Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with tylosin, mrna, deacylated a- and e-site trnaphe, and deacylated p-site trnamet at 2.70a resolution Deposition Author(s): Aleksandrova, E.V. , Atkinson, G.C. , Balasanyants, S.M. , Gregory, S.T. , Killeavy, E.E. , Myers, A.G. , Polikanov, Y.S. , Svetlov, M.S. , Syroegin, E.A. , Tresco, B.I.C. , Wu, K.J.Y.
Date: 2023-02-03 Method: X-RAY DIFFRACTION Resolution: 2.7 Å Organism(s): Adineta Vaga , Fragaria Ananassa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) Sequences Data: 8G2D_1A , 8G2D_2A , 8G2D_1O , 8G2D_2O , 8G2D_1P , 8G2D_2P , 8G2D_1Q , 8G2D_2Q , 8G2D_1R , 8G2D_2R , 8G2D_1S , 8G2D_2S , 8G2D_1T , 8G2D_2T , 8G2D_1U , 8G2D_2U , 8G2D_1V , 8G2D_2V , 8G2D_1W , 8G2D_2W , 8G2D_1X , 8G2D_2X , 8G2D_1B , 8G2D_2B , 8G2D_1Y , 8G2D_2Y , 8G2D_1Z , 8G2D_2Z , 8G2D_10 , 8G2D_20 , 8G2D_11 , 8G2D_21 , 8G2D_12 , 8G2D_22 , 8G2D_13 , 8G2D_23 , 8G2D_14 , 8G2D_24 , 8G2D_15 , 8G2D_25 , 8G2D_16 , 8G2D_26 , 8G2D_17 , 8G2D_27 , 8G2D_1D , 8G2D_2D , 8G2D_18 , 8G2D_28 , 8G2D_19 , 8G2D_29 , 8G2D_1C , 8G2D_2C , 8G2D_1E , 8G2D_2E , 8G2D_1F , 8G2D_2F , 8G2D_1G , 8G2D_2G , 8G2D_1H , 8G2D_2H , 8G2D_1I , 8G2D_2I , 8G2D_1J , 8G2D_2J , 8G2D_1K , 8G2D_2K , 8G2D_1L , 8G2D_2L , 8G2D_1M , 8G2D_2M , 8G2D_1N , 8G2D_2N
Crystal structure of the thermus thermophilus 70s ribosome in complex with protein y, a-site aminoacyl-trna analog acc-pmn, and p-site formyl-mai-tripeptidyl-trna analog acca-iamf at 2.65a resolution Deposition Author(s): Breuker, K. , Micura, R. , Polikanov, Y.S. , Syroegin, E.A. , Thaler, J.
Date: 2023-06-22 Method: X-RAY DIFFRACTION Resolution: 2.65 Å Organism(s): Sphingobium Sp. (Strain Nbrc 103272 / Syk-6) , Fragaria Ananassa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) Sequences Data: 8T8B_1A , 8T8B_2A , 8T8B_1O , 8T8B_2O , 8T8B_1P , 8T8B_2P , 8T8B_1Q , 8T8B_2Q , 8T8B_1R , 8T8B_2R , 8T8B_1S , 8T8B_2S , 8T8B_1T , 8T8B_2T , 8T8B_1U , 8T8B_2U , 8T8B_1V , 8T8B_2V , 8T8B_1W , 8T8B_2W , 8T8B_1X , 8T8B_2X , 8T8B_1B , 8T8B_2B , 8T8B_1Y , 8T8B_2Y , 8T8B_1Z , 8T8B_2Z , 8T8B_10 , 8T8B_20 , 8T8B_11 , 8T8B_21 , 8T8B_12 , 8T8B_22 , 8T8B_13 , 8T8B_23 , 8T8B_14 , 8T8B_24 , 8T8B_15 , 8T8B_25 , 8T8B_16 , 8T8B_26 , 8T8B_17 , 8T8B_27 , 8T8B_1D , 8T8B_2D , 8T8B_18 , 8T8B_28 , 8T8B_19 , 8T8B_29 , 8T8B_1C , 8T8B_2C , 8T8B_1E , 8T8B_2E , 8T8B_1F , 8T8B_2F , 8T8B_1G , 8T8B_2G , 8T8B_1H , 8T8B_2H , 8T8B_1I , 8T8B_2I , 8T8B_1J , 8T8B_2J , 8T8B_1K , 8T8B_2K , 8T8B_1L , 8T8B_2L , 8T8B_1M , 8T8B_2M , 8T8B_1N , 8T8B_2N
Crystal structure of the thermus thermophilus 70s ribosome in complex with protein y, a-site aminoacyl-trna analog acc-pmn, and p-site formyl-mfi-tripeptidyl-trna analog acca-ifmf at 2.60a resolution Deposition Author(s): Breuker, K. , Micura, R. , Polikanov, Y.S. , Syroegin, E.A. , Thaler, J.
