Real space refined coordinates of the 30s and 50s subunits fitted into the low resolution cryo-em map of the initiation-like state of e. coli 70s ribosome Deposition Author(s): Agrawal, R.K. , Chapman, M.S. , Eswar, N. , Frank, J. , Gao, H. , Harvey, S.T. , Korostelev, A. , Sali, A. , Sengupta, J. , Stagg, S.M. , Valle, M. , Van Roey, P.
Date: 2003-05-06 Method: ELECTRON MICROSCOPY Resolution: 11.5 Å Organism(s): Escherichia Coli Sequences Data: 4V48_A0 , 4V48_AG , 4V48_AH , 4V48_AI , 4V48_AJ , 4V48_AK , 4V48_AL , 4V48_AM , 4V48_AN , 4V48_AO , 4V48_AQ , 4V48_A9 , 4V48_AR , 4V48_AS , 4V48_AT , 4V48_AU , 4V48_AW , 4V48_AX , 4V48_AZ , 4V48_A1 , 4V48_A4 , 4V48_BA , 4V48_A6 , 4V48_BB , 4V48_BC , 4V48_BD , 4V48_BE , 4V48_BF , 4V48_BG , 4V48_BH , 4V48_BI , 4V48_BJ , 4V48_BK , 4V48_AA , 4V48_BL , 4V48_BM , 4V48_BN , 4V48_BO , 4V48_BP , 4V48_BQ , 4V48_BR , 4V48_BS , 4V48_BT , 4V48_AB , 4V48_AC , 4V48_AD , 4V48_AE , 4V48_AF
Structure of the ribosomal 80s-eef2-sordarin complex from yeast obtained by docking atomic models for rna and protein components into a 11.7 a cryo-em map. Deposition Author(s): Andersen, G.R. , Ballesta, J.P.G. , Beckmann, R. , Frank, J. , Gomez-Lorenzo, M.G. , Grassucci, R.A. , Jorgensen, R. , Penczek, P.A. , Spahn, C.M.
Date: 2004-01-06 Method: ELECTRON MICROSCOPY Resolution: 11.7 Å Organism(s): Saccharomyces Cerevisiae Sequences Data: 4V4B_AA , 4V4B_AJ , 4V4B_AK , 4V4B_AL , 4V4B_AM , 4V4B_AN , 4V4B_AO , 4V4B_AQ , 4V4B_AS , 4V4B_B3 , 4V4B_B4 , 4V4B_AT , 4V4B_BA , 4V4B_BB , 4V4B_BC , 4V4B_BD , 4V4B_BE , 4V4B_BF , 4V4B_BG , 4V4B_BH , 4V4B_BI , 4V4B_BJ , 4V4B_AB , 4V4B_BK , 4V4B_BL , 4V4B_BM , 4V4B_BN , 4V4B_BO , 4V4B_BP , 4V4B_BQ , 4V4B_BR , 4V4B_BS , 4V4B_BT , 4V4B_AC , 4V4B_BU , 4V4B_BV , 4V4B_B0 , 4V4B_BW , 4V4B_BX , 4V4B_BY , 4V4B_BZ , 4V4B_B9 , 4V4B_AD , 4V4B_AE , 4V4B_AG , 4V4B_AH , 4V4B_AI
Structure of a pre-translocational e. coli ribosome obtained by fitting atomic models for rna and protein components into cryo-em map emd-1056 Deposition Author(s): Frank, J. , Mitra, K.
Date: 2006-05-09 Method: ELECTRON MICROSCOPY Resolution: 15.0 Å Organism(s): Escherichia Coli Sequences Data: 4V4V_AA , 4V4V_AI , 4V4V_AJ , 4V4V_AK , 4V4V_AL , 4V4V_AM , 4V4V_AN , 4V4V_AO , 4V4V_AP , 4V4V_AQ , 4V4V_AR , 4V4V_AU , 4V4V_AV , 4V4V_AW , 4V4V_AS , 4V4V_AT , 4V4V_B0 , 4V4V_B9 , 4V4V_B2 , 4V4V_B3 , 4V4V_B5 , 4V4V_BA , 4V4V_BB , 4V4V_BC , 4V4V_BD , 4V4V_AB , 4V4V_BE , 4V4V_BF , 4V4V_BG , 4V4V_BH , 4V4V_BI , 4V4V_BJ , 4V4V_BK , 4V4V_BL , 4V4V_BM , 4V4V_BN , 4V4V_AC , 4V4V_BO , 4V4V_BQ , 4V4V_BR , 4V4V_BS , 4V4V_BT , 4V4V_BU , 4V4V_BW , 4V4V_BX , 4V4V_BZ , 4V4V_B1 , 4V4V_AD , 4V4V_AE , 4V4V_AF , 4V4V_AG , 4V4V_AH
Structure of a secm-stalled e. coli ribosome complex obtained by fitting atomic models for rna and protein components into cryo-em map emd-1143 Deposition Author(s): Frank, J. , Mitra, K.
