Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with macrolone mcx-128 and protein y at 2.35a resolution Deposition Author(s): Aleksandrova, E.V. , Alizadeh, F. , Klepacki, D. , Liang, J.-H. , Ma, C.-X. , Mankin, A.S. , Polikanov, Y.S. , Vazquez-Laslop, N.
Date: 2024-01-27 Method: X-RAY DIFFRACTION Resolution: 2.35 Å Organism(s): Sphingobium Sp. (Strain Nbrc 103272 / Syk-6) , Fragaria Ananassa Sequences Data: 8VTW_1A , 8VTW_2A , 8VTW_1O , 8VTW_2O , 8VTW_1P , 8VTW_2P , 8VTW_1Q , 8VTW_2Q , 8VTW_1R , 8VTW_2R , 8VTW_1S , 8VTW_2S , 8VTW_1T , 8VTW_2T , 8VTW_1U , 8VTW_2U , 8VTW_1V , 8VTW_2V , 8VTW_1W , 8VTW_2W , 8VTW_1X , 8VTW_2X , 8VTW_1B , 8VTW_2B , 8VTW_1Y , 8VTW_2Y , 8VTW_1Z , 8VTW_2Z , 8VTW_10 , 8VTW_20 , 8VTW_11 , 8VTW_21 , 8VTW_12 , 8VTW_22 , 8VTW_13 , 8VTW_23 , 8VTW_14 , 8VTW_24 , 8VTW_15 , 8VTW_25 , 8VTW_16 , 8VTW_26 , 8VTW_17 , 8VTW_27 , 8VTW_1D , 8VTW_2D , 8VTW_18 , 8VTW_28 , 8VTW_19 , 8VTW_29 , 8VTW_1C , 8VTW_2C , 8VTW_1E , 8VTW_2E , 8VTW_1F , 8VTW_2F , 8VTW_1G , 8VTW_2G , 8VTW_1H , 8VTW_2H , 8VTW_1I , 8VTW_2I , 8VTW_1J , 8VTW_2J , 8VTW_1K , 8VTW_2K , 8VTW_1L , 8VTW_2L , 8VTW_1M , 8VTW_2M , 8VTW_1N , 8VTW_2N
Crystal structure of the a2058-n6-dimethylated thermus thermophilus 70s ribosome in complex with macrolone mcx-128, mrna, aminoacylated a-site phe-trnaphe, aminoacylated p-site fmet-trnamet, and deacylated e-site trnaphe at 2.40a resolution Deposition Author(s): Aleksandrova, E.V. , Alizadeh, F. , Klepacki, D. , Liang, J.-H. , Ma, C.-X. , Mankin, A.S. , Polikanov, Y.S. , Vazquez-Laslop, N.
Date: 2024-01-27 Method: X-RAY DIFFRACTION Resolution: 2.4 Å Organism(s): Adineta Vaga , Fragaria Ananassa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) Sequences Data: 8VTX_1A , 8VTX_2A , 8VTX_1O , 8VTX_2O , 8VTX_1P , 8VTX_2P , 8VTX_1Q , 8VTX_2Q , 8VTX_1R , 8VTX_2R , 8VTX_1S , 8VTX_2S , 8VTX_1T , 8VTX_2T , 8VTX_1U , 8VTX_2U , 8VTX_1V , 8VTX_2V , 8VTX_1W , 8VTX_2W , 8VTX_1X , 8VTX_2X , 8VTX_1B , 8VTX_2B , 8VTX_1Y , 8VTX_2Y , 8VTX_1Z , 8VTX_2Z , 8VTX_10 , 8VTX_20 , 8VTX_11 , 8VTX_21 , 8VTX_12 , 8VTX_22 , 8VTX_13 , 8VTX_23 , 8VTX_14 , 8VTX_24 , 8VTX_15 , 8VTX_25 , 8VTX_16 , 8VTX_26 , 8VTX_17 , 8VTX_27 , 8VTX_1D , 8VTX_2D , 8VTX_18 , 8VTX_28 , 8VTX_19 , 8VTX_29 , 8VTX_1C , 8VTX_2C , 8VTX_1E , 8VTX_2E , 8VTX_1F , 8VTX_2F , 8VTX_1G , 8VTX_2G , 8VTX_1H , 8VTX_2H , 8VTX_1I , 8VTX_2I , 8VTX_1J , 8VTX_2J , 8VTX_1K , 8VTX_2K , 8VTX_1L , 8VTX_2L , 8VTX_1M , 8VTX_2M , 8VTX_1N , 8VTX_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with ciprofloxacin and protein y at 2.60a resolution Deposition Author(s): Aleksandrova, E.V. , Alizadeh, F. , Klepacki, D. , Liang, J.-H. , Ma, C.-X. , Mankin, A.S. , Polikanov, Y.S. , Vazquez-Laslop, N.
