Search Query :
4V9D
Structures of the bacterial ribosome in classical and hybrid states of trna binding Deposition Author(s): Blanchard, S.C. , Cate, J.H.D. , Chen, V.B. , Dunkle, J.A. , Feldman, M.B. , Kapral, G.J. , Noeske, J. , Pulk, A. , Richardson, J.S. , Wang, L.
Date: 2012-07-31 Method: X-RAY DIFFRACTION Resolution: 3 Å Organism(s): Escherichia Coli , Synthetic Construct Sequences Data: 4V9D_AA , 4V9D_BA , 4V9D_AJ , 4V9D_BJ , 4V9D_AK , 4V9D_BK , 4V9D_AL , 4V9D_BL , 4V9D_AM , 4V9D_BM , 4V9D_AN , 4V9D_BN , 4V9D_AO , 4V9D_BO , 4V9D_AP , 4V9D_BP , 4V9D_AQ , 4V9D_BQ , 4V9D_AR , 4V9D_BR , 4V9D_AS , 4V9D_BS , 4V9D_AB , 4V9D_BB , 4V9D_AT , 4V9D_BT , 4V9D_AU , 4V9D_BU , 4V9D_AV , 4V9D_BV , 4V9D_AX , 4V9D_BX , 4V9D_AY , 4V9D_CA , 4V9D_DA , 4V9D_CB , 4V9D_CC , 4V9D_DC , 4V9D_CD , 4V9D_DD , 4V9D_CE , 4V9D_DE , 4V9D_AC , 4V9D_BC , 4V9D_CF , 4V9D_DF , 4V9D_CG , 4V9D_DG , 4V9D_CH , 4V9D_DH , 4V9D_CI , 4V9D_DI , 4V9D_CJ , 4V9D_DJ , 4V9D_CK , 4V9D_DK , 4V9D_CL , 4V9D_DL , 4V9D_CM , 4V9D_DM , 4V9D_CN , 4V9D_DN , 4V9D_CO , 4V9D_DO , 4V9D_AD , 4V9D_BD , 4V9D_CP , 4V9D_DP , 4V9D_CQ , 4V9D_DQ , 4V9D_CR , 4V9D_DR , 4V9D_CS , 4V9D_DS , 4V9D_CT , 4V9D_DT , 4V9D_CU , 4V9D_DU , 4V9D_CV , 4V9D_DV , 4V9D_CW , 4V9D_CX , 4V9D_DX , 4V9D_CY , 4V9D_DY , 4V9D_AE , 4V9D_BE , 4V9D_CZ , 4V9D_DZ , 4V9D_C0 , 4V9D_D0 , 4V9D_C1 , 4V9D_D1 , 4V9D_C2 , 4V9D_D2 , 4V9D_C3 , 4V9D_D3 , 4V9D_C4 , 4V9D_D4 , 4V9D_DB , 4V9D_DW , 4V9D_AF , 4V9D_BF , 4V9D_AG , 4V9D_BG , 4V9D_AH , 4V9D_BH , 4V9D_AI , 4V9D_BI
4W4G
Postcleavage state of 70s bound to higb toxin and aaa (lysine) codon Deposition Author(s): Dunham, C.M. , Dunkle, J.A. , Maehigashi, T. , Schureck, M.A.
