Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with spectinomycin, mrna, deacylated a- and e-site trnaphe, and deacylated p-site trnamet at 2.60a resolution Deposition Author(s): Killam, B.Y. , Lee, R.E. , Phelps, G.A. , Polikanov, Y.S.
Date: 2023-11-03 Method: X-RAY DIFFRACTION Resolution: 2.6 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 8UVR_1A , 8UVR_2A , 8UVR_1O , 8UVR_2O , 8UVR_1P , 8UVR_2P , 8UVR_1Q , 8UVR_2Q , 8UVR_1R , 8UVR_2R , 8UVR_1S , 8UVR_2S , 8UVR_1T , 8UVR_2T , 8UVR_1U , 8UVR_2U , 8UVR_1V , 8UVR_2V , 8UVR_1W , 8UVR_2W , 8UVR_1X , 8UVR_2X , 8UVR_1B , 8UVR_2B , 8UVR_1Y , 8UVR_2Y , 8UVR_1Z , 8UVR_2Z , 8UVR_10 , 8UVR_20 , 8UVR_11 , 8UVR_21 , 8UVR_12 , 8UVR_22 , 8UVR_13 , 8UVR_23 , 8UVR_14 , 8UVR_24 , 8UVR_15 , 8UVR_25 , 8UVR_16 , 8UVR_26 , 8UVR_17 , 8UVR_27 , 8UVR_1D , 8UVR_2D , 8UVR_18 , 8UVR_28 , 8UVR_19 , 8UVR_29 , 8UVR_1C , 8UVR_2C , 8UVR_1E , 8UVR_2E , 8UVR_1F , 8UVR_2F , 8UVR_1G , 8UVR_2G , 8UVR_1H , 8UVR_2H , 8UVR_1I , 8UVR_2I , 8UVR_1J , 8UVR_2J , 8UVR_1K , 8UVR_2K , 8UVR_1L , 8UVR_2L , 8UVR_1M , 8UVR_2M , 8UVR_1N , 8UVR_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with spectinomycin derivative 2694, mrna, deacylated a- and e-site trnaphe, and deacylated p-site trnamet at 2.75a resolution Deposition Author(s): Killam, B.Y. , Lee, R.E. , Phelps, G.A. , Polikanov, Y.S.
Date: 2023-11-03 Method: X-RAY DIFFRACTION Resolution: 2.75 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 8UVS_1A , 8UVS_2A , 8UVS_1O , 8UVS_2O , 8UVS_1P , 8UVS_2P , 8UVS_1Q , 8UVS_2Q , 8UVS_1R , 8UVS_2R , 8UVS_1S , 8UVS_2S , 8UVS_1T , 8UVS_2T , 8UVS_1U , 8UVS_2U , 8UVS_1V , 8UVS_2V , 8UVS_1W , 8UVS_2W , 8UVS_1X , 8UVS_2X , 8UVS_1B , 8UVS_2B , 8UVS_1Y , 8UVS_2Y , 8UVS_1Z , 8UVS_2Z , 8UVS_10 , 8UVS_20 , 8UVS_11 , 8UVS_21 , 8UVS_12 , 8UVS_22 , 8UVS_13 , 8UVS_23 , 8UVS_14 , 8UVS_24 , 8UVS_15 , 8UVS_25 , 8UVS_16 , 8UVS_26 , 8UVS_17 , 8UVS_27 , 8UVS_1D , 8UVS_2D , 8UVS_18 , 8UVS_28 , 8UVS_19 , 8UVS_29 , 8UVS_1C , 8UVS_2C , 8UVS_1E , 8UVS_2E , 8UVS_1F , 8UVS_2F , 8UVS_1G , 8UVS_2G , 8UVS_1H , 8UVS_2H , 8UVS_1I , 8UVS_2I , 8UVS_1J , 8UVS_2J , 8UVS_1K , 8UVS_2K , 8UVS_1L , 8UVS_2L , 8UVS_1M , 8UVS_2M , 8UVS_1N , 8UVS_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with macrolone mcx-66, mrna, aminoacylated a-site phe-trnaphe, aminoacylated p-site fmet-trnamet, and deacylated e-site trnaphe at 2.40a resolution Deposition Author(s): Aleksandrova, E.V. , Alizadeh, F. , Klepacki, D. , Liang, J.-H. , Ma, C.-X. , Mankin, A.S. , Polikanov, Y.S. , Vazquez-Laslop, N.