Date: 2006-05-09 Method: ELECTRON MICROSCOPY Resolution: 15.0 Å Organism(s): Escherichia Coli Sequences Data: 4V4W_AA , 4V4W_AI , 4V4W_AJ , 4V4W_AK , 4V4W_AL , 4V4W_AM , 4V4W_AN , 4V4W_AO , 4V4W_AP , 4V4W_AQ , 4V4W_AR , 4V4W_AU , 4V4W_AV , 4V4W_AW , 4V4W_AS , 4V4W_AT , 4V4W_B0 , 4V4W_B9 , 4V4W_B2 , 4V4W_B3 , 4V4W_B5 , 4V4W_BA , 4V4W_BB , 4V4W_BC , 4V4W_BD , 4V4W_AB , 4V4W_BE , 4V4W_BF , 4V4W_BG , 4V4W_BH , 4V4W_BI , 4V4W_BJ , 4V4W_BK , 4V4W_BL , 4V4W_BM , 4V4W_BN , 4V4W_AC , 4V4W_BO , 4V4W_BQ , 4V4W_BR , 4V4W_BS , 4V4W_BT , 4V4W_BU , 4V4W_BW , 4V4W_BX , 4V4W_BZ , 4V4W_B1 , 4V4W_AD , 4V4W_AE , 4V4W_AF , 4V4W_AG , 4V4W_AH
Ternary complex-bound e.coli 70s ribosome. Deposition Author(s): Baxter, W.T. , Ehrenberg, M. , Frank, J. , Grassucci, R.A. , Lebarron, J. , Nissen, P. , Schulten, K. , Sengupta, J. , Shaikh, T.R. , Trabuco, L.G. , Villa, E.
Date: 2008-12-11 Method: ELECTRON MICROSCOPY Resolution: 6.7 Å Organism(s): Escherichia Coli , Synthetic Construct Sequences Data: 4V69_AJ , 4V69_AS , 4V69_AT , 4V69_AU , 4V69_AB , 4V69_AC , 4V69_AD , 4V69_AE , 4V69_AF , 4V69_AG , 4V69_AH , 4V69_AK , 4V69_AI , 4V69_AA , 4V69_AY , 4V69_AW , 4V69_AX , 4V69_AZ , 4V69_AV , 4V69_B5 , 4V69_BI , 4V69_BJ , 4V69_AL , 4V69_BK , 4V69_BL , 4V69_BM , 4V69_BN , 4V69_BO , 4V69_BP , 4V69_BQ , 4V69_BR , 4V69_BS , 4V69_BT , 4V69_AM , 4V69_BU , 4V69_BV , 4V69_BW , 4V69_BX , 4V69_BY , 4V69_BC , 4V69_BZ , 4V69_B0 , 4V69_B1 , 4V69_B2 , 4V69_AN , 4V69_B3 , 4V69_B4 , 4V69_BD , 4V69_BE , 4V69_BF , 4V69_BG , 4V69_BH , 4V69_BB , 4V69_BA , 4V69_AO , 4V69_AP , 4V69_AQ , 4V69_AR
Structural insights into cognate vs. near-cognate discrimination during decoding. Deposition Author(s): Agirrezabala, X. , Frank, J. , Green, R. , Lei, J. , Ortiz-Meoz, R.F. , Schreiner, E. , Schulten, K. , Trabuco, L.G.