Date: 2014-08-14 Method: X-RAY DIFFRACTION Resolution: 3.3 Å Organism(s): Escherichia Coli Str. K-12 Substr. Mc4100 , Proteus Vulgaris , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 4W4G_QA , 4W4G_XA , 4W4G_QJ , 4W4G_XJ , 4W4G_QK , 4W4G_XK , 4W4G_QL , 4W4G_XL , 4W4G_QM , 4W4G_XM , 4W4G_QN , 4W4G_XN , 4W4G_QO , 4W4G_XO , 4W4G_QP , 4W4G_XP , 4W4G_QQ , 4W4G_XQ , 4W4G_QR , 4W4G_XR , 4W4G_QS , 4W4G_XS , 4W4G_QB , 4W4G_XB , 4W4G_QT , 4W4G_XT , 4W4G_QU , 4W4G_XU , 4W4G_QV , 4W4G_QW , 4W4G_XV , 4W4G_XW , 4W4G_QX , 4W4G_XX , 4W4G_QY , 4W4G_XY , 4W4G_RA , 4W4G_YA , 4W4G_RB , 4W4G_YB , 4W4G_RD , 4W4G_YD , 4W4G_RE , 4W4G_YE , 4W4G_RF , 4W4G_YF , 4W4G_QC , 4W4G_XC , 4W4G_RG , 4W4G_YG , 4W4G_RH , 4W4G_YH , 4W4G_RI , 4W4G_YI , 4W4G_RN , 4W4G_YN , 4W4G_RO , 4W4G_YO , 4W4G_RP , 4W4G_YP , 4W4G_RQ , 4W4G_YQ , 4W4G_RR , 4W4G_YR , 4W4G_RS , 4W4G_YS , 4W4G_RT , 4W4G_YT , 4W4G_QD , 4W4G_XD , 4W4G_RU , 4W4G_YU , 4W4G_RV , 4W4G_YV , 4W4G_RW , 4W4G_YW , 4W4G_RX , 4W4G_YX , 4W4G_RY , 4W4G_YY , 4W4G_RZ , 4W4G_YZ , 4W4G_R0 , 4W4G_Y0 , 4W4G_R1 , 4W4G_Y1 , 4W4G_R2 , 4W4G_Y2 , 4W4G_R3 , 4W4G_Y3 , 4W4G_QE , 4W4G_XE , 4W4G_R4 , 4W4G_Y4 , 4W4G_R5 , 4W4G_Y5 , 4W4G_R6 , 4W4G_Y6 , 4W4G_R7 , 4W4G_Y7 , 4W4G_R8 , 4W4G_Y8 , 4W4G_R9 , 4W4G_Y9 , 4W4G_QF , 4W4G_XF , 4W4G_QG , 4W4G_XG , 4W4G_QH , 4W4G_XH , 4W4G_QI , 4W4G_XI
4WWW
Crystal structure of the e. coli ribosome bound to cem-101 Deposition Author(s): Cate, J.H.D. , Dunkle, J.A. , Mankin, A.S. , Zhang, W.
Date: 2014-11-12 Method: X-RAY DIFFRACTION Resolution: 3.1 Å Organism(s): Escherichia Coli , Escherichia Coli Str. K-12 Substr. Mg1655 Sequences Data: 4WWW_RA , 4WWW_YA , 4WWW_RJ , 4WWW_YJ , 4WWW_RK , 4WWW_YK , 4WWW_RL , 4WWW_YL , 4WWW_RM , 4WWW_YM , 4WWW_RN , 4WWW_YN , 4WWW_RO , 4WWW_YO , 4WWW_RP , 4WWW_YP , 4WWW_RQ , 4WWW_YQ , 4WWW_RR , 4WWW_YR , 4WWW_RS , 4WWW_YS , 4WWW_RB , 4WWW_YB , 4WWW_RT , 4WWW_YT , 4WWW_RU , 4WWW_YU , 4WWW_RV , 4WWW_YV , 4WWW_RW , 4WWW_YW , 4WWW_RX , 4WWW_YX , 4WWW_RY , 4WWW_YY , 4WWW_RZ , 4WWW_YZ , 4WWW_R0 , 4WWW_Y0 , 4WWW_R1 , 4WWW_Y1 , 4WWW_R2 , 4WWW_Y2 , 4WWW_RC , 4WWW_YC , 4WWW_R3 , 4WWW_Y3 , 4WWW_R4 , 4WWW_Y4 , 4WWW_QA , 4WWW_XA , 4WWW_QB , 4WWW_XB , 4WWW_QC , 4WWW_XC , 4WWW_QD , 4WWW_XD , 4WWW_QE , 4WWW_XE , 4WWW_QF , 4WWW_XF , 4WWW_QG , 4WWW_XG , 4WWW_QH , 4WWW_XH , 4WWW_RD , 4WWW_YD , 4WWW_QI , 4WWW_XI , 4WWW_QJ , 4WWW_XJ , 4WWW_QK , 4WWW_XK , 4WWW_QL , 4WWW_XL , 4WWW_QM , 4WWW_XM , 4WWW_QN , 4WWW_XN , 4WWW_QO , 4WWW_XO , 4WWW_QP , 4WWW_XP , 4WWW_QQ , 4WWW_XQ , 4WWW_QR , 4WWW_XR , 4WWW_RE , 4WWW_YE , 4WWW_QS , 4WWW_XS , 4WWW_QT , 4WWW_XT , 4WWW_QU , 4WWW_XU , 4WWW_RF , 4WWW_YF , 4WWW_RG , 4WWW_YG , 4WWW_RH , 4WWW_YH , 4WWW_RI , 4WWW_YI
4YPB
Precleavage 70s structure of the p. vulgaris higb deltah92 toxin bound to the aaa codon Deposition Author(s): Dunham, C.M. , Dunkle, J.A. , Maehigashi, T. , Schureck, M.A.