Date: 2024-01-27 Method: X-RAY DIFFRACTION Resolution: 2.4 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 8VTU_1A , 8VTU_2A , 8VTU_1O , 8VTU_2O , 8VTU_1P , 8VTU_2P , 8VTU_1Q , 8VTU_2Q , 8VTU_1R , 8VTU_2R , 8VTU_1S , 8VTU_2S , 8VTU_1T , 8VTU_2T , 8VTU_1U , 8VTU_2U , 8VTU_1V , 8VTU_2V , 8VTU_1W , 8VTU_2W , 8VTU_1X , 8VTU_2X , 8VTU_1B , 8VTU_2B , 8VTU_1Y , 8VTU_2Y , 8VTU_1Z , 8VTU_2Z , 8VTU_10 , 8VTU_20 , 8VTU_11 , 8VTU_21 , 8VTU_12 , 8VTU_22 , 8VTU_13 , 8VTU_23 , 8VTU_14 , 8VTU_24 , 8VTU_15 , 8VTU_25 , 8VTU_16 , 8VTU_26 , 8VTU_17 , 8VTU_27 , 8VTU_1D , 8VTU_2D , 8VTU_18 , 8VTU_28 , 8VTU_19 , 8VTU_29 , 8VTU_1C , 8VTU_2C , 8VTU_1E , 8VTU_2E , 8VTU_1F , 8VTU_2F , 8VTU_1G , 8VTU_2G , 8VTU_1H , 8VTU_2H , 8VTU_1I , 8VTU_2I , 8VTU_1J , 8VTU_2J , 8VTU_1K , 8VTU_2K , 8VTU_1L , 8VTU_2L , 8VTU_1M , 8VTU_2M , 8VTU_1N , 8VTU_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with macrolone mcx-91, mrna, aminoacylated a-site phe-trnaphe, aminoacylated p-site fmet-trnamet, and deacylated e-site trnaphe at 2.55a resolution Deposition Author(s): Aleksandrova, E.V. , Alizadeh, F. , Klepacki, D. , Liang, J.-H. , Ma, C.-X. , Mankin, A.S. , Polikanov, Y.S. , Vazquez-Laslop, N.
Date: 2024-01-27 Method: X-RAY DIFFRACTION Resolution: 2.55 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 8VTV_1A , 8VTV_2A , 8VTV_1O , 8VTV_2O , 8VTV_1P , 8VTV_2P , 8VTV_1Q , 8VTV_2Q , 8VTV_1R , 8VTV_2R , 8VTV_1S , 8VTV_2S , 8VTV_1T , 8VTV_2T , 8VTV_1U , 8VTV_2U , 8VTV_1V , 8VTV_2V , 8VTV_1W , 8VTV_2W , 8VTV_1X , 8VTV_2X , 8VTV_1B , 8VTV_2B , 8VTV_1Y , 8VTV_2Y , 8VTV_1Z , 8VTV_2Z , 8VTV_10 , 8VTV_20 , 8VTV_11 , 8VTV_21 , 8VTV_12 , 8VTV_22 , 8VTV_13 , 8VTV_23 , 8VTV_14 , 8VTV_24 , 8VTV_15 , 8VTV_25 , 8VTV_16 , 8VTV_26 , 8VTV_17 , 8VTV_27 , 8VTV_1D , 8VTV_2D , 8VTV_18 , 8VTV_28 , 8VTV_19 , 8VTV_29 , 8VTV_1C , 8VTV_2C , 8VTV_1E , 8VTV_2E , 8VTV_1F , 8VTV_2F , 8VTV_1G , 8VTV_2G , 8VTV_1H , 8VTV_2H , 8VTV_1I , 8VTV_2I , 8VTV_1J , 8VTV_2J , 8VTV_1K , 8VTV_2K , 8VTV_1L , 8VTV_2L , 8VTV_1M , 8VTV_2M , 8VTV_1N , 8VTV_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with macrolone mcx-128 and protein y at 2.35a resolution Deposition Author(s): Aleksandrova, E.V. , Alizadeh, F. , Klepacki, D. , Liang, J.-H. , Ma, C.-X. , Mankin, A.S. , Polikanov, Y.S. , Vazquez-Laslop, N.
