Structural basis of human parechovirus neutralization by human monoclonal antibodies Deposition Author(s): Bakker, A.Q. , Beaumont, T. , Butcher, S.J. , Claassen, Y. , Koen, G. , Ora, A. , Shakeel, S. , Westerhuis, B.M. , Wolthers, K.C.
Date: 2014-12-10 Method: ELECTRON MICROSCOPY Resolution: 20.0 Å Organism(s): Homo Sapiens , Human Parechovirus 1 (Strain Harris) Sequences Data: 4UDF_1A , 4UDF_1E , 4UDF_1I , 4UDF_1M , 4UDF_1Q , 4UDF_1U , 4UDF_1Y , 4UDF_12 , 4UDF_16 , 4UDF_2A , 4UDF_2E , 4UDF_2I , 4UDF_2M , 4UDF_2Q , 4UDF_2U , 4UDF_2Y , 4UDF_22 , 4UDF_26 , 4UDF_3A , 4UDF_3E , 4UDF_3I , 4UDF_3M , 4UDF_3Q , 4UDF_3U , 4UDF_3Y , 4UDF_32 , 4UDF_36 , 4UDF_4A , 4UDF_4E , 4UDF_4I , 4UDF_4M , 4UDF_4Q , 4UDF_4U , 4UDF_4Y , 4UDF_42 , 4UDF_46 , 4UDF_5A , 4UDF_5E , 4UDF_5I , 4UDF_5M , 4UDF_5Q , 4UDF_5U , 4UDF_5Y , 4UDF_52 , 4UDF_56 , 4UDF_6A , 4UDF_6E , 4UDF_6I , 4UDF_6M , 4UDF_6Q , 4UDF_6U , 4UDF_6Y , 4UDF_62 , 4UDF_66 , 4UDF_7A , 4UDF_7E , 4UDF_7I , 4UDF_7M , 4UDF_7Q , 4UDF_7U , 4UDF_1B , 4UDF_1F , 4UDF_1J , 4UDF_1N , 4UDF_1R , 4UDF_1V , 4UDF_1Z , 4UDF_13 , 4UDF_17 , 4UDF_2B , 4UDF_2F , 4UDF_2J , 4UDF_2N , 4UDF_2R , 4UDF_2V , 4UDF_2Z , 4UDF_23 , 4UDF_27 , 4UDF_3B , 4UDF_3F , 4UDF_3J , 4UDF_3N , 4UDF_3R , 4UDF_3V , 4UDF_3Z , 4UDF_33 , 4UDF_37 , 4UDF_4B , 4UDF_4F , 4UDF_4J , 4UDF_4N , 4UDF_4R , 4UDF_4V , 4UDF_4Z , 4UDF_43 , 4UDF_47 , 4UDF_5B , 4UDF_5F , 4UDF_5J , 4UDF_5N , 4UDF_5R , 4UDF_5V , 4UDF_5Z , 4UDF_53 , 4UDF_57 , 4UDF_6B , 4UDF_6F , 4UDF_6J , 4UDF_6N , 4UDF_6R , 4UDF_6V , 4UDF_6Z , 4UDF_63 , 4UDF_67 , 4UDF_7B , 4UDF_7F , 4UDF_7J , 4UDF_7N , 4UDF_7R , 4UDF_7V , 4UDF_1C , 4UDF_1G , 4UDF_1K , 4UDF_1O , 4UDF_1S , 4UDF_1W , 4UDF_10 , 4UDF_14 , 4UDF_18 , 4UDF_2C , 4UDF_2G , 4UDF_2K , 4UDF_2O , 4UDF_2S , 4UDF_2W , 4UDF_20 , 4UDF_24 , 4UDF_28 , 4UDF_3C , 4UDF_3G , 4UDF_3K , 4UDF_3O , 4UDF_3S , 4UDF_3W , 4UDF_30 , 4UDF_34 , 4UDF_38 , 4UDF_4C , 4UDF_4G , 4UDF_4K , 4UDF_4O , 4UDF_4S , 4UDF_4W , 4UDF_40 , 4UDF_44 , 4UDF_48 , 4UDF_5C , 4UDF_5G , 4UDF_5K , 4UDF_5O , 4UDF_5S , 4UDF_5W , 4UDF_50 , 4UDF_54 , 4UDF_58 , 4UDF_6C , 4UDF_6G , 4UDF_6K , 4UDF_6O , 4UDF_6S , 4UDF_6W , 4UDF_60 , 4UDF_64 , 4UDF_68 , 4UDF_7C , 4UDF_7G , 4UDF_7K , 4UDF_7O , 4UDF_7S , 4UDF_7W , 4UDF_1D , 4UDF_1H , 4UDF_1L , 4UDF_1P , 4UDF_1T , 4UDF_1X , 4UDF_11 , 4UDF_15 , 4UDF_19 , 4UDF_2D , 4UDF_2H , 4UDF_2L , 4UDF_2P , 4UDF_2T , 4UDF_2X , 4UDF_21 , 4UDF_25 , 4UDF_29 , 4UDF_3D , 4UDF_3H , 4UDF_3L , 4UDF_3P , 4UDF_3T , 4UDF_3X , 4UDF_31 , 4UDF_35 , 4UDF_39 , 4UDF_4D , 4UDF_4H , 4UDF_4L , 4UDF_4P , 4UDF_4T , 4UDF_4X , 4UDF_41 , 4UDF_45 , 4UDF_49 , 4UDF_5D , 4UDF_5H , 4UDF_5L , 4UDF_5P , 4UDF_5T , 4UDF_5X , 4UDF_51 , 4UDF_55 , 4UDF_59 , 4UDF_6D , 4UDF_6H , 4UDF_6L , 4UDF_6P , 4UDF_6T , 4UDF_6X , 4UDF_61 , 4UDF_65 , 4UDF_69 , 4UDF_7D , 4UDF_7H , 4UDF_7L , 4UDF_7P , 4UDF_7T , 4UDF_7X
Multiple capsid-stabilizing protein-rna and protein-protein interactions revealed in a high-resolution structure of an emerging picornavirus causing neonatal sepsis Deposition Author(s): Bakker, A.Q. , Beaumont, T. , Butcher, S.J. , Domanska, A. , Koning, R.I. , Koster, A.J. , Matadeen, R. , Shakeel, S. , Westerhuis, B.M. , Wolthers, K.C.