Date: 2015-03-12 Method: X-RAY DIFFRACTION Resolution: 3.4 Å Organism(s): Escherichia Coli , Proteus Vulgaris , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Synthetic Construct Sequences Data: 4YPB_QA , 4YPB_XA , 4YPB_QJ , 4YPB_XJ , 4YPB_QK , 4YPB_XK , 4YPB_QL , 4YPB_XL , 4YPB_QM , 4YPB_XM , 4YPB_QN , 4YPB_XN , 4YPB_QO , 4YPB_XO , 4YPB_QP , 4YPB_XP , 4YPB_QQ , 4YPB_XQ , 4YPB_QR , 4YPB_XR , 4YPB_QS , 4YPB_XS , 4YPB_QB , 4YPB_XB , 4YPB_QT , 4YPB_XT , 4YPB_QU , 4YPB_XU , 4YPB_QV , 4YPB_QW , 4YPB_XV , 4YPB_XW , 4YPB_QX , 4YPB_XX , 4YPB_QY , 4YPB_XY , 4YPB_RA , 4YPB_YA , 4YPB_RB , 4YPB_YB , 4YPB_RD , 4YPB_YD , 4YPB_RE , 4YPB_YE , 4YPB_RF , 4YPB_YF , 4YPB_QC , 4YPB_XC , 4YPB_RG , 4YPB_YG , 4YPB_RH , 4YPB_YH , 4YPB_RI , 4YPB_YI , 4YPB_RN , 4YPB_YN , 4YPB_RO , 4YPB_YO , 4YPB_RP , 4YPB_YP , 4YPB_RQ , 4YPB_YQ , 4YPB_RR , 4YPB_YR , 4YPB_RS , 4YPB_YS , 4YPB_RT , 4YPB_YT , 4YPB_QD , 4YPB_XD , 4YPB_RU , 4YPB_YU , 4YPB_RV , 4YPB_YV , 4YPB_RW , 4YPB_YW , 4YPB_RX , 4YPB_YX , 4YPB_RY , 4YPB_YY , 4YPB_RZ , 4YPB_YZ , 4YPB_R0 , 4YPB_Y0 , 4YPB_R1 , 4YPB_Y1 , 4YPB_R2 , 4YPB_Y2 , 4YPB_R3 , 4YPB_Y3 , 4YPB_QE , 4YPB_XE , 4YPB_R4 , 4YPB_Y4 , 4YPB_R5 , 4YPB_Y5 , 4YPB_R6 , 4YPB_Y6 , 4YPB_R7 , 4YPB_Y7 , 4YPB_R8 , 4YPB_Y8 , 4YPB_R9 , 4YPB_Y9 , 4YPB_QF , 4YPB_XF , 4YPB_QG , 4YPB_XG , 4YPB_QH , 4YPB_XH , 4YPB_QI , 4YPB_XI
4YZV
Precleavage 70s structure of the p. vulgaris higb deltah92 toxin bound to the aca codon Deposition Author(s): Dunham, C.M. , Dunkle, J.A. , Maehigashi, T. , Schureck, M.A.
