Search Query :
4Y4O
Crystal structure of the thermus thermophilus 70s ribosome with rrna modifications and bound to protein y (yfia) at 2.3a resolution Deposition Author(s): Melnikov, S.V. , Polikanov, Y.S. , Soll, D. , Steitz, T.A.
Date: 2015-02-10 Method: X-RAY DIFFRACTION Resolution: 2.3 Å Organism(s): Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 Sequences Data: 4Y4O_1A , 4Y4O_2A , 4Y4O_1O , 4Y4O_2O , 4Y4O_1P , 4Y4O_2P , 4Y4O_1Q , 4Y4O_2Q , 4Y4O_1R , 4Y4O_2R , 4Y4O_1S , 4Y4O_2S , 4Y4O_1T , 4Y4O_2T , 4Y4O_1U , 4Y4O_2U , 4Y4O_1V , 4Y4O_2V , 4Y4O_1W , 4Y4O_2W , 4Y4O_1X , 4Y4O_2X , 4Y4O_1B , 4Y4O_2B , 4Y4O_1Y , 4Y4O_2Y , 4Y4O_1Z , 4Y4O_2Z , 4Y4O_10 , 4Y4O_20 , 4Y4O_11 , 4Y4O_21 , 4Y4O_12 , 4Y4O_22 , 4Y4O_13 , 4Y4O_23 , 4Y4O_14 , 4Y4O_24 , 4Y4O_15 , 4Y4O_25 , 4Y4O_16 , 4Y4O_26 , 4Y4O_17 , 4Y4O_27 , 4Y4O_1D , 4Y4O_2D , 4Y4O_18 , 4Y4O_28 , 4Y4O_19 , 4Y4O_29 , 4Y4O_1C , 4Y4O_2C , 4Y4O_1E , 4Y4O_2E , 4Y4O_1F , 4Y4O_2F , 4Y4O_1G , 4Y4O_2G , 4Y4O_1H , 4Y4O_2H , 4Y4O_1I , 4Y4O_2I , 4Y4O_1J , 4Y4O_2J , 4Y4O_1K , 4Y4O_2K , 4Y4O_1L , 4Y4O_2L , 4Y4O_1M , 4Y4O_2M , 4Y4O_1N , 4Y4O_2N
4Y4P
Crystal structure of the thermus thermophilus 70s ribosome with rrna modifications and bound to mrna and a-, p- and e-site trnas at 2.5a resolution Deposition Author(s): Melnikov, S.V. , Polikanov, Y.S. , Soll, D. , Steitz, T.A.
Date: 2015-02-10 Method: X-RAY DIFFRACTION Resolution: 2.5 Å Organism(s): Escherichia Coli , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 4Y4P_1A , 4Y4P_2A , 4Y4P_1O , 4Y4P_2O , 4Y4P_1P , 4Y4P_2P , 4Y4P_1Q , 4Y4P_2Q , 4Y4P_1R , 4Y4P_2R , 4Y4P_1S , 4Y4P_2S , 4Y4P_1T , 4Y4P_2T , 4Y4P_1U , 4Y4P_2U , 4Y4P_1V , 4Y4P_2V , 4Y4P_1W , 4Y4P_2W , 4Y4P_1X , 4Y4P_2X , 4Y4P_1B , 4Y4P_2B , 4Y4P_1Y , 4Y4P_2Y , 4Y4P_1Z , 4Y4P_2Z , 4Y4P_10 , 4Y4P_20 , 4Y4P_11 , 4Y4P_21 , 4Y4P_12 , 4Y4P_22 , 4Y4P_13 , 4Y4P_23 , 4Y4P_14 , 4Y4P_24 , 4Y4P_15 , 4Y4P_25 , 4Y4P_16 , 4Y4P_26 , 4Y4P_17 , 4Y4P_27 , 4Y4P_1D , 4Y4P_2D , 4Y4P_18 , 4Y4P_28 , 4Y4P_19 , 4Y4P_29 , 4Y4P_1C , 4Y4P_2C , 4Y4P_1E , 4Y4P_2E , 4Y4P_1F , 4Y4P_2F , 4Y4P_1G , 4Y4P_2G , 4Y4P_1H , 4Y4P_2H , 4Y4P_1I , 4Y4P_2I , 4Y4P_1J , 4Y4P_2J , 4Y4P_1K , 4Y4P_2K , 4Y4P_1L , 4Y4P_2L , 4Y4P_1M , 4Y4P_2M , 4Y4P_1N , 4Y4P_2N
5J4B
Crystal structure of the thermus thermophilus 70s ribosome in complex with cisplatin (co-crystallized) and bound to mrna and a-, p- and e-site trnas at 2.6a resolution Deposition Author(s): Melnikov, S.V. , Polikanov, Y.S. , Soll, D. , Steitz, T.A.