Date: 2023-06-22 Method: X-RAY DIFFRACTION Resolution: 2.6 Å Organism(s): Sphingobium Sp. (Strain Nbrc 103272 / Syk-6) , Fragaria Ananassa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) Sequences Data: 8T8C_1A , 8T8C_2A , 8T8C_1O , 8T8C_2O , 8T8C_1P , 8T8C_2P , 8T8C_1Q , 8T8C_2Q , 8T8C_1R , 8T8C_2R , 8T8C_1S , 8T8C_2S , 8T8C_1T , 8T8C_2T , 8T8C_1U , 8T8C_2U , 8T8C_1V , 8T8C_2V , 8T8C_1W , 8T8C_2W , 8T8C_1X , 8T8C_2X , 8T8C_1B , 8T8C_2B , 8T8C_1Y , 8T8C_2Y , 8T8C_1Z , 8T8C_2Z , 8T8C_10 , 8T8C_20 , 8T8C_11 , 8T8C_21 , 8T8C_12 , 8T8C_22 , 8T8C_13 , 8T8C_23 , 8T8C_14 , 8T8C_24 , 8T8C_15 , 8T8C_25 , 8T8C_16 , 8T8C_26 , 8T8C_17 , 8T8C_27 , 8T8C_1D , 8T8C_2D , 8T8C_18 , 8T8C_28 , 8T8C_19 , 8T8C_29 , 8T8C_1C , 8T8C_2C , 8T8C_1E , 8T8C_2E , 8T8C_1F , 8T8C_2F , 8T8C_1G , 8T8C_2G , 8T8C_1H , 8T8C_2H , 8T8C_1I , 8T8C_2I , 8T8C_1J , 8T8C_2J , 8T8C_1K , 8T8C_2K , 8T8C_1L , 8T8C_2L , 8T8C_1M , 8T8C_2M , 8T8C_1N , 8T8C_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with cresomycin, mrna, deacylated a-site trnaphe, aminoacylated p-site fmet-trnamet, and deacylated e-site trnaphe at 2.70a resolution Deposition Author(s): Aleksandrova, E.V. , Dittemore, G.A. , Liow, P. , Liu, R.Y. , Mitcheltree, M.J. , Myers, A.G. , Polikanov, Y.S. , Ramkissoon, A. , See, D.N.Y. , Svetlov, M.S. , Syroegin, E.A. , Testolin, G. , Tresco, B.I.C. , Wu, K.J.Y. , Yu, M.
Date: 2023-09-28 Method: X-RAY DIFFRACTION Resolution: 2.7 Å Organism(s): Adineta Vaga , Fragaria Ananassa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) Sequences Data: 8UD6_1A , 8UD6_2A , 8UD6_1O , 8UD6_2O , 8UD6_1P , 8UD6_2P , 8UD6_1Q , 8UD6_2Q , 8UD6_1R , 8UD6_2R , 8UD6_1S , 8UD6_2S , 8UD6_1T , 8UD6_2T , 8UD6_1U , 8UD6_2U , 8UD6_1V , 8UD6_2V , 8UD6_1W , 8UD6_2W , 8UD6_1X , 8UD6_2X , 8UD6_1B , 8UD6_2B , 8UD6_1Y , 8UD6_2Y , 8UD6_1Z , 8UD6_2Z , 8UD6_10 , 8UD6_20 , 8UD6_11 , 8UD6_21 , 8UD6_12 , 8UD6_22 , 8UD6_13 , 8UD6_23 , 8UD6_14 , 8UD6_24 , 8UD6_15 , 8UD6_25 , 8UD6_16 , 8UD6_26 , 8UD6_17 , 8UD6_27 , 8UD6_1D , 8UD6_2D , 8UD6_18 , 8UD6_28 , 8UD6_19 , 8UD6_29 , 8UD6_1C , 8UD6_2C , 8UD6_1E , 8UD6_2E , 8UD6_1F , 8UD6_2F , 8UD6_1G , 8UD6_2G , 8UD6_1H , 8UD6_2H , 8UD6_1I , 8UD6_2I , 8UD6_1J , 8UD6_2J , 8UD6_1K , 8UD6_2K , 8UD6_1L , 8UD6_2L , 8UD6_1M , 8UD6_2M , 8UD6_1N , 8UD6_2N
Crystal structure of the a2058-n6-dimethylated thermus thermophilus 70s ribosome in complex with cresomycin, mrna, deacylated a-site trnaphe, aminoacylated p-site fmet-trnamet, and deacylated e-site trnaphe at 2.70a resolution Deposition Author(s): Aleksandrova, E.V. , Dittemore, G.A. , Liow, P. , Liu, R.Y. , Mitcheltree, M.J. , Myers, A.G. , Polikanov, Y.S. , Ramkissoon, A. , See, D.N.Y. , Svetlov, M.S. , Syroegin, E.A. , Testolin, G. , Tresco, B.I.C. , Wu, K.J.Y. , Yu, M.