Date: 2024-01-27 Method: X-RAY DIFFRACTION Resolution: 2.35 Å Organism(s): Escherichia Coli K-12 , Thermus Thermophilus Hb8 Sequences Data: 8VTW_1A , 8VTW_2A , 8VTW_1O , 8VTW_2O , 8VTW_1P , 8VTW_2P , 8VTW_1Q , 8VTW_2Q , 8VTW_1R , 8VTW_2R , 8VTW_1S , 8VTW_2S , 8VTW_1T , 8VTW_2T , 8VTW_1U , 8VTW_2U , 8VTW_1V , 8VTW_2V , 8VTW_1W , 8VTW_2W , 8VTW_1X , 8VTW_2X , 8VTW_1B , 8VTW_2B , 8VTW_1Y , 8VTW_2Y , 8VTW_1Z , 8VTW_2Z , 8VTW_10 , 8VTW_20 , 8VTW_11 , 8VTW_21 , 8VTW_12 , 8VTW_22 , 8VTW_13 , 8VTW_23 , 8VTW_14 , 8VTW_24 , 8VTW_15 , 8VTW_25 , 8VTW_16 , 8VTW_26 , 8VTW_17 , 8VTW_27 , 8VTW_1D , 8VTW_2D , 8VTW_18 , 8VTW_28 , 8VTW_19 , 8VTW_29 , 8VTW_1C , 8VTW_2C , 8VTW_1E , 8VTW_2E , 8VTW_1F , 8VTW_2F , 8VTW_1G , 8VTW_2G , 8VTW_1H , 8VTW_2H , 8VTW_1I , 8VTW_2I , 8VTW_1J , 8VTW_2J , 8VTW_1K , 8VTW_2K , 8VTW_1L , 8VTW_2L , 8VTW_1M , 8VTW_2M , 8VTW_1N , 8VTW_2N
Crystal structure of the a2058-n6-dimethylated thermus thermophilus 70s ribosome in complex with macrolone mcx-128, mrna, aminoacylated a-site phe-trnaphe, aminoacylated p-site fmet-trnamet, and deacylated e-site trnaphe at 2.40a resolution Deposition Author(s): Aleksandrova, E.V. , Alizadeh, F. , Klepacki, D. , Liang, J.-H. , Ma, C.-X. , Mankin, A.S. , Polikanov, Y.S. , Vazquez-Laslop, N.
Date: 2024-01-27 Method: X-RAY DIFFRACTION Resolution: 2.4 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 8VTX_1A , 8VTX_2A , 8VTX_1O , 8VTX_2O , 8VTX_1P , 8VTX_2P , 8VTX_1Q , 8VTX_2Q , 8VTX_1R , 8VTX_2R , 8VTX_1S , 8VTX_2S , 8VTX_1T , 8VTX_2T , 8VTX_1U , 8VTX_2U , 8VTX_1V , 8VTX_2V , 8VTX_1W , 8VTX_2W , 8VTX_1X , 8VTX_2X , 8VTX_1B , 8VTX_2B , 8VTX_1Y , 8VTX_2Y , 8VTX_1Z , 8VTX_2Z , 8VTX_10 , 8VTX_20 , 8VTX_11 , 8VTX_21 , 8VTX_12 , 8VTX_22 , 8VTX_13 , 8VTX_23 , 8VTX_14 , 8VTX_24 , 8VTX_15 , 8VTX_25 , 8VTX_16 , 8VTX_26 , 8VTX_17 , 8VTX_27 , 8VTX_1D , 8VTX_2D , 8VTX_18 , 8VTX_28 , 8VTX_19 , 8VTX_29 , 8VTX_1C , 8VTX_2C , 8VTX_1E , 8VTX_2E , 8VTX_1F , 8VTX_2F , 8VTX_1G , 8VTX_2G , 8VTX_1H , 8VTX_2H , 8VTX_1I , 8VTX_2I , 8VTX_1J , 8VTX_2J , 8VTX_1K , 8VTX_2K , 8VTX_1L , 8VTX_2L , 8VTX_1M , 8VTX_2M , 8VTX_1N , 8VTX_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with ciprofloxacin and protein y at 2.60a resolution Deposition Author(s): Aleksandrova, E.V. , Alizadeh, F. , Klepacki, D. , Liang, J.-H. , Ma, C.-X. , Mankin, A.S. , Polikanov, Y.S. , Vazquez-Laslop, N.
