosz-Bartoszek, M. , Polikanov, Y.S.
Date: 2019-10-14 Method: X-RAY DIFFRACTION Resolution: 2.95 Å Organism(s): Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 6UO1_1A , 6UO1_2A , 6UO1_1O , 6UO1_2O , 6UO1_1P , 6UO1_2P , 6UO1_1Q , 6UO1_2Q , 6UO1_1R , 6UO1_2R , 6UO1_1S , 6UO1_2S , 6UO1_1T , 6UO1_2T , 6UO1_1U , 6UO1_2U , 6UO1_1V , 6UO1_2V , 6UO1_1W , 6UO1_2W , 6UO1_1X , 6UO1_2X , 6UO1_1B , 6UO1_2B , 6UO1_1Y , 6UO1_2Y , 6UO1_1Z , 6UO1_2Z , 6UO1_10 , 6UO1_20 , 6UO1_11 , 6UO1_21 , 6UO1_12 , 6UO1_22 , 6UO1_13 , 6UO1_23 , 6UO1_14 , 6UO1_24 , 6UO1_15 , 6UO1_25 , 6UO1_16 , 6UO1_26 , 6UO1_17 , 6UO1_27 , 6UO1_1D , 6UO1_2D , 6UO1_18 , 6UO1_28 , 6UO1_19 , 6UO1_29 , 6UO1_1C , 6UO1_2C , 6UO1_1E , 6UO1_2E , 6UO1_1F , 6UO1_2F , 6UO1_1G , 6UO1_2G , 6UO1_1H , 6UO1_2H , 6UO1_1I , 6UO1_2I , 6UO1_1J , 6UO1_2J , 6UO1_1K , 6UO1_2K , 6UO1_1L , 6UO1_2L , 6UO1_1M , 6UO1_2M , 6UO1_1N , 6UO1_2N
Crystal structure of the thermus thermophilus 70s ribosome in complex with sarecycline, uuc-mrna, and deacylated p-site trna at 2.80a resolution Deposition Author(s): Batool, Z. , Bunick, C.G. , Lomakin, I.B. , Polikanov, Y.S.
Date: 2020-07-09 Method: X-RAY DIFFRACTION Resolution: 2.8 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 6XQD_1A , 6XQD_2A , 6XQD_1O , 6XQD_2O , 6XQD_1P , 6XQD_2P , 6XQD_1Q , 6XQD_2Q , 6XQD_1R , 6XQD_2R , 6XQD_1S , 6XQD_2S , 6XQD_1T , 6XQD_2T , 6XQD_1U , 6XQD_2U , 6XQD_1V , 6XQD_2V , 6XQD_1W , 6XQD_2W , 6XQD_1X , 6XQD_2X , 6XQD_1B , 6XQD_2B , 6XQD_1Y , 6XQD_2Y , 6XQD_1Z , 6XQD_2Z , 6XQD_10 , 6XQD_20 , 6XQD_11 , 6XQD_21 , 6XQD_12 , 6XQD_22 , 6XQD_13 , 6XQD_23 , 6XQD_14 , 6XQD_24 , 6XQD_15 , 6XQD_25 , 6XQD_16 , 6XQD_26 , 6XQD_17 , 6XQD_27 , 6XQD_1D , 6XQD_2D , 6XQD_18 , 6XQD_28 , 6XQD_19 , 6XQD_29 , 6XQD_1C , 6XQD_2C , 6XQD_1E , 6XQD_2E , 6XQD_1F , 6XQD_2F , 6XQD_1G , 6XQD_2G , 6XQD_1H , 6XQD_2H , 6XQD_1I , 6XQD_2I , 6XQD_1J , 6XQD_2J , 6XQD_1K , 6XQD_2K , 6XQD_1L , 6XQD_2L , 6XQD_1M , 6XQD_2M , 6XQD_1N , 6XQD_2N
Crystal structure of the thermus thermophilus 70s ribosome in complex with sarecycline, uaa-mrna, and deacylated p-site trna at 3.00a resolution Deposition Author(s): Batool, Z. , Bunick, C.G. , Lomakin, I.B. , Polikanov, Y.S.