Date: 2024-01-27 Method: X-RAY DIFFRACTION Resolution: 2.6 Å Organism(s): Sphingobium Sp. (Strain Nbrc 103272 / Syk-6) , Fragaria Ananassa Sequences Data: 8VTY_1A , 8VTY_2A , 8VTY_1O , 8VTY_2O , 8VTY_1P , 8VTY_2P , 8VTY_1Q , 8VTY_2Q , 8VTY_1R , 8VTY_2R , 8VTY_1S , 8VTY_2S , 8VTY_1T , 8VTY_2T , 8VTY_1U , 8VTY_2U , 8VTY_1V , 8VTY_2V , 8VTY_1W , 8VTY_2W , 8VTY_1X , 8VTY_2X , 8VTY_1B , 8VTY_2B , 8VTY_1Y , 8VTY_2Y , 8VTY_1Z , 8VTY_2Z , 8VTY_10 , 8VTY_20 , 8VTY_11 , 8VTY_21 , 8VTY_12 , 8VTY_22 , 8VTY_13 , 8VTY_23 , 8VTY_14 , 8VTY_24 , 8VTY_15 , 8VTY_25 , 8VTY_16 , 8VTY_26 , 8VTY_17 , 8VTY_27 , 8VTY_1D , 8VTY_2D , 8VTY_18 , 8VTY_28 , 8VTY_19 , 8VTY_29 , 8VTY_1C , 8VTY_2C , 8VTY_1E , 8VTY_2E , 8VTY_1F , 8VTY_2F , 8VTY_1G , 8VTY_2G , 8VTY_1H , 8VTY_2H , 8VTY_1I , 8VTY_2I , 8VTY_1J , 8VTY_2J , 8VTY_1K , 8VTY_2K , 8VTY_1L , 8VTY_2L , 8VTY_1M , 8VTY_2M , 8VTY_1N , 8VTY_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with o-cresomycin, mrna, deacylated a-site trnaphe, aminoacylated p-site fmet-trnamet, and deacylated e-site trnaphe at 2.50a resolution Deposition Author(s): Aleksandrova, E.V. , Benedetto, A.E. , Dunand, C.F. , Jiang, T. , Lee, J. , Myers, A.G. , Polikanov, Y.S. , Ramkissoon, A. , Robinson, P.J. , See, D.N.Y. , Svetlov, M.S. , Tresco, B.I.C. , Wu, K.J.Y. , Yu, M.
Date: 2024-08-07 Method: X-RAY DIFFRACTION Resolution: 2.5 Å Organism(s): Adineta Vaga , Fragaria Ananassa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) Sequences Data: 9D0G_1A , 9D0G_2A , 9D0G_1O , 9D0G_2O , 9D0G_1P , 9D0G_2P , 9D0G_1Q , 9D0G_2Q , 9D0G_1R , 9D0G_2R , 9D0G_1S , 9D0G_2S , 9D0G_1T , 9D0G_2T , 9D0G_1U , 9D0G_2U , 9D0G_1V , 9D0G_2V , 9D0G_1W , 9D0G_2W , 9D0G_1X , 9D0G_2X , 9D0G_1B , 9D0G_2B , 9D0G_1Y , 9D0G_2Y , 9D0G_1Z , 9D0G_2Z , 9D0G_10 , 9D0G_20 , 9D0G_11 , 9D0G_21 , 9D0G_12 , 9D0G_22 , 9D0G_13 , 9D0G_23 , 9D0G_14 , 9D0G_24 , 9D0G_15 , 9D0G_25 , 9D0G_16 , 9D0G_26 , 9D0G_17 , 9D0G_27 , 9D0G_1D , 9D0G_2D , 9D0G_18 , 9D0G_28 , 9D0G_19 , 9D0G_29 , 9D0G_1C , 9D0G_2C , 9D0G_1E , 9D0G_2E , 9D0G_1F , 9D0G_2F , 9D0G_1G , 9D0G_2G , 9D0G_1H , 9D0G_2H , 9D0G_1I , 9D0G_2I , 9D0G_1J , 9D0G_2J , 9D0G_1K , 9D0G_2K , 9D0G_1L , 9D0G_2L , 9D0G_1M , 9D0G_2M , 9D0G_1N , 9D0G_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with c-cresomycin, mrna, deacylated a-site trnaphe, aminoacylated p-site fmet-trnamet, and deacylated e-site trnaphe at 2.50a resolution Deposition Author(s): Aleksandrova, E.V. , Benedetto, A.E. , Dunand, C.F. , Jiang, T. , Lee, J. , Myers, A.G. , Polikanov, Y.S. , Ramkissoon, A. , Robinson, P.J. , See, D.N.Y. , Svetlov, M.S. , Tresco, B.I.C. , Wu, K.J.Y. , Yu, M.
