Cryo-em structure of native otu2-bound ubiquitinated 48s initiation complex (partial) Deposition Author(s): Becker, T. , Beckmann, R. , Berninghausen, O. , Buschauer, R. , Cheng, J. , Ikeuchi, K.
Date: 2023-01-24 Method: ELECTRON MICROSCOPY Resolution: 3.3 Å Organism(s): Saccharomyces Cerevisiae , Saccharomyces Cerevisiae W303 Sequences Data: 8CAS_P , 8CAS_Z , 8CAS_A , 8CAS_B , 8CAS_C , 8CAS_D , 8CAS_E , 8CAS_F , 8CAS_G , 8CAS_Q , 8CAS_H , 8CAS_I , 8CAS_J , 8CAS_K , 8CAS_L , 8CAS_M , 8CAS_N , 8CAS_O , 8CAS_R , 8CAS_1 , 8CAS_3 , 8CAS_S , 8CAS_2 , 8CAS_Y , 8CAS_X , 8CAS_T , 8CAS_U , 8CAS_V , 8CAS_W
Cryo-em structure of otu2-bound cytoplasmic pre-40s ribosome biogenesis complex Deposition Author(s): Becker, T. , Beckmann, R. , Berninghausen, O. , Buschauer, R. , Cheng, J. , Ikeuchi, K.
Date: 2023-01-25 Method: ELECTRON MICROSCOPY Resolution: 3.8 Å Organism(s): Saccharomyces Cerevisiae , Saccharomyces Cerevisiae W303 Sequences Data: 8CBJ_B , 8CBJ_L , 8CBJ_A , 8CBJ_C , 8CBJ_D , 8CBJ_E , 8CBJ_F , 8CBJ_G , 8CBJ_H , 8CBJ_I , 8CBJ_J , 8CBJ_M , 8CBJ_N , 8CBJ_O , 8CBJ_P , 8CBJ_Q , 8CBJ_R , 8CBJ_S , 8CBJ_T , 8CBJ_U , 8CBJ_V , 8CBJ_W , 8CBJ_X , 8CBJ_Y , 8CBJ_Z , 8CBJ_2 , 8CBJ_K
80s s. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (pre-h1) complex Deposition Author(s): Jenner, L. , Milicevic, N. , Myasnikov, A. , Yusupov, M. , Yusupova, G.
Date: 2023-01-27 Method: ELECTRON MICROSCOPY Resolution: 1.97 Å Organism(s): Escherichia Coli , Saccharomyces Cerevisiae , Synthetic Construct Sequences Data: 8CCS_0 , 8CCS_A , 8CCS_AA , 8CCS_B , 8CCS_BB , 8CCS_C , 8CCS_CC , 8CCS_D , 8CCS_DD , 8CCS_1 , 8CCS_E , 8CCS_EE , 8CCS_F , 8CCS_FF , 8CCS_G , 8CCS_GG , 8CCS_H , 8CCS_HH , 8CCS_2 , 8CCS_I , 8CCS_II , 8CCS_J , 8CCS_JJ , 8CCS_K , 8CCS_KK , 8CCS_L , 8CCS_LL , 8CCS_M , 8CCS_MM , 8CCS_3 , 8CCS_N , 8CCS_NN , 8CCS_O , 8CCS_OO , 8CCS_P , 8CCS_PP , 8CCS_Q , 8CCS_QQ , 8CCS_R , 8CCS_4 , 8CCS_S , 8CCS_T , 8CCS_U , 8CCS_V , 8CCS_W , 8CCS_X , 8CCS_Y , 8CCS_Z , 8CCS_5 , 8CCS_6 , 8CCS_7 , 8CCS_8
80s s. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (pre-h2) complex Deposition Author(s): Jenner, L. , Milicevic, N. , Myasnikov, A. , Yusupov, M. , Yusupova, G.