Date: 2023-09-28 Method: X-RAY DIFFRACTION Resolution: 2.55 Å Organism(s): Adineta Vaga , Fragaria Ananassa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) Sequences Data: 8UD7_1A , 8UD7_2A , 8UD7_1O , 8UD7_2O , 8UD7_1P , 8UD7_2P , 8UD7_1Q , 8UD7_2Q , 8UD7_1R , 8UD7_2R , 8UD7_1S , 8UD7_2S , 8UD7_1T , 8UD7_2T , 8UD7_1U , 8UD7_2U , 8UD7_1V , 8UD7_2V , 8UD7_1W , 8UD7_2W , 8UD7_1X , 8UD7_2X , 8UD7_1B , 8UD7_2B , 8UD7_1Y , 8UD7_2Y , 8UD7_1Z , 8UD7_2Z , 8UD7_10 , 8UD7_20 , 8UD7_11 , 8UD7_21 , 8UD7_12 , 8UD7_22 , 8UD7_13 , 8UD7_23 , 8UD7_14 , 8UD7_24 , 8UD7_15 , 8UD7_25 , 8UD7_16 , 8UD7_26 , 8UD7_17 , 8UD7_27 , 8UD7_1D , 8UD7_2D , 8UD7_18 , 8UD7_28 , 8UD7_19 , 8UD7_29 , 8UD7_1C , 8UD7_2C , 8UD7_1E , 8UD7_2E , 8UD7_1F , 8UD7_2F , 8UD7_1G , 8UD7_2G , 8UD7_1H , 8UD7_2H , 8UD7_1I , 8UD7_2I , 8UD7_1J , 8UD7_2J , 8UD7_1K , 8UD7_2K , 8UD7_1L , 8UD7_2L , 8UD7_1M , 8UD7_2M , 8UD7_1N , 8UD7_2N
Crystal structure of the a2503-c2,c8-dimethylated thermus thermophilus 70s ribosome in complex with cresomycin, mrna, deacylated a-site trnaphe, aminoacylated p-site fmet-trnamet, and deacylated e-site trnaphe at 2.70a resolution Deposition Author(s): Aleksandrova, E.V. , Dittemore, G.A. , Liow, P. , Liu, R.Y. , Mitcheltree, M.J. , Myers, A.G. , Polikanov, Y.S. , Ramkissoon, A. , See, D.N.Y. , Svetlov, M.S. , Syroegin, E.A. , Testolin, G. , Tresco, B.I.C. , Wu, K.J.Y. , Yu, M.
Date: 2023-09-28 Method: X-RAY DIFFRACTION Resolution: 2.6 Å Organism(s): Adineta Vaga , Fragaria Ananassa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) Sequences Data: 8UD8_1A , 8UD8_2A , 8UD8_1O , 8UD8_2O , 8UD8_1P , 8UD8_2P , 8UD8_1Q , 8UD8_2Q , 8UD8_1R , 8UD8_2R , 8UD8_1S , 8UD8_2S , 8UD8_1T , 8UD8_2T , 8UD8_1U , 8UD8_2U , 8UD8_1V , 8UD8_2V , 8UD8_1W , 8UD8_2W , 8UD8_1X , 8UD8_2X , 8UD8_1B , 8UD8_2B , 8UD8_1Y , 8UD8_2Y , 8UD8_1Z , 8UD8_2Z , 8UD8_10 , 8UD8_20 , 8UD8_11 , 8UD8_21 , 8UD8_12 , 8UD8_22 , 8UD8_13 , 8UD8_23 , 8UD8_14 , 8UD8_24 , 8UD8_15 , 8UD8_25 , 8UD8_16 , 8UD8_26 , 8UD8_17 , 8UD8_27 , 8UD8_1D , 8UD8_2D , 8UD8_18 , 8UD8_28 , 8UD8_19 , 8UD8_29 , 8UD8_1C , 8UD8_2C , 8UD8_1E , 8UD8_2E , 8UD8_1F , 8UD8_2F , 8UD8_1G , 8UD8_2G , 8UD8_1H , 8UD8_2H , 8UD8_1I , 8UD8_2I , 8UD8_1J , 8UD8_2J , 8UD8_1K , 8UD8_2K , 8UD8_1L , 8UD8_2L , 8UD8_1M , 8UD8_2M , 8UD8_1N , 8UD8_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with mrna, a-site q230-n5-methylated release factor 1, and p-site fmeaaakc-peptidyl-trnacys at 2.40a resolution Deposition Author(s): Aleksandrova, E.V. , Basu, R.S. , Gagnon, M.G. , Polikanov, Y.S. , Syroegin, E.A. , Vassilevski, A.A.