Date: 2024-08-07 Method: X-RAY DIFFRACTION Resolution: 2.5 Å Organism(s): Adineta Vaga , Fragaria Ananassa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) Sequences Data: 9D0H_1A , 9D0H_2A , 9D0H_1O , 9D0H_2O , 9D0H_1P , 9D0H_2P , 9D0H_1Q , 9D0H_2Q , 9D0H_1R , 9D0H_2R , 9D0H_1S , 9D0H_2S , 9D0H_1T , 9D0H_2T , 9D0H_1U , 9D0H_2U , 9D0H_1V , 9D0H_2V , 9D0H_1W , 9D0H_2W , 9D0H_1X , 9D0H_2X , 9D0H_1B , 9D0H_2B , 9D0H_1Y , 9D0H_2Y , 9D0H_1Z , 9D0H_2Z , 9D0H_10 , 9D0H_20 , 9D0H_11 , 9D0H_21 , 9D0H_12 , 9D0H_22 , 9D0H_13 , 9D0H_23 , 9D0H_14 , 9D0H_24 , 9D0H_15 , 9D0H_25 , 9D0H_16 , 9D0H_26 , 9D0H_17 , 9D0H_27 , 9D0H_1D , 9D0H_2D , 9D0H_18 , 9D0H_28 , 9D0H_19 , 9D0H_29 , 9D0H_1C , 9D0H_2C , 9D0H_1E , 9D0H_2E , 9D0H_1F , 9D0H_2F , 9D0H_1G , 9D0H_2G , 9D0H_1H , 9D0H_2H , 9D0H_1I , 9D0H_2I , 9D0H_1J , 9D0H_2J , 9D0H_1K , 9D0H_2K , 9D0H_1L , 9D0H_2L , 9D0H_1M , 9D0H_2M , 9D0H_1N , 9D0H_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with se-cresomycin, mrna, deacylated a-site trnaphe, aminoacylated p-site fmet-trnamet, and deacylated e-site trnaphe at 2.45a resolution Deposition Author(s): Aleksandrova, E.V. , Benedetto, A.E. , Dunand, C.F. , Jiang, T. , Lee, J. , Myers, A.G. , Polikanov, Y.S. , Ramkissoon, A. , Robinson, P.J. , See, D.N.Y. , Svetlov, M.S. , Tresco, B.I.C. , Wu, K.J.Y. , Yu, M.
Date: 2024-08-07 Method: X-RAY DIFFRACTION Resolution: 2.45 Å Organism(s): Adineta Vaga , Fragaria Ananassa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) Sequences Data: 9D0I_1A , 9D0I_2A , 9D0I_1O , 9D0I_2O , 9D0I_1P , 9D0I_2P , 9D0I_1Q , 9D0I_2Q , 9D0I_1R , 9D0I_2R , 9D0I_1S , 9D0I_2S , 9D0I_1T , 9D0I_2T , 9D0I_1U , 9D0I_2U , 9D0I_1V , 9D0I_2V , 9D0I_1W , 9D0I_2W , 9D0I_1X , 9D0I_2X , 9D0I_1B , 9D0I_2B , 9D0I_1Y , 9D0I_2Y , 9D0I_1Z , 9D0I_2Z , 9D0I_10 , 9D0I_20 , 9D0I_11 , 9D0I_21 , 9D0I_12 , 9D0I_22 , 9D0I_13 , 9D0I_23 , 9D0I_14 , 9D0I_24 , 9D0I_15 , 9D0I_25 , 9D0I_16 , 9D0I_26 , 9D0I_17 , 9D0I_27 , 9D0I_1D , 9D0I_2D , 9D0I_18 , 9D0I_28 , 9D0I_19 , 9D0I_29 , 9D0I_1C , 9D0I_2C , 9D0I_1E , 9D0I_2E , 9D0I_1F , 9D0I_2F , 9D0I_1G , 9D0I_2G , 9D0I_1H , 9D0I_2H , 9D0I_1I , 9D0I_2I , 9D0I_1J , 9D0I_2J , 9D0I_1K , 9D0I_2K , 9D0I_1L , 9D0I_2L , 9D0I_1M , 9D0I_2M , 9D0I_1N , 9D0I_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with bt-33, mrna, deacylated a-site trnaphe, aminoacylated p-site fmet-trnamet, and deacylated e-site trnaphe at 2.50a resolution Deposition Author(s): Aleksandrova, E.V. , Liu, R.Y. , Myers, A.G. , Polikanov, Y.S. , Purdy, M. , Ramkissoon, A. , See, D.N.Y. , Tresco, B.I.C. , Wu, K.J.Y.