Date: 2015-03-25 Method: X-RAY DIFFRACTION Resolution: 3.1 Å Organism(s): Escherichia Coli , Proteus Vulgaris , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 4YZV_QA , 4YZV_XA , 4YZV_QJ , 4YZV_XJ , 4YZV_QK , 4YZV_XK , 4YZV_QL , 4YZV_XL , 4YZV_QM , 4YZV_XM , 4YZV_QN , 4YZV_XN , 4YZV_QO , 4YZV_XO , 4YZV_QP , 4YZV_XP , 4YZV_QQ , 4YZV_XQ , 4YZV_QR , 4YZV_XR , 4YZV_QS , 4YZV_XS , 4YZV_QB , 4YZV_XB , 4YZV_QT , 4YZV_XT , 4YZV_QU , 4YZV_XU , 4YZV_QV , 4YZV_XV , 4YZV_QX , 4YZV_XX , 4YZV_QY , 4YZV_XY , 4YZV_RA , 4YZV_YA , 4YZV_RB , 4YZV_YB , 4YZV_RD , 4YZV_YD , 4YZV_RE , 4YZV_YE , 4YZV_RF , 4YZV_YF , 4YZV_QC , 4YZV_XC , 4YZV_RG , 4YZV_YG , 4YZV_RH , 4YZV_YH , 4YZV_RI , 4YZV_YI , 4YZV_RN , 4YZV_YN , 4YZV_RO , 4YZV_YO , 4YZV_RP , 4YZV_YP , 4YZV_RQ , 4YZV_YQ , 4YZV_RR , 4YZV_YR , 4YZV_RS , 4YZV_YS , 4YZV_RT , 4YZV_YT , 4YZV_QD , 4YZV_XD , 4YZV_RU , 4YZV_YU , 4YZV_RV , 4YZV_YV , 4YZV_RW , 4YZV_YW , 4YZV_RX , 4YZV_YX , 4YZV_RY , 4YZV_YY , 4YZV_RZ , 4YZV_YZ , 4YZV_R0 , 4YZV_Y0 , 4YZV_R1 , 4YZV_Y1 , 4YZV_R2 , 4YZV_Y2 , 4YZV_R3 , 4YZV_Y3 , 4YZV_QE , 4YZV_XE , 4YZV_R4 , 4YZV_Y4 , 4YZV_R5 , 4YZV_Y5 , 4YZV_R6 , 4YZV_Y6 , 4YZV_R7 , 4YZV_Y7 , 4YZV_R8 , 4YZV_Y8 , 4YZV_R9 , 4YZV_Y9 , 4YZV_Z6 , 4YZV_Z7 , 4YZV_QF , 4YZV_XF , 4YZV_QG , 4YZV_XG , 4YZV_QH , 4YZV_XH , 4YZV_QI , 4YZV_XI
5VPO
The 70s p-site asl sufa6 complex Deposition Author(s): Dunham, C.M. , Dunkle, J.A. , Hong, S. , Maehigashi, T. , Sunita, S.
Date: 2017-05-05 Method: X-RAY DIFFRACTION Resolution: 3.34 Å Organism(s): Escherichia Coli , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Synthetic Construct Sequences Data: 5VPO_QX , 5VPO_XX , 5VPO_QI , 5VPO_XI , 5VPO_QJ , 5VPO_XJ , 5VPO_QK , 5VPO_XK , 5VPO_QL , 5VPO_XL , 5VPO_QM , 5VPO_XM , 5VPO_QN , 5VPO_XN , 5VPO_QO , 5VPO_XO , 5VPO_QP , 5VPO_XP , 5VPO_QQ , 5VPO_XQ , 5VPO_QR , 5VPO_XR , 5VPO_QA , 5VPO_XA , 5VPO_QS , 5VPO_XS , 5VPO_QT , 5VPO_XT , 5VPO_QU , 5VPO_XU , 5VPO_RA , 5VPO_YA , 5VPO_RB , 5VPO_YB , 5VPO_RD , 5VPO_YD , 5VPO_RE , 5VPO_YE , 5VPO_RF , 5VPO_YF , 5VPO_RG , 5VPO_YG , 5VPO_RH , 5VPO_YH , 5VPO_QB , 5VPO_XB , 5VPO_RI , 5VPO_YI , 5VPO_RN , 5VPO_YN , 5VPO_RO , 5VPO_YO , 5VPO_RP , 5VPO_YP , 5VPO_RQ , 5VPO_YQ , 5VPO_RR , 5VPO_YR , 5VPO_RS , 5VPO_YS , 5VPO_RT , 5VPO_YT , 5VPO_RU , 5VPO_YU , 5VPO_RV , 5VPO_YV , 5VPO_QC , 5VPO_XC , 5VPO_RW , 5VPO_YW , 5VPO_RX , 5VPO_YX , 5VPO_RY , 5VPO_YY , 5VPO_RZ , 5VPO_YZ , 5VPO_R0 , 5VPO_Y0 , 5VPO_R1 , 5VPO_Y1 , 5VPO_R2 , 5VPO_Y2 , 5VPO_R3 , 5VPO_Y3 , 5VPO_R4 , 5VPO_Y4 , 5VPO_R5 , 5VPO_Y5 , 5VPO_QD , 5VPO_XD , 5VPO_R6 , 5VPO_Y6 , 5VPO_R7 , 5VPO_Y7 , 5VPO_R8 , 5VPO_Y8 , 5VPO_R9 , 5VPO_Y9 , 5VPO_XV , 5VPO_QV , 5VPO_QE , 5VPO_XE , 5VPO_QF , 5VPO_XF , 5VPO_QG , 5VPO_XG , 5VPO_QH , 5VPO_XH
5VPP
The 70s p-site trna sufa6 complex Deposition Author(s): Dunham, C.M. , Dunkle, J.A. , Hong, S. , Maehigashi, T. , Sunita, S.