Date: 2023-01-31 Method: ELECTRON MICROSCOPY Resolution: 2.72 Å Organism(s): Escherichia Coli , Saccharomyces Cerevisiae Sequences Data: 8CDL_0 , 8CDL_A , 8CDL_AA , 8CDL_B , 8CDL_BB , 8CDL_C , 8CDL_CC , 8CDL_D , 8CDL_DD , 8CDL_1 , 8CDL_E , 8CDL_EE , 8CDL_F , 8CDL_FF , 8CDL_G , 8CDL_GG , 8CDL_H , 8CDL_HH , 8CDL_2 , 8CDL_I , 8CDL_II , 8CDL_J , 8CDL_JJ , 8CDL_K , 8CDL_KK , 8CDL_L , 8CDL_LL , 8CDL_M , 8CDL_MM , 8CDL_3 , 8CDL_N , 8CDL_NN , 8CDL_O , 8CDL_OO , 8CDL_P , 8CDL_PP , 8CDL_Q , 8CDL_QQ , 8CDL_R , 8CDL_4 , 8CDL_S , 8CDL_T , 8CDL_U , 8CDL_V , 8CDL_W , 8CDL_X , 8CDL_Y , 8CDL_Z , 8CDL_5 , 8CDL_6 , 8CDL_7 , 8CDL_8
Translocation intermediate 2 (ti-2) of 80s s. cerevisiae ribosome with ligands and eef2 in the presence of sordarin Deposition Author(s): Jenner, L. , Milicevic, N. , Myasnikov, A. , Yusupov, M. , Yusupova, G.
Date: 2023-01-31 Method: ELECTRON MICROSCOPY Resolution: 2.04 Å Organism(s): Escherichia Coli , Saccharomyces Cerevisiae , Synthetic Construct Sequences Data: 8CDR_0 , 8CDR_A , 8CDR_AA , 8CDR_B , 8CDR_BB , 8CDR_C , 8CDR_CC , 8CDR_D , 8CDR_1 , 8CDR_DD , 8CDR_E , 8CDR_EE , 8CDR_F , 8CDR_FF , 8CDR_G , 8CDR_GG , 8CDR_H , 8CDR_2 , 8CDR_HH , 8CDR_I , 8CDR_II , 8CDR_J , 8CDR_JJ , 8CDR_K , 8CDR_KK , 8CDR_L , 8CDR_LL , 8CDR_M , 8CDR_3 , 8CDR_MM , 8CDR_N , 8CDR_NN , 8CDR_O , 8CDR_OO , 8CDR_P , 8CDR_PP , 8CDR_Q , 8CDR_QQ , 8CDR_4 , 8CDR_R , 8CDR_S , 8CDR_T , 8CDR_U , 8CDR_V , 8CDR_W , 8CDR_X , 8CDR_Y , 8CDR_Z , 8CDR_5 , 8CDR_6 , 8CDR_7 , 8CDR_8
Translocation intermediate 4 (ti-4) of 80s s. cerevisiae ribosome with ligands and eef2 in the presence of sordarin Deposition Author(s): Jenner, L. , Milicevic, N. , Myasnikov, A. , Yusupov, M. , Yusupova, G.
Date: 2023-02-01 Method: ELECTRON MICROSCOPY Resolution: 2.05 Å Organism(s): Escherichia Coli , Saccharomyces Cerevisiae , Synthetic Construct Sequences Data: 8CEH_0 , 8CEH_A , 8CEH_AA , 8CEH_B , 8CEH_BB , 8CEH_C , 8CEH_CC , 8CEH_D , 8CEH_1 , 8CEH_DD , 8CEH_E , 8CEH_EE , 8CEH_F , 8CEH_FF , 8CEH_G , 8CEH_GG , 8CEH_H , 8CEH_2 , 8CEH_HH , 8CEH_I , 8CEH_II , 8CEH_J , 8CEH_JJ , 8CEH_K , 8CEH_KK , 8CEH_L , 8CEH_LL , 8CEH_M , 8CEH_3 , 8CEH_MM , 8CEH_N , 8CEH_NN , 8CEH_O , 8CEH_OO , 8CEH_P , 8CEH_PP , 8CEH_Q , 8CEH_QQ , 8CEH_4 , 8CEH_R , 8CEH_S , 8CEH_T , 8CEH_U , 8CEH_V , 8CEH_W , 8CEH_X , 8CEH_Y , 8CEH_Z , 8CEH_5 , 8CEH_6 , 8CEH_7 , 8CEH_8
Yeast rna polymerase ii transcription pre-initiation complex with core mediator Deposition Author(s): Cramer, P. , Schilbach, S. , Wang, H.
Date: 2023-02-02 Method: ELECTRON MICROSCOPY Resolution: 3.0 Å Organism(s): Saccharomyces Cerevisiae , Synthetic Construct Sequences Data: 8CEN_0 , 8CEN_B , 8CEN_C , 8CEN_D , 8CEN_E , 8CEN_F , 8CEN_G , 8CEN_H , 8CEN_I , 8CEN_J , 8CEN_K , 8CEN_1 , 8CEN_L , 8CEN_M , 8CEN_N , 8CEN_O , 8CEN_Q , 8CEN_R , 8CEN_T , 8CEN_U , 8CEN_V , 8CEN_W , 8CEN_2 , 8CEN_X , 8CEN_A , 8CEN_3 , 8CEN_P , 8CEN_4 , 8CEN_5 , 8CEN_6 , 8CEN_7
Yeast rna polymerase ii transcription pre-initiation complex with core mediator and the +1 nucleosome Deposition Author(s): Cramer, P. , Wang, H.