Date: 2024-08-07 Method: X-RAY DIFFRACTION Resolution: 2.5 Å Organism(s): Adineta Vaga , Fragaria Ananassa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) Sequences Data: 9D0J_1A , 9D0J_2A , 9D0J_1O , 9D0J_2O , 9D0J_1P , 9D0J_2P , 9D0J_1Q , 9D0J_2Q , 9D0J_1R , 9D0J_2R , 9D0J_1S , 9D0J_2S , 9D0J_1T , 9D0J_2T , 9D0J_1U , 9D0J_2U , 9D0J_1V , 9D0J_2V , 9D0J_1W , 9D0J_2W , 9D0J_1X , 9D0J_2X , 9D0J_1B , 9D0J_2B , 9D0J_1Y , 9D0J_2Y , 9D0J_1Z , 9D0J_2Z , 9D0J_10 , 9D0J_20 , 9D0J_11 , 9D0J_21 , 9D0J_12 , 9D0J_22 , 9D0J_13 , 9D0J_23 , 9D0J_14 , 9D0J_24 , 9D0J_15 , 9D0J_25 , 9D0J_16 , 9D0J_26 , 9D0J_17 , 9D0J_27 , 9D0J_1D , 9D0J_2D , 9D0J_18 , 9D0J_28 , 9D0J_19 , 9D0J_29 , 9D0J_1C , 9D0J_2C , 9D0J_1E , 9D0J_2E , 9D0J_1F , 9D0J_2F , 9D0J_1G , 9D0J_2G , 9D0J_1H , 9D0J_2H , 9D0J_1I , 9D0J_2I , 9D0J_1J , 9D0J_2J , 9D0J_1K , 9D0J_2K , 9D0J_1L , 9D0J_2L , 9D0J_1M , 9D0J_2M , 9D0J_1N , 9D0J_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with fva1 antimicrobial peptide, mrna, a-site release factor 1, and deacylated p-site and e-site trnaphe at 2.70a resolution Deposition Author(s): Aleksandrova, E.V. , Atkinson, G.C. , Baliga, C. , Huang, W. , Mankin, A.S. , Polikanov, Y.S. , Vazquez-Laslop, N.
Date: 2024-08-17 Method: X-RAY DIFFRACTION Resolution: 2.7 Å Organism(s): Adineta Vaga , Fragaria Ananassa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) Sequences Data: 9D7R_1A , 9D7R_2A , 9D7R_1O , 9D7R_2O , 9D7R_1P , 9D7R_2P , 9D7R_1Q , 9D7R_2Q , 9D7R_1R , 9D7R_2R , 9D7R_1S , 9D7R_2S , 9D7R_1T , 9D7R_2T , 9D7R_1U , 9D7R_2U , 9D7R_1V , 9D7R_2V , 9D7R_1W , 9D7R_2W , 9D7R_1X , 9D7R_2X , 9D7R_1B , 9D7R_2B , 9D7R_1Y , 9D7R_2Y , 9D7R_1Z , 9D7R_2Z , 9D7R_10 , 9D7R_20 , 9D7R_11 , 9D7R_21 , 9D7R_12 , 9D7R_22 , 9D7R_13 , 9D7R_23 , 9D7R_14 , 9D7R_24 , 9D7R_15 , 9D7R_25 , 9D7R_16 , 9D7R_26 , 9D7R_17 , 9D7R_27 , 9D7R_1D , 9D7R_2D , 9D7R_18 , 9D7R_28 , 9D7R_19 , 9D7R_29 , 9D7R_1C , 9D7R_2C , 9D7R_1E , 9D7R_2E , 9D7R_1F , 9D7R_2F , 9D7R_1G , 9D7R_2G , 9D7R_1H , 9D7R_2H , 9D7R_1I , 9D7R_2I , 9D7R_1J , 9D7R_2J , 9D7R_1K , 9D7R_2K , 9D7R_1L , 9D7R_2L , 9D7R_1M , 9D7R_2M , 9D7R_1N , 9D7R_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with api antimicrobial peptide, mrna, a-site release factor 1, and deacylated p-site and e-site trnaphe at 2.85a resolution Deposition Author(s): Aleksandrova, E.V. , Atkinson, G.C. , Baliga, C. , Huang, W. , Mankin, A.S. , Polikanov, Y.S. , Vazquez-Laslop, N.