Date: 2017-05-05 Method: X-RAY DIFFRACTION Resolution: 3.9 Å Organism(s): Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Synthetic Construct Sequences Data: 5VPP_RA , 5VPP_YA , 5VPP_RO , 5VPP_YO , 5VPP_RP , 5VPP_YP , 5VPP_RQ , 5VPP_YQ , 5VPP_RR , 5VPP_YR , 5VPP_RS , 5VPP_YS , 5VPP_RT , 5VPP_YT , 5VPP_RU , 5VPP_YU , 5VPP_RV , 5VPP_YV , 5VPP_RW , 5VPP_YW , 5VPP_RX , 5VPP_YX , 5VPP_RB , 5VPP_YB , 5VPP_RY , 5VPP_YY , 5VPP_RZ , 5VPP_YZ , 5VPP_R0 , 5VPP_Y0 , 5VPP_R1 , 5VPP_Y1 , 5VPP_R2 , 5VPP_Y2 , 5VPP_R3 , 5VPP_Y3 , 5VPP_R5 , 5VPP_Y5 , 5VPP_R6 , 5VPP_Y6 , 5VPP_R7 , 5VPP_Y7 , 5VPP_R8 , 5VPP_Y8 , 5VPP_RD , 5VPP_YD , 5VPP_R9 , 5VPP_Y9 , 5VPP_QB , 5VPP_XB , 5VPP_QC , 5VPP_XC , 5VPP_QD , 5VPP_XD , 5VPP_QE , 5VPP_XE , 5VPP_QF , 5VPP_XF , 5VPP_QG , 5VPP_XG , 5VPP_QH , 5VPP_XH , 5VPP_QI , 5VPP_XI , 5VPP_QJ , 5VPP_XJ , 5VPP_RE , 5VPP_YE , 5VPP_QK , 5VPP_XK , 5VPP_QL , 5VPP_XL , 5VPP_QM , 5VPP_XM , 5VPP_QN , 5VPP_XN , 5VPP_QO , 5VPP_XO , 5VPP_QP , 5VPP_XP , 5VPP_QQ , 5VPP_XQ , 5VPP_QR , 5VPP_XR , 5VPP_QT , 5VPP_XT , 5VPP_QA , 5VPP_XA , 5VPP_RF , 5VPP_YF , 5VPP_XS , 5VPP_QS , 5VPP_R4 , 5VPP_Y4 , 5VPP_XX , 5VPP_QX , 5VPP_XV , 5VPP_QV , 5VPP_RG , 5VPP_YG , 5VPP_RH , 5VPP_YH , 5VPP_RI , 5VPP_YI , 5VPP_RN , 5VPP_YN
6MR2
E. coli cysteine desulfurase sufs with a cysteine persulfide intermediate Deposition Author(s): Dunkle, J.A. , Frantom, P.A.
Date: 2018-10-11 Method: X-RAY DIFFRACTION Resolution: 2.404 Å Organism(s): Escherichia Coli (Strain K12) Sequences Data: 6MR2_A
6MR6
E. coli cysteine desulfurase sufs h55a with a cysteine persulfide intermediate Deposition Author(s): Dunkle, J.A. , Frantom, P.A.
Date: 2018-10-11 Method: X-RAY DIFFRACTION Resolution: 2.019 Å Organism(s): Escherichia Coli (Strain K12) Sequences Data: 6MR6_A
6MRE
E. coli cysteine desulfurase sufs r92a with a cysteine persulfide intermediate Deposition Author(s): Dunkle, J.A. , Frantom, P.A.
Date: 2018-10-12 Method: X-RAY DIFFRACTION Resolution: 2.5 Å Organism(s): Escherichia Coli (Strain K12) Sequences Data: 6MRE_A