Date: 2011-01-07 Method: ELECTRON MICROSCOPY Resolution: 8.25 Å Organism(s): Escherichia Coli , Escherichia Coli Dh1 , Escherichia Coli K-12 , Escherichia Coli O157:H7 Sequences Data: 4V6K_AA , 4V6K_AJ , 4V6K_AK , 4V6K_AL , 4V6K_AM , 4V6K_AN , 4V6K_AO , 4V6K_AP , 4V6K_AQ , 4V6K_AR , 4V6K_AS , 4V6K_AB , 4V6K_AT , 4V6K_AU , 4V6K_AV , 4V6K_AW , 4V6K_AX , 4V6K_AY , 4V6K_AZ , 4V6K_AC , 4V6K_AD , 4V6K_AE , 4V6K_AF , 4V6K_AG , 4V6K_BA , 4V6K_BB , 4V6K_BE , 4V6K_BC , 4V6K_BD , 4V6K_BF , 4V6K_BG , 4V6K_BH , 4V6K_BI , 4V6K_BJ , 4V6K_BK , 4V6K_BL , 4V6K_BM , 4V6K_BN , 4V6K_BO , 4V6K_BP , 4V6K_BQ , 4V6K_BR , 4V6K_BS , 4V6K_BT , 4V6K_BU , 4V6K_BV , 4V6K_BW , 4V6K_BX , 4V6K_BY , 4V6K_AH , 4V6K_AI
Structural insights into cognate vs. near-cognate discrimination during decoding. Deposition Author(s): Agirrezabala, X. , Frank, J. , Green, R. , Lei, J. , Ortiz-Meoz, R.F. , Schreiner, E. , Schulten, K. , Trabuco, L.G.
Date: 2011-01-07 Method: ELECTRON MICROSCOPY Resolution: 13.2 Å Organism(s): Escherichia Coli , Escherichia Coli Dh1 , Escherichia Coli K-12 , Escherichia Coli O157:H7 Sequences Data: 4V6L_AA , 4V6L_AK , 4V6L_AL , 4V6L_AM , 4V6L_AN , 4V6L_AO , 4V6L_AP , 4V6L_AQ , 4V6L_AR , 4V6L_AS , 4V6L_AT , 4V6L_AB , 4V6L_AE , 4V6L_AU , 4V6L_AV , 4V6L_AW , 4V6L_AX , 4V6L_AY , 4V6L_BA , 4V6L_BB , 4V6L_BC , 4V6L_BD , 4V6L_BE , 4V6L_AC , 4V6L_BF , 4V6L_BG , 4V6L_BH , 4V6L_BI , 4V6L_BJ , 4V6L_BK , 4V6L_BL , 4V6L_BM , 4V6L_BN , 4V6L_BO , 4V6L_AD , 4V6L_BP , 4V6L_BQ , 4V6L_BR , 4V6L_BS , 4V6L_BT , 4V6L_BU , 4V6L_BV , 4V6L_BW , 4V6L_BX , 4V6L_BY , 4V6L_AF , 4V6L_BZ , 4V6L_AG , 4V6L_AH , 4V6L_AI , 4V6L_AJ
Structural characterization of mrna-trna translocation intermediates (50s ribosome of class2 of the six classes) Deposition Author(s): Agirrezabala, X. , Frank, J. , Fu, J. , Green, R. , Liao, H. , Ortiz-Meoz, R.F. , Schreiner, E. , Schulten, K.
Date: 2011-12-07 Method: ELECTRON MICROSCOPY Resolution: 12.1 Å Organism(s): Escherichia Coli , Sulfolobus Acidocaldarius Sequences Data: 4V6N_AA , 4V6N_AJ , 4V6N_AK , 4V6N_AL , 4V6N_AM , 4V6N_AN , 4V6N_AO , 4V6N_AP , 4V6N_AQ , 4V6N_AR , 4V6N_AS , 4V6N_AB , 4V6N_AT , 4V6N_AU , 4V6N_AV , 4V6N_AW , 4V6N_AX , 4V6N_AY , 4V6N_AZ , 4V6N_A0 , 4V6N_A1 , 4V6N_A2 , 4V6N_AC , 4V6N_A3 , 4V6N_A4 , 4V6N_A5 , 4V6N_A6 , 4V6N_A7 , 4V6N_BA , 4V6N_BB , 4V6N_BC , 4V6N_BD , 4V6N_BE , 4V6N_AD , 4V6N_BF , 4V6N_BG , 4V6N_BH , 4V6N_BI , 4V6N_BJ , 4V6N_BK , 4V6N_BL , 4V6N_BM , 4V6N_BN , 4V6N_BO , 4V6N_AE , 4V6N_BP , 4V6N_BQ , 4V6N_BR , 4V6N_BS , 4V6N_BT , 4V6N_BU , 4V6N_BV , 4V6N_BW , 4V6N_BX , 4V6N_AF , 4V6N_AG , 4V6N_AH , 4V6N_AI
Structural characterization of mrna-trna translocation intermediates (class 4a of the six classes) Deposition Author(s): Agirrezabala, X. , Frank, J. , Fu, J. , Green, R. , Liao, H. , Ortiz-Meoz, R.F. , Schreiner, E. , Schulten, K.
