Cryo-em structure of the nucleosome in complex with p53 Deposition Author(s): Kurumizaka, H. , Nishimura, M. , Nozawa, K. , Takizawa, Y.
Date: 2022-06-03 Method: ELECTRON MICROSCOPY Resolution: 4.07 Å Organism(s): Homo Sapiens , Synthetic Construct Sequences Data: 7XZZ_A , 7XZZ_E , 7XZZ_B , 7XZZ_F , 7XZZ_C , 7XZZ_G , 7XZZ_D , 7XZZ_H , 7XZZ_I , 7XZZ_J , 7XZZ_K , 7XZZ_L , 7XZZ_M , 7XZZ_N
Cryo-em structure of the nucleosome containing 169 base-pair dna with a p53 target sequence Deposition Author(s): Kurumizaka, H. , Nishimura, M. , Nozawa, K. , Takizawa, Y.
Date: 2022-06-03 Method: ELECTRON MICROSCOPY Resolution: 3.96 Å Organism(s): Homo Sapiens , Synthetic Construct Sequences Data: 7Y00_A , 7Y00_E , 7Y00_B , 7Y00_F , 7Y00_C , 7Y00_G , 7Y00_D , 7Y00_H , 7Y00_I , 7Y00_J
Human k-ras g12d (gdp-bound) in complex with cyclic peptide inhibitor luna18 and ka30l fab Deposition Author(s): Fukami, T.A. , Irie, M. , Matsuo, A. , Nishimura, M. , Ohta, A. , Saito, H. , Saka, K. , Tanada, M. , Torizawa, T.
Date: 2022-08-18 Method: X-RAY DIFFRACTION Resolution: 1.454 Å Organism(s): Homo Sapiens , Synthetic Construct Sequences Data: 7YV1_A , 7YV1_H , 7YV1_L , 7YV1_I
Conformation 1 of sars-cov-2 omicron ba.1 variant spike protein complexed with mo1 fab Deposition Author(s): Hasegawa, N. , Ishimaru, H. , Kato, K. , Mori, Y. , Nishimura, M. , Shigematsu, H. , Sutandhio, S.
Date: 2022-10-09 Method: ELECTRON MICROSCOPY Resolution: 2.48 Å Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 Sequences Data: 8H3M_A , 8H3M_B , 8H3M_C , 8H3M_D , 8H3M_H
Conformation 2 of sars-cov-2 omicron ba.1 variant spike protein complexed with mo1 fab Deposition Author(s): Hasegawa, N. , Ishimaru, H. , Kato, K. , Mori, Y. , Nishimura, M. , Shigematsu, H. , Sutandhio, S.
Date: 2022-10-09 Method: ELECTRON MICROSCOPY Resolution: 2.73 Å Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 Sequences Data: 8H3N_A , 8H3N_B , 8H3N_C , 8H3N_D , 8H3N_H , 8H3N_E , 8H3N_I
Overlapping tri-nucleosome Deposition Author(s): Fujii, T. , Kurumizaka, H. , Maehara, K. , Nishimura, M. , Nozawa, K. , Ohkawa, Y. , Takizawa, Y. , Tanaka, H.
Date: 2023-02-23 Method: ELECTRON MICROSCOPY Resolution: 7.64 Å Organism(s): Homo Sapiens , Synthetic Construct Sequences Data: 8IHL_A , 8IHL_E , 8IHL_K , 8IHL_M , 8IHL_Q , 8IHL_U , 8IHL_B , 8IHL_F , 8IHL_L , 8IHL_N , 8IHL_R , 8IHL_V , 8IHL_C , 8IHL_G , 8IHL_O , 8IHL_S , 8IHL_D , 8IHL_H , 8IHL_P , 8IHL_T , 8IHL_I , 8IHL_J
Sars-cov-2 omicron bq.1.1 variant spike protein complexed with mo11 fab Deposition Author(s): Hasegawa, N. , Ishimaru, H. , Iwata, S. , Marini, M.I. , Mori, Y. , Nishimura, M. , Shigematsu, H. , Takamiya, R.
Date: 2023-12-19 Method: ELECTRON MICROSCOPY Resolution: 2.3 Å Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 Sequences Data: 8XI6_A , 8XI6_B , 8XI6_C , 8XI6_D , 8XI6_F , 8XI6_H , 8XI6_E , 8XI6_G , 8XI6_I
Cryo-em structure of the overlapping di-nucleosome (closed form) Deposition Author(s): Ehara, H. , Kurumizaka, H. , Nishimura, M. , Nozawa, K. , Sekine, S. , Takizawa, Y. , Tanaka, H.
Date: 2024-01-29 Method: ELECTRON MICROSCOPY Resolution: 5.21 Å Organism(s): Homo Sapiens , Synthetic Construct Sequences Data: 8Y3C_A , 8Y3C_E , 8Y3C_K , 8Y3C_O , 8Y3C_B , 8Y3C_F , 8Y3C_L , 8Y3C_P , 8Y3C_C , 8Y3C_G , 8Y3C_M , 8Y3C_D , 8Y3C_H , 8Y3C_N , 8Y3C_I , 8Y3C_J
Cryo-em structure of the overlapping di-nucleosome (intermediate form2) Deposition Author(s): Ehara, H. , Kurumizaka, H. , Nishimura, M. , Nozawa, K. , Sekine, S. , Takizawa, Y. , Tanaka, H.
Date: 2024-01-29 Method: ELECTRON MICROSCOPY Resolution: 5.1 Å Organism(s): Homo Sapiens , Synthetic Construct Sequences Data: 8Y3D_A , 8Y3D_E , 8Y3D_K , 8Y3D_O , 8Y3D_B , 8Y3D_F , 8Y3D_L , 8Y3D_P , 8Y3D_C , 8Y3D_G , 8Y3D_M , 8Y3D_D , 8Y3D_H , 8Y3D_N , 8Y3D_I , 8Y3D_J
Cryo-em structure of the overlapping di-nucleosome (open form) Deposition Author(s): Ehara, H. , Kurumizaka, H. , Nishimura, M. , Nozawa, K. , Sekine, S. , Takizawa, Y. , Tanaka, H.
Date: 2024-01-29 Method: ELECTRON MICROSCOPY Resolution: 5.32 Å Organism(s): Homo Sapiens , Synthetic Construct Sequences Data: 8Y3E_A , 8Y3E_E , 8Y3E_K , 8Y3E_O , 8Y3E_B , 8Y3E_F , 8Y3E_L , 8Y3E_P , 8Y3E_C , 8Y3E_G , 8Y3E_M , 8Y3E_D , 8Y3E_H , 8Y3E_N , 8Y3E_I , 8Y3E_J