Date: 2024-01-27 Method: X-RAY DIFFRACTION Resolution: 2.6 Å Organism(s): Escherichia Coli K-12 , Thermus Thermophilus Hb8 Sequences Data: 8VTY_1A , 8VTY_2A , 8VTY_1O , 8VTY_2O , 8VTY_1P , 8VTY_2P , 8VTY_1Q , 8VTY_2Q , 8VTY_1R , 8VTY_2R , 8VTY_1S , 8VTY_2S , 8VTY_1T , 8VTY_2T , 8VTY_1U , 8VTY_2U , 8VTY_1V , 8VTY_2V , 8VTY_1W , 8VTY_2W , 8VTY_1X , 8VTY_2X , 8VTY_1B , 8VTY_2B , 8VTY_1Y , 8VTY_2Y , 8VTY_1Z , 8VTY_2Z , 8VTY_10 , 8VTY_20 , 8VTY_11 , 8VTY_21 , 8VTY_12 , 8VTY_22 , 8VTY_13 , 8VTY_23 , 8VTY_14 , 8VTY_24 , 8VTY_15 , 8VTY_25 , 8VTY_16 , 8VTY_26 , 8VTY_17 , 8VTY_27 , 8VTY_1D , 8VTY_2D , 8VTY_18 , 8VTY_28 , 8VTY_19 , 8VTY_29 , 8VTY_1C , 8VTY_2C , 8VTY_1E , 8VTY_2E , 8VTY_1F , 8VTY_2F , 8VTY_1G , 8VTY_2G , 8VTY_1H , 8VTY_2H , 8VTY_1I , 8VTY_2I , 8VTY_1J , 8VTY_2J , 8VTY_1K , 8VTY_2K , 8VTY_1L , 8VTY_2L , 8VTY_1M , 8VTY_2M , 8VTY_1N , 8VTY_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with berberine analog of chloramphenicol cam-ber, mrna, deacylated a- and e-site trnaphe, and deacylated p-site trnamet at 2.80a resolution Deposition Author(s): Batool, Z. , Bogdanov, A.A. , Lukianov, D.A. , Osterman, I.A. , Paranjpe, M.N. , Pavlova, J.A. , Polikanov, Y.S. , Sumbatyan, N.V. , Tereshchenkov, A.G.
Date: 2024-03-11 Method: X-RAY DIFFRACTION Resolution: 2.8 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 9B00_1A , 9B00_2A , 9B00_1O , 9B00_2O , 9B00_1P , 9B00_2P , 9B00_1Q , 9B00_2Q , 9B00_1R , 9B00_2R , 9B00_1S , 9B00_2S , 9B00_1T , 9B00_2T , 9B00_1U , 9B00_2U , 9B00_1V , 9B00_2V , 9B00_1W , 9B00_2W , 9B00_1X , 9B00_2X , 9B00_1B , 9B00_2B , 9B00_1Y , 9B00_2Y , 9B00_1Z , 9B00_2Z , 9B00_10 , 9B00_20 , 9B00_11 , 9B00_21 , 9B00_12 , 9B00_22 , 9B00_13 , 9B00_23 , 9B00_14 , 9B00_24 , 9B00_15 , 9B00_25 , 9B00_16 , 9B00_26 , 9B00_17 , 9B00_27 , 9B00_1D , 9B00_2D , 9B00_18 , 9B00_28 , 9B00_19 , 9B00_29 , 9B00_1C , 9B00_2C , 9B00_1E , 9B00_2E , 9B00_1F , 9B00_2F , 9B00_1G , 9B00_2G , 9B00_1H , 9B00_2H , 9B00_1I , 9B00_2I , 9B00_1J , 9B00_2J , 9B00_1K , 9B00_2K , 9B00_1L , 9B00_2L , 9B00_1M , 9B00_2M , 9B00_1N , 9B00_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with bt-33, mrna, deacylated a-site trnaphe, aminoacylated p-site fmet-trnamet, and deacylated e-site trnaphe at 2.50a resolution Deposition Author(s): Aleksandrova, E.V. , Liu, R.Y. , Myers, A.G. , Polikanov, Y.S. , Purdy, M. , Ramkissoon, A. , See, D.N.Y. , Tresco, B.I.C. , Wu, K.J.Y.