Date: 2011-12-07 Method: ELECTRON MICROSCOPY Resolution: 14.7 Å Organism(s): Escherichia Coli , Sulfolobus Acidocaldarius Sequences Data: 4V6O_AA , 4V6O_AJ , 4V6O_AK , 4V6O_AL , 4V6O_AM , 4V6O_AN , 4V6O_AO , 4V6O_AP , 4V6O_AQ , 4V6O_AR , 4V6O_AS , 4V6O_AB , 4V6O_AT , 4V6O_AU , 4V6O_AV , 4V6O_AW , 4V6O_AX , 4V6O_BA , 4V6O_BB , 4V6O_BC , 4V6O_BD , 4V6O_BE , 4V6O_AC , 4V6O_BF , 4V6O_BG , 4V6O_BH , 4V6O_BI , 4V6O_BJ , 4V6O_BK , 4V6O_BL , 4V6O_BM , 4V6O_BN , 4V6O_BO , 4V6O_AD , 4V6O_BP , 4V6O_BQ , 4V6O_BR , 4V6O_BS , 4V6O_BT , 4V6O_BU , 4V6O_BV , 4V6O_BW , 4V6O_BX , 4V6O_BY , 4V6O_AE , 4V6O_BZ , 4V6O_B0 , 4V6O_B1 , 4V6O_B2 , 4V6O_B3 , 4V6O_B4 , 4V6O_B5 , 4V6O_B6 , 4V6O_B7 , 4V6O_AF , 4V6O_AG , 4V6O_AH , 4V6O_AI
Structural characterization of mrna-trna translocation intermediates (class 4b of the six classes) Deposition Author(s): Agirrezabala, X. , Frank, J. , Fu, J. , Green, R. , Liao, H. , Ortiz-Meoz, R.F. , Schreiner, E. , Schulten, K.
Date: 2011-12-08 Method: ELECTRON MICROSCOPY Resolution: 13.5 Å Organism(s): Escherichia Coli , Sulfolobus Acidocaldarius Sequences Data: 4V6P_AA , 4V6P_AJ , 4V6P_AK , 4V6P_AL , 4V6P_AM , 4V6P_AN , 4V6P_AO , 4V6P_AP , 4V6P_AQ , 4V6P_AR , 4V6P_AS , 4V6P_AB , 4V6P_AT , 4V6P_AU , 4V6P_AV , 4V6P_AW , 4V6P_AX , 4V6P_BA , 4V6P_BB , 4V6P_BC , 4V6P_BD , 4V6P_BE , 4V6P_AC , 4V6P_BF , 4V6P_BG , 4V6P_BH , 4V6P_BI , 4V6P_BJ , 4V6P_BK , 4V6P_BL , 4V6P_BM , 4V6P_BN , 4V6P_BO , 4V6P_AD , 4V6P_BP , 4V6P_BQ , 4V6P_BR , 4V6P_BS , 4V6P_BT , 4V6P_BU , 4V6P_BV , 4V6P_BW , 4V6P_BX , 4V6P_BY , 4V6P_AE , 4V6P_BZ , 4V6P_B0 , 4V6P_B1 , 4V6P_B2 , 4V6P_B3 , 4V6P_B4 , 4V6P_B5 , 4V6P_B6 , 4V6P_B7 , 4V6P_AF , 4V6P_AG , 4V6P_AH , 4V6P_AI