Date: 2015-09-17 Method: ELECTRON MICROSCOPY Resolution: 4.3 Å Organism(s): Human Parechovirus 3 Sequences Data: 5APM_A , 5APM_B , 5APM_C
Crystal structure of measles n0-p complex Deposition Author(s): Butcher, S.J. , Guryanov, S.G. , Kajander, T. , Kasaragod, P. , Liljeroos, L.
Date: 2015-10-07 Method: X-RAY DIFFRACTION Resolution: 2.71 Å Organism(s): Measles Virus (Strain Edmonston B) , Measles Virus (Strain Edmonston-Moraten Vaccine) Sequences Data: 5E4V_A
Rebuild and re-refined model for human parechovirus 1 Deposition Author(s): Butcher, S.J. , Cockburn, J.J.B. , Dykeman, E.C. , Ora, A. , Shakeel, S. , Stockley, P.G. , Twarock, R. , White, S.J.
Date: 2016-12-01 Method: X-RAY DIFFRACTION Resolution: 3.09 Å Organism(s): Echovirus 22 (Strain Harris) , Human Parechovirus 1 (Strain Harris) Sequences Data: 5MJV_A , 5MJV_B , 5MJV_C , 5MJV_D
Nora virus structure Deposition Author(s): Butcher, S.J. , Ekstrom, J.-O. , Laurinmaki, P. , Shakeel, S.
Date: 2016-12-08 Method: ELECTRON MICROSCOPY Resolution: 2.7 Å Organism(s): Nora Virus Sequences Data: 5MM2_A , 5MM2_B , 5MM2_C
High-resolution cryo-em of fab-labeled human parechovirus 3 Deposition Author(s): Butcher, S.J. , Domanska, A. , Flatt, J.W. , Geraets, J.A. , Jukonen, J.J.J.
Date: 2018-06-20 Method: ELECTRON MICROSCOPY Resolution: 2.8 Å Organism(s): Homo Sapiens , Human Parechovirus 3 Sequences Data: 6GV4_D , 6GV4_A , 6GV4_B , 6GV4_C , 6GV4_H , 6GV4_L
Identification of a druggable vp1-vp3 interprotomer pocket in the capsid of enteroviruses Deposition Author(s): Butcher, S.J. , Domanska, A. , Flatt, J.W. , Geraets, J.A.
Date: 2018-07-05 Method: ELECTRON MICROSCOPY Resolution: 4.0 Å Organism(s): Coxsackievirus B3 (Strain Nancy) Sequences Data: 6GZV_A , 6GZV_B , 6GZV_C , 6GZV_D
Extracellular factors prime enterovirus particles for uncoating Deposition Author(s): Butcher, S.J. , Domanska, A. , Laajala, M. , Marjomaki, V.S. , Pelliccia, M. , Ruokolainen, V.
Date: 2019-02-15 Method: ELECTRON MICROSCOPY Resolution: 3.6 Å Organism(s): Echovirus E1 Sequences Data: 6O06_A , 6O06_B , 6O06_C
Echovirus 1 intact particle Deposition Author(s): Butcher, S.J. , Domanska, A. , Laajala, M.A. , Marjomaki, V.S. , Pelliccia, M. , Ruokolainen, V.P.
Date: 2019-04-26 Method: ELECTRON MICROSCOPY Resolution: 3.5 Å Organism(s): Echovirus E1 Sequences Data: 6RJF_1 , 6RJF_2 , 6RJF_3 , 6RJF_4
Coxsackievirus b4 in complex with capsid binder compound 48 Deposition Author(s): Butcher, S.J. , Domanska, A. , Flatt, J.W.
Date: 2020-06-11 Method: ELECTRON MICROSCOPY Resolution: 2.7 Å Organism(s): Coxsackievirus B4 (Strain E2) Sequences Data: 6ZCK_A , 6ZCK_B , 6ZCK_C , 6ZCK_D