Date: 2020-07-09 Method: X-RAY DIFFRACTION Resolution: 3 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 6XQE_1A , 6XQE_2A , 6XQE_1O , 6XQE_2O , 6XQE_1P , 6XQE_2P , 6XQE_1Q , 6XQE_2Q , 6XQE_1R , 6XQE_2R , 6XQE_1S , 6XQE_2S , 6XQE_1T , 6XQE_2T , 6XQE_1U , 6XQE_2U , 6XQE_1V , 6XQE_2V , 6XQE_1W , 6XQE_2W , 6XQE_1X , 6XQE_2X , 6XQE_1B , 6XQE_2B , 6XQE_1Y , 6XQE_2Y , 6XQE_1Z , 6XQE_2Z , 6XQE_10 , 6XQE_20 , 6XQE_11 , 6XQE_21 , 6XQE_12 , 6XQE_22 , 6XQE_13 , 6XQE_23 , 6XQE_14 , 6XQE_24 , 6XQE_15 , 6XQE_25 , 6XQE_16 , 6XQE_26 , 6XQE_17 , 6XQE_27 , 6XQE_1D , 6XQE_2D , 6XQE_18 , 6XQE_28 , 6XQE_19 , 6XQE_29 , 6XQE_1C , 6XQE_2C , 6XQE_1E , 6XQE_2E , 6XQE_1F , 6XQE_2F , 6XQE_1G , 6XQE_2G , 6XQE_1H , 6XQE_2H , 6XQE_1I , 6XQE_2I , 6XQE_1J , 6XQE_2J , 6XQE_1K , 6XQE_2K , 6XQE_1L , 6XQE_2L , 6XQE_1M , 6XQE_2M , 6XQE_1N , 6XQE_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with berberine analog of chloramphenicol cam-ber, mrna, deacylated a- and e-site trnaphe, and deacylated p-site trnamet at 2.80a resolution Deposition Author(s): Batool, Z. , Bogdanov, A.A. , Lukianov, D.A. , Osterman, I.A. , Paranjpe, M.N. , Pavlova, J.A. , Polikanov, Y.S. , Sumbatyan, N.V. , Tereshchenkov, A.G.
Date: 2024-03-11 Method: X-RAY DIFFRACTION Resolution: 2.8 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 9B00_1A , 9B00_2A , 9B00_1O , 9B00_2O , 9B00_1P , 9B00_2P , 9B00_1Q , 9B00_2Q , 9B00_1R , 9B00_2R , 9B00_1S , 9B00_2S , 9B00_1T , 9B00_2T , 9B00_1U , 9B00_2U , 9B00_1V , 9B00_2V , 9B00_1W , 9B00_2W , 9B00_1X , 9B00_2X , 9B00_1B , 9B00_2B , 9B00_1Y , 9B00_2Y , 9B00_1Z , 9B00_2Z , 9B00_10 , 9B00_20 , 9B00_11 , 9B00_21 , 9B00_12 , 9B00_22 , 9B00_13 , 9B00_23 , 9B00_14 , 9B00_24 , 9B00_15 , 9B00_25 , 9B00_16 , 9B00_26 , 9B00_17 , 9B00_27 , 9B00_1D , 9B00_2D , 9B00_18 , 9B00_28 , 9B00_19 , 9B00_29 , 9B00_1C , 9B00_2C , 9B00_1E , 9B00_2E , 9B00_1F , 9B00_2F , 9B00_1G , 9B00_2G , 9B00_1H , 9B00_2H , 9B00_1I , 9B00_2I , 9B00_1J , 9B00_2J , 9B00_1K , 9B00_2K , 9B00_1L , 9B00_2L , 9B00_1M , 9B00_2M , 9B00_1N , 9B00_2N