Date: 2025-01-12 Method: X-RAY DIFFRACTION Resolution: 2.4 Å Organism(s): Adineta Vaga , Fragaria Ananassa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) Sequences Data: 9MTP_1A , 9MTP_2A , 9MTP_1O , 9MTP_2O , 9MTP_1P , 9MTP_2P , 9MTP_1Q , 9MTP_2Q , 9MTP_1R , 9MTP_2R , 9MTP_1S , 9MTP_2S , 9MTP_1T , 9MTP_2T , 9MTP_1U , 9MTP_2U , 9MTP_1V , 9MTP_2V , 9MTP_1W , 9MTP_2W , 9MTP_1X , 9MTP_2X , 9MTP_1B , 9MTP_2B , 9MTP_1Y , 9MTP_2Y , 9MTP_1Z , 9MTP_2Z , 9MTP_10 , 9MTP_20 , 9MTP_11 , 9MTP_21 , 9MTP_12 , 9MTP_22 , 9MTP_13 , 9MTP_23 , 9MTP_14 , 9MTP_24 , 9MTP_15 , 9MTP_25 , 9MTP_16 , 9MTP_26 , 9MTP_17 , 9MTP_27 , 9MTP_1D , 9MTP_2D , 9MTP_18 , 9MTP_28 , 9MTP_19 , 9MTP_29 , 9MTP_1C , 9MTP_2C , 9MTP_1E , 9MTP_2E , 9MTP_1F , 9MTP_2F , 9MTP_1G , 9MTP_2G , 9MTP_1H , 9MTP_2H , 9MTP_1I , 9MTP_2I , 9MTP_1J , 9MTP_2J , 9MTP_1K , 9MTP_2K , 9MTP_1L , 9MTP_2L , 9MTP_1M , 9MTP_2M , 9MTP_1N , 9MTP_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with mrna, a-site ggd-mutant release factor 1, and p-site fmeaaakc-peptidyl-trnacys at 2.55a resolution Deposition Author(s): Aleksandrova, E.V. , Basu, R.S. , Gagnon, M.G. , Polikanov, Y.S. , Syroegin, E.A. , Vassilevski, A.A.
Date: 2025-01-12 Method: X-RAY DIFFRACTION Resolution: 2.55 Å Organism(s): Adineta Vaga , Fragaria Ananassa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) Sequences Data: 9MTQ_1A , 9MTQ_2A , 9MTQ_1O , 9MTQ_2O , 9MTQ_1P , 9MTQ_2P , 9MTQ_1Q , 9MTQ_2Q , 9MTQ_1R , 9MTQ_2R , 9MTQ_1S , 9MTQ_2S , 9MTQ_1T , 9MTQ_2T , 9MTQ_1U , 9MTQ_2U , 9MTQ_1V , 9MTQ_2V , 9MTQ_1W , 9MTQ_2W , 9MTQ_1X , 9MTQ_2X , 9MTQ_1B , 9MTQ_2B , 9MTQ_1Y , 9MTQ_2Y , 9MTQ_1Z , 9MTQ_2Z , 9MTQ_10 , 9MTQ_20 , 9MTQ_11 , 9MTQ_21 , 9MTQ_12 , 9MTQ_22 , 9MTQ_13 , 9MTQ_23 , 9MTQ_14 , 9MTQ_24 , 9MTQ_15 , 9MTQ_25 , 9MTQ_16 , 9MTQ_26 , 9MTQ_17 , 9MTQ_27 , 9MTQ_1D , 9MTQ_2D , 9MTQ_18 , 9MTQ_28 , 9MTQ_19 , 9MTQ_29 , 9MTQ_1C , 9MTQ_2C , 9MTQ_1E , 9MTQ_2E , 9MTQ_1F , 9MTQ_2F , 9MTQ_1G , 9MTQ_2G , 9MTQ_1H , 9MTQ_2H , 9MTQ_1I , 9MTQ_2I , 9MTQ_1J , 9MTQ_2J , 9MTQ_1K , 9MTQ_2K , 9MTQ_1L , 9MTQ_2L , 9MTQ_1M , 9MTQ_2M , 9MTQ_1N , 9MTQ_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with mrna, a-site ggs-mutant release factor 1, and p-site fmeaaakc-peptidyl-trnacys at 2.80a resolution Deposition Author(s): Aleksandrova, E.V. , Basu, R.S. , Gagnon, M.G. , Polikanov, Y.S. , Syroegin, E.A. , Vassilevski, A.A.