Date: 2016-03-31 Method: X-RAY DIFFRACTION Resolution: 2.6 Å Organism(s): Escherichia Coli , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 5J4B_1A , 5J4B_2A , 5J4B_1O , 5J4B_2O , 5J4B_1P , 5J4B_2P , 5J4B_1Q , 5J4B_2Q , 5J4B_1R , 5J4B_2R , 5J4B_1S , 5J4B_2S , 5J4B_1T , 5J4B_2T , 5J4B_1U , 5J4B_2U , 5J4B_1V , 5J4B_2V , 5J4B_1W , 5J4B_2W , 5J4B_1X , 5J4B_2X , 5J4B_1B , 5J4B_2B , 5J4B_1Y , 5J4B_2Y , 5J4B_1Z , 5J4B_2Z , 5J4B_10 , 5J4B_20 , 5J4B_11 , 5J4B_21 , 5J4B_12 , 5J4B_22 , 5J4B_13 , 5J4B_23 , 5J4B_14 , 5J4B_24 , 5J4B_15 , 5J4B_25 , 5J4B_16 , 5J4B_26 , 5J4B_17 , 5J4B_27 , 5J4B_1D , 5J4B_2D , 5J4B_18 , 5J4B_28 , 5J4B_19 , 5J4B_29 , 5J4B_1C , 5J4B_2C , 5J4B_1E , 5J4B_2E , 5J4B_1F , 5J4B_2F , 5J4B_1G , 5J4B_2G , 5J4B_1H , 5J4B_2H , 5J4B_1I , 5J4B_2I , 5J4B_1J , 5J4B_2J , 5J4B_1K , 5J4B_2K , 5J4B_1L , 5J4B_2L , 5J4B_1M , 5J4B_2M , 5J4B_1N , 5J4B_2N
5J4C
Crystal structure of the thermus thermophilus 70s ribosome in complex with cisplatin (soaked) and bound to mrna and a-, p- and e-site trnas at 2.8a resolution Deposition Author(s): Melnikov, S.V. , Polikanov, Y.S. , Soll, D. , Steitz, T.A.
Date: 2016-03-31 Method: X-RAY DIFFRACTION Resolution: 2.8 Å Organism(s): Escherichia Coli , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 5J4C_1A , 5J4C_2A , 5J4C_1O , 5J4C_2O , 5J4C_1P , 5J4C_2P , 5J4C_1Q , 5J4C_2Q , 5J4C_1R , 5J4C_2R , 5J4C_1S , 5J4C_2S , 5J4C_1T , 5J4C_2T , 5J4C_1U , 5J4C_2U , 5J4C_1V , 5J4C_2V , 5J4C_1W , 5J4C_2W , 5J4C_1X , 5J4C_2X , 5J4C_1B , 5J4C_2B , 5J4C_1Y , 5J4C_2Y , 5J4C_1Z , 5J4C_2Z , 5J4C_10 , 5J4C_20 , 5J4C_11 , 5J4C_21 , 5J4C_12 , 5J4C_22 , 5J4C_13 , 5J4C_23 , 5J4C_14 , 5J4C_24 , 5J4C_15 , 5J4C_25 , 5J4C_16 , 5J4C_26 , 5J4C_17 , 5J4C_27 , 5J4C_1D , 5J4C_2D , 5J4C_18 , 5J4C_28 , 5J4C_19 , 5J4C_29 , 5J4C_1C , 5J4C_2C , 5J4C_1E , 5J4C_2E , 5J4C_1F , 5J4C_2F , 5J4C_1G , 5J4C_2G , 5J4C_1H , 5J4C_2H , 5J4C_1I , 5J4C_2I , 5J4C_1J , 5J4C_2J , 5J4C_1K , 5J4C_2K , 5J4C_1L , 5J4C_2L , 5J4C_1M , 5J4C_2M , 5J4C_1N , 5J4C_2N
6N9E
Crystal structure of the thermus thermophilus 70s ribosome in complex with a short substrate mimic cc-pmn and bound to mrna and p-site trna at 3.7a resolution Deposition Author(s): Khabibullina, N.F. , Mairhofer, E. , Melnikov, S.V. , Micura, R. , Polikanov, Y.S. , Reynolds, N.M. , Soll, D. , Vargas-Rodriguez, O.