Date: 2023-02-02 Method: ELECTRON MICROSCOPY Resolution: 3.6 Å Organism(s): Saccharomyces Cerevisiae , Xenopus Laevis , Synthetic Construct Sequences Data: 8CEO_0 , 8CEO_B , 8CEO_C , 8CEO_D , 8CEO_E , 8CEO_F , 8CEO_G , 8CEO_H , 8CEO_I , 8CEO_J , 8CEO_K , 8CEO_1 , 8CEO_L , 8CEO_M , 8CEO_N , 8CEO_O , 8CEO_Q , 8CEO_R , 8CEO_T , 8CEO_U , 8CEO_V , 8CEO_W , 8CEO_2 , 8CEO_X , 8CEO_A , 8CEO_3 , 8CEO_P , 8CEO_S , 8CEO_4 , 8CEO_Y , 8CEO_5 , 8CEO_6 , 8CEO_7
Translocation intermediate 1 (ti-1) of 80s s. cerevisiae ribosome with ligands and eef2 in the presence of sordarin Deposition Author(s): Jenner, L. , Milicevic, N. , Myasnikov, A. , Yusupov, M. , Yusupova, G.
Date: 2023-02-02 Method: ELECTRON MICROSCOPY Resolution: 2.71 Å Organism(s): Escherichia Coli , Saccharomyces Cerevisiae , Synthetic Construct Sequences Data: 8CF5_0 , 8CF5_A , 8CF5_AA , 8CF5_B , 8CF5_BB , 8CF5_C , 8CF5_CC , 8CF5_D , 8CF5_1 , 8CF5_DD , 8CF5_E , 8CF5_EE , 8CF5_F , 8CF5_FF , 8CF5_G , 8CF5_GG , 8CF5_H , 8CF5_2 , 8CF5_HH , 8CF5_I , 8CF5_II , 8CF5_J , 8CF5_JJ , 8CF5_K , 8CF5_KK , 8CF5_L , 8CF5_LL , 8CF5_M , 8CF5_3 , 8CF5_MM , 8CF5_N , 8CF5_NN , 8CF5_O , 8CF5_OO , 8CF5_P , 8CF5_PP , 8CF5_Q , 8CF5_QQ , 8CF5_4 , 8CF5_R , 8CF5_S , 8CF5_T , 8CF5_U , 8CF5_V , 8CF5_W , 8CF5_X , 8CF5_Y , 8CF5_Z , 8CF5_5 , 8CF5_6 , 8CF5_7 , 8CF5_8
Translocation intermediate 3 (ti-3) of 80s s. cerevisiae ribosome with ligands and eef2 in the presence of sordarin Deposition Author(s): Jenner, L. , Milicevic, N. , Myasnikov, A. , Yusupov, M. , Yusupova, G.
Date: 2023-02-03 Method: ELECTRON MICROSCOPY Resolution: 2.57 Å Organism(s): Escherichia Coli , Saccharomyces Cerevisiae , Synthetic Construct Sequences Data: 8CG8_0 , 8CG8_A , 8CG8_AA , 8CG8_B , 8CG8_BB , 8CG8_C , 8CG8_CC , 8CG8_D , 8CG8_1 , 8CG8_DD , 8CG8_E , 8CG8_EE , 8CG8_F , 8CG8_FF , 8CG8_G , 8CG8_GG , 8CG8_H , 8CG8_2 , 8CG8_HH , 8CG8_I , 8CG8_II , 8CG8_J , 8CG8_JJ , 8CG8_K , 8CG8_KK , 8CG8_L , 8CG8_LL , 8CG8_M , 8CG8_3 , 8CG8_MM , 8CG8_N , 8CG8_NN , 8CG8_O , 8CG8_OO , 8CG8_P , 8CG8_PP , 8CG8_Q , 8CG8_QQ , 8CG8_4 , 8CG8_R , 8CG8_S , 8CG8_T , 8CG8_U , 8CG8_V , 8CG8_W , 8CG8_X , 8CG8_Y , 8CG8_Z , 8CG8_5 , 8CG8_6 , 8CG8_7 , 8CG8_8