Date: 2025-01-12 Method: X-RAY DIFFRACTION Resolution: 2.8 Å Organism(s): Adineta Vaga , Fragaria Ananassa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) Sequences Data: 9MTR_1A , 9MTR_2A , 9MTR_1O , 9MTR_2O , 9MTR_1P , 9MTR_2P , 9MTR_1Q , 9MTR_2Q , 9MTR_1R , 9MTR_2R , 9MTR_1S , 9MTR_2S , 9MTR_1T , 9MTR_2T , 9MTR_1U , 9MTR_2U , 9MTR_1V , 9MTR_2V , 9MTR_1W , 9MTR_2W , 9MTR_1X , 9MTR_2X , 9MTR_1B , 9MTR_2B , 9MTR_1Y , 9MTR_2Y , 9MTR_1Z , 9MTR_2Z , 9MTR_10 , 9MTR_20 , 9MTR_11 , 9MTR_21 , 9MTR_12 , 9MTR_22 , 9MTR_13 , 9MTR_23 , 9MTR_14 , 9MTR_24 , 9MTR_15 , 9MTR_25 , 9MTR_16 , 9MTR_26 , 9MTR_17 , 9MTR_27 , 9MTR_1D , 9MTR_2D , 9MTR_18 , 9MTR_28 , 9MTR_19 , 9MTR_29 , 9MTR_1C , 9MTR_2C , 9MTR_1E , 9MTR_2E , 9MTR_1F , 9MTR_2F , 9MTR_1G , 9MTR_2G , 9MTR_1H , 9MTR_2H , 9MTR_1I , 9MTR_2I , 9MTR_1J , 9MTR_2J , 9MTR_1K , 9MTR_2K , 9MTR_1L , 9MTR_2L , 9MTR_1M , 9MTR_2M , 9MTR_1N , 9MTR_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with mrna, a-site q230-unmodified release factor 1, and p-site fmeaaakc-peptidyl-trnacys at 2.70a resolution Deposition Author(s): Aleksandrova, E.V. , Basu, R.S. , Gagnon, M.G. , Polikanov, Y.S. , Syroegin, E.A. , Vassilevski, A.A.
Date: 2025-01-12 Method: X-RAY DIFFRACTION Resolution: 2.7 Å Organism(s): Adineta Vaga , Scytalidium Thermophilum , Fragaria Ananassa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) Sequences Data: 9MTS_1A , 9MTS_2A , 9MTS_1O , 9MTS_2O , 9MTS_1P , 9MTS_2P , 9MTS_1Q , 9MTS_2Q , 9MTS_1R , 9MTS_2R , 9MTS_1S , 9MTS_2S , 9MTS_1T , 9MTS_2T , 9MTS_1U , 9MTS_2U , 9MTS_1V , 9MTS_2V , 9MTS_1W , 9MTS_2W , 9MTS_1X , 9MTS_2X , 9MTS_1B , 9MTS_2B , 9MTS_1Y , 9MTS_2Y , 9MTS_1Z , 9MTS_2Z , 9MTS_10 , 9MTS_20 , 9MTS_11 , 9MTS_21 , 9MTS_12 , 9MTS_22 , 9MTS_13 , 9MTS_23 , 9MTS_14 , 9MTS_24 , 9MTS_15 , 9MTS_25 , 9MTS_16 , 9MTS_26 , 9MTS_17 , 9MTS_27 , 9MTS_1D , 9MTS_2D , 9MTS_18 , 9MTS_28 , 9MTS_19 , 9MTS_29 , 9MTS_1C , 9MTS_2C , 9MTS_1E , 9MTS_2E , 9MTS_1F , 9MTS_2F , 9MTS_1G , 9MTS_2G , 9MTS_1H , 9MTS_2H , 9MTS_1I , 9MTS_2I , 9MTS_1J , 9MTS_2J , 9MTS_1K , 9MTS_2K , 9MTS_1L , 9MTS_2L , 9MTS_1M , 9MTS_2M , 9MTS_1N , 9MTS_2N