Date: 2018-12-03 Method: X-RAY DIFFRACTION Resolution: 3.7 Å Organism(s): Escherichia Coli , Thermus Thermophilus , Synthetic Construct Sequences Data: 6N9E_1A , 6N9E_2A , 6N9E_1O , 6N9E_2O , 6N9E_1P , 6N9E_2P , 6N9E_1Q , 6N9E_2Q , 6N9E_1R , 6N9E_2R , 6N9E_1S , 6N9E_2S , 6N9E_1T , 6N9E_2T , 6N9E_1U , 6N9E_2U , 6N9E_1V , 6N9E_2V , 6N9E_1W , 6N9E_2W , 6N9E_1X , 6N9E_2X , 6N9E_1B , 6N9E_2B , 6N9E_1Y , 6N9E_2Y , 6N9E_1Z , 6N9E_2Z , 6N9E_10 , 6N9E_20 , 6N9E_11 , 6N9E_21 , 6N9E_12 , 6N9E_22 , 6N9E_13 , 6N9E_23 , 6N9E_14 , 6N9E_24 , 6N9E_15 , 6N9E_25 , 6N9E_16 , 6N9E_26 , 6N9E_17 , 6N9E_27 , 6N9E_1D , 6N9E_2D , 6N9E_18 , 6N9E_28 , 6N9E_19 , 6N9E_29 , 6N9E_1C , 6N9E_2C , 6N9E_1E , 6N9E_2E , 6N9E_1F , 6N9E_2F , 6N9E_1G , 6N9E_2G , 6N9E_1H , 6N9E_2H , 6N9E_1I , 6N9E_2I , 6N9E_1J , 6N9E_2J , 6N9E_1K , 6N9E_2K , 6N9E_1L , 6N9E_2L , 6N9E_1M , 6N9E_2M , 6N9E_1N , 6N9E_2N
6N9F
Crystal structure of the thermus thermophilus 70s ribosome in complex with a short substrate mimic acca-dphe and bound to mrna and p-site trna at 3.7a resolution Deposition Author(s): Khabibullina, N.F. , Mairhofer, E. , Melnikov, S.V. , Micura, R. , Polikanov, Y.S. , Reynolds, N.M. , Soll, D. , Vargas-Rodriguez, O.
Date: 2018-12-03 Method: X-RAY DIFFRACTION Resolution: 3.7 Å Organism(s): Escherichia Coli , Thermus Thermophilus , Synthetic Construct Sequences Data: 6N9F_1A , 6N9F_2A , 6N9F_1O , 6N9F_2O , 6N9F_1P , 6N9F_2P , 6N9F_1Q , 6N9F_2Q , 6N9F_1R , 6N9F_2R , 6N9F_1S , 6N9F_2S , 6N9F_1T , 6N9F_2T , 6N9F_1U , 6N9F_2U , 6N9F_1V , 6N9F_2V , 6N9F_1W , 6N9F_2W , 6N9F_1X , 6N9F_2X , 6N9F_1B , 6N9F_2B , 6N9F_1Y , 6N9F_2Y , 6N9F_1Z , 6N9F_2Z , 6N9F_10 , 6N9F_20 , 6N9F_11 , 6N9F_21 , 6N9F_12 , 6N9F_22 , 6N9F_13 , 6N9F_23 , 6N9F_14 , 6N9F_24 , 6N9F_15 , 6N9F_25 , 6N9F_16 , 6N9F_26 , 6N9F_17 , 6N9F_27 , 6N9F_1D , 6N9F_2D , 6N9F_18 , 6N9F_28 , 6N9F_19 , 6N9F_29 , 6N9F_1C , 6N9F_2C , 6N9F_1E , 6N9F_2E , 6N9F_1F , 6N9F_2F , 6N9F_1G , 6N9F_2G , 6N9F_1H , 6N9F_2H , 6N9F_1I , 6N9F_2I , 6N9F_1J , 6N9F_2J , 6N9F_1K , 6N9F_2K , 6N9F_1L , 6N9F_2L , 6N9F_1M , 6N9F_2M , 6N9F_1N , 6N9F_2N
7QEP
Cryo-em structure of the ribosome from encephalitozoon cuniculi Deposition Author(s): Melnikov, S.V. , Nicholson, D. , Ranson, N.A.