Date: 2024-08-07 Method: X-RAY DIFFRACTION Resolution: 2.5 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 9D0J_1A , 9D0J_2A , 9D0J_1O , 9D0J_2O , 9D0J_1P , 9D0J_2P , 9D0J_1Q , 9D0J_2Q , 9D0J_1R , 9D0J_2R , 9D0J_1S , 9D0J_2S , 9D0J_1T , 9D0J_2T , 9D0J_1U , 9D0J_2U , 9D0J_1V , 9D0J_2V , 9D0J_1W , 9D0J_2W , 9D0J_1X , 9D0J_2X , 9D0J_1B , 9D0J_2B , 9D0J_1Y , 9D0J_2Y , 9D0J_1Z , 9D0J_2Z , 9D0J_10 , 9D0J_20 , 9D0J_11 , 9D0J_21 , 9D0J_12 , 9D0J_22 , 9D0J_13 , 9D0J_23 , 9D0J_14 , 9D0J_24 , 9D0J_15 , 9D0J_25 , 9D0J_16 , 9D0J_26 , 9D0J_17 , 9D0J_27 , 9D0J_1D , 9D0J_2D , 9D0J_18 , 9D0J_28 , 9D0J_19 , 9D0J_29 , 9D0J_1C , 9D0J_2C , 9D0J_1E , 9D0J_2E , 9D0J_1F , 9D0J_2F , 9D0J_1G , 9D0J_2G , 9D0J_1H , 9D0J_2H , 9D0J_1I , 9D0J_2I , 9D0J_1J , 9D0J_2J , 9D0J_1K , 9D0J_2K , 9D0J_1L , 9D0J_2L , 9D0J_1M , 9D0J_2M , 9D0J_1N , 9D0J_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with fva1 antimicrobial peptide, mrna, a-site release factor 1, and deacylated p-site and e-site trnaphe at 2.70a resolution Deposition Author(s): Aleksandrova, E.V. , Atkinson, G.C. , Baliga, C. , Huang, W. , Mankin, A.S. , Polikanov, Y.S. , Vazquez-Laslop, N.
Date: 2024-08-17 Method: X-RAY DIFFRACTION Resolution: 2.7 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 9D7R_1A , 9D7R_2A , 9D7R_1O , 9D7R_2O , 9D7R_1P , 9D7R_2P , 9D7R_1Q , 9D7R_2Q , 9D7R_1R , 9D7R_2R , 9D7R_1S , 9D7R_2S , 9D7R_1T , 9D7R_2T , 9D7R_1U , 9D7R_2U , 9D7R_1V , 9D7R_2V , 9D7R_1W , 9D7R_2W , 9D7R_1X , 9D7R_2X , 9D7R_1B , 9D7R_2B , 9D7R_1Y , 9D7R_2Y , 9D7R_1Z , 9D7R_2Z , 9D7R_10 , 9D7R_20 , 9D7R_11 , 9D7R_21 , 9D7R_12 , 9D7R_22 , 9D7R_13 , 9D7R_23 , 9D7R_14 , 9D7R_24 , 9D7R_15 , 9D7R_25 , 9D7R_16 , 9D7R_26 , 9D7R_17 , 9D7R_27 , 9D7R_1D , 9D7R_2D , 9D7R_18 , 9D7R_28 , 9D7R_19 , 9D7R_29 , 9D7R_1C , 9D7R_2C , 9D7R_1E , 9D7R_2E , 9D7R_1F , 9D7R_2F , 9D7R_1G , 9D7R_2G , 9D7R_1H , 9D7R_2H , 9D7R_1I , 9D7R_2I , 9D7R_1J , 9D7R_2J , 9D7R_1K , 9D7R_2K , 9D7R_1L , 9D7R_2L , 9D7R_1M , 9D7R_2M , 9D7R_1N , 9D7R_2N