Date: 2024-08-17 Method: X-RAY DIFFRACTION Resolution: 2.85 Å Organism(s): Adineta Vaga , Fragaria Ananassa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) Sequences Data: 9D7S_1A , 9D7S_2A , 9D7S_1O , 9D7S_2O , 9D7S_1P , 9D7S_2P , 9D7S_1Q , 9D7S_2Q , 9D7S_1R , 9D7S_2R , 9D7S_1S , 9D7S_2S , 9D7S_1T , 9D7S_2T , 9D7S_1U , 9D7S_2U , 9D7S_1V , 9D7S_2V , 9D7S_1W , 9D7S_2W , 9D7S_1X , 9D7S_2X , 9D7S_1B , 9D7S_2B , 9D7S_1Y , 9D7S_2Y , 9D7S_1Z , 9D7S_2Z , 9D7S_10 , 9D7S_20 , 9D7S_11 , 9D7S_21 , 9D7S_12 , 9D7S_22 , 9D7S_13 , 9D7S_23 , 9D7S_14 , 9D7S_24 , 9D7S_15 , 9D7S_25 , 9D7S_16 , 9D7S_26 , 9D7S_17 , 9D7S_27 , 9D7S_1D , 9D7S_2D , 9D7S_18 , 9D7S_28 , 9D7S_19 , 9D7S_29 , 9D7S_1C , 9D7S_2C , 9D7S_1E , 9D7S_2E , 9D7S_1F , 9D7S_2F , 9D7S_1G , 9D7S_2G , 9D7S_1H , 9D7S_2H , 9D7S_1I , 9D7S_2I , 9D7S_1J , 9D7S_2J , 9D7S_1K , 9D7S_2K , 9D7S_1L , 9D7S_2L , 9D7S_1M , 9D7S_2M , 9D7S_1N , 9D7S_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with api137 antimicrobial peptide, mrna, a-site release factor 1, and deacylated p-site and e-site trnaphe at 2.70a resolution Deposition Author(s): Aleksandrova, E.V. , Atkinson, G.C. , Baliga, C. , Huang, W. , Mankin, A.S. , Polikanov, Y.S. , Vazquez-Laslop, N.
Date: 2024-08-17 Method: X-RAY DIFFRACTION Resolution: 2.7 Å Organism(s): Adineta Vaga , Fragaria Ananassa , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) Sequences Data: 9D7T_1A , 9D7T_2A , 9D7T_1O , 9D7T_2O , 9D7T_1P , 9D7T_2P , 9D7T_1Q , 9D7T_2Q , 9D7T_1R , 9D7T_2R , 9D7T_1S , 9D7T_2S , 9D7T_1T , 9D7T_2T , 9D7T_1U , 9D7T_2U , 9D7T_1V , 9D7T_2V , 9D7T_1W , 9D7T_2W , 9D7T_1X , 9D7T_2X , 9D7T_1B , 9D7T_2B , 9D7T_1Y , 9D7T_2Y , 9D7T_1Z , 9D7T_2Z , 9D7T_10 , 9D7T_20 , 9D7T_11 , 9D7T_21 , 9D7T_12 , 9D7T_22 , 9D7T_13 , 9D7T_23 , 9D7T_14 , 9D7T_24 , 9D7T_15 , 9D7T_25 , 9D7T_16 , 9D7T_26 , 9D7T_17 , 9D7T_27 , 9D7T_1D , 9D7T_2D , 9D7T_18 , 9D7T_28 , 9D7T_19 , 9D7T_29 , 9D7T_1C , 9D7T_2C , 9D7T_1E , 9D7T_2E , 9D7T_1F , 9D7T_2F , 9D7T_1G , 9D7T_2G , 9D7T_1H , 9D7T_2H , 9D7T_1I , 9D7T_2I , 9D7T_1J , 9D7T_2J , 9D7T_1K , 9D7T_2K , 9D7T_1L , 9D7T_2L , 9D7T_1M , 9D7T_2M , 9D7T_1N , 9D7T_2N