Date: 2021-12-03 Method: ELECTRON MICROSCOPY Resolution: 2.7 Å Organism(s): Encephalitozoon Cuniculi Gb-M1 Sequences Data: 7QEP_RA , 7QEP_C5 , 7QEP_C6 , 7QEP_C7 , 7QEP_C8 , 7QEP_C9 , 7QEP_D0 , 7QEP_D1 , 7QEP_D2 , 7QEP_D3 , 7QEP_D4 , 7QEP_1 , 7QEP_D5 , 7QEP_D6 , 7QEP_D7 , 7QEP_D8 , 7QEP_D9 , 7QEP_E1 , 7QEP_L1 , 7QEP_L2 , 7QEP_L3 , 7QEP_L4 , 7QEP_2 , 7QEP_L5 , 7QEP_L6 , 7QEP_L7 , 7QEP_L8 , 7QEP_L9 , 7QEP_M0 , 7QEP_M1 , 7QEP_M3 , 7QEP_M4 , 7QEP_M5 , 7QEP_3 , 7QEP_M6 , 7QEP_M7 , 7QEP_M8 , 7QEP_M9 , 7QEP_MD , 7QEP_MS , 7QEP_N0 , 7QEP_N1 , 7QEP_N2 , 7QEP_N3 , 7QEP_C0 , 7QEP_N4 , 7QEP_N5 , 7QEP_N6 , 7QEP_N7 , 7QEP_N8 , 7QEP_N9 , 7QEP_O0 , 7QEP_O1 , 7QEP_O2 , 7QEP_O3 , 7QEP_C1 , 7QEP_O4 , 7QEP_O5 , 7QEP_O6 , 7QEP_O7 , 7QEP_O9 , 7QEP_P0 , 7QEP_P2 , 7QEP_P3 , 7QEP_S0 , 7QEP_S1 , 7QEP_C2 , 7QEP_S2 , 7QEP_S3 , 7QEP_S4 , 7QEP_S5 , 7QEP_S6 , 7QEP_S7 , 7QEP_S8 , 7QEP_S9 , 7QEP_C3 , 7QEP_C4
8RD8
Cryo-em structure of p. urativorans 70s ribosome in complex with hibernation factors balon and raia (structure 1). Deposition Author(s): Gagnon, M.G. , Helena-Bueno, K. , Hill, C.H. , Melnikov, S.V. , Rybak, M.Y.
Date: 2023-12-07 Method: ELECTRON MICROSCOPY Resolution: 2.62 Å Organism(s): Psychrobacter Urativorans Sequences Data: 8RD8_B , 8RD8_F7 , 8RD8_D8 , 8RD8_E9 , 8RD8_AA , 8RD8_MB , 8RD8_UC , 8RD8_WD , 8RD8_XE , 8RD8_RF , 8RD8_FG , 8RD8_F , 8RD8_VH , 8RD8_TI , 8RD8_FJ , 8RD8_HK , 8RD8_OL , 8RD8_MM , 8RD8_IN , 8RD8_PO , 8RD8_SP , 8RD8_BQ , 8RD8_H , 8RD8_GR , 8RD8_GS , 8RD8_CT , 8RD8_KU , 8RD8_NV , 8RD8_YW , 8RD8_IX , 8RD8_JY , 8RD8_QZ , 8RD8_BA , 8RD8_C1 , 8RD8_QB , 8RD8_NC , 8RD8_KD , 8RD8_JE , 8RD8_AF , 8RD8_LG , 8RD8_DH , 8RD8_OI , 8RD8_PJ , 8RD8_BK , 8RD8_Z2 , 8RD8_CL , 8RD8_DM , 8RD8_SN , 8RD8_TO , 8RD8_EP , 8RD8_D , 8RD8_R3 , 8RD8_A4 , 8RD8_E5 , 8RD8_L6
8RDV
Cryo-em structure of p. urativorans 70s ribosome in complex with hibernation factor balon, mrna and p-site trna (structure 2). Deposition Author(s): Gagnon, M.G. , Helena-Bueno, K. , Hill, C.H. , Melnikov, S.V. , Rybak, M.Y.
Date: 2023-12-08 Method: ELECTRON MICROSCOPY Resolution: 2.6 Å Organism(s): Psychrobacter Urativorans , Synthetic Construct Sequences Data: 8RDV_B , 8RDV_D8 , 8RDV_E9 , 8RDV_AA , 8RDV_MB , 8RDV_UC , 8RDV_WD , 8RDV_XE , 8RDV_RF , 8RDV_FG , 8RDV_VH , 8RDV_F , 8RDV_TI , 8RDV_FJ , 8RDV_HK , 8RDV_OL , 8RDV_MM , 8RDV_PO , 8RDV_SP , 8RDV_BQ , 8RDV_GR , 8RDV_GS , 8RDV_H , 8RDV_CT , 8RDV_KU , 8RDV_NV , 8RDV_YW , 8RDV_IX , 8RDV_JY , 8RDV_QZ , 8RDV_BA , 8RDV_QB , 8RDV_NC , 8RDV_Z2 , 8RDV_KD , 8RDV_JE , 8RDV_AF , 8RDV_LG , 8RDV_DH , 8RDV_OI , 8RDV_PJ , 8RDV_BK , 8RDV_CL , 8RDV_DM , 8RDV_R3 , 8RDV_SN , 8RDV_TO , 8RDV_EP , 8RDV_V , 8RDV_Y , 8RDV_C1 , 8RDV_IN , 8RDV_A4 , 8RDV_E5 , 8RDV_L6 , 8RDV_F7
8RDW
Cryo-em structure of p. urativorans 70s ribosome in complex with hibernation factor balon and ef-tu(gdp) (structure 3). Deposition Author(s): Gagnon, M.G. , Helena-Bueno, K. , Hill, C.H. , Melnikov, S.V. , Rybak, M.Y.
Date: 2023-12-08 Method: ELECTRON MICROSCOPY Resolution: 2.74 Å Organism(s): Psychrobacter Urativorans Sequences Data: 8RDW_B , 8RDW_F7 , 8RDW_D8 , 8RDW_E9 , 8RDW_AA , 8RDW_MB , 8RDW_UC , 8RDW_WD , 8RDW_XE , 8RDW_RF , 8RDW_FG , 8RDW_D , 8RDW_VH , 8RDW_TI , 8RDW_FJ , 8RDW_HK , 8RDW_OL , 8RDW_MM , 8RDW_IN , 8RDW_PO , 8RDW_SP , 8RDW_BQ , 8RDW_F , 8RDW_GR , 8RDW_GS , 8RDW_CT , 8RDW_KU , 8RDW_NV , 8RDW_YW , 8RDW_IX , 8RDW_JY , 8RDW_QZ , 8RDW_BA , 8RDW_H , 8RDW_QB , 8RDW_NC , 8RDW_KD , 8RDW_JE , 8RDW_AF , 8RDW_LG , 8RDW_DH , 8RDW_OI , 8RDW_PJ , 8RDW_BK , 8RDW_Z2 , 8RDW_CL , 8RDW_DM , 8RDW_SN , 8RDW_TO , 8RDW_EP , 8RDW_C1 , 8RDW_R3 , 8RDW_A4 , 8RDW_E5 , 8RDW_L6