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FASTA Sequence PDB Format mmCIF Format
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9ZGD

Crystal structure of vrc42.01 fab in the presence of hiv-1 gp41 mper peptide and phosphatidic acid (06:0 pa); unliganded form

PDB DOI: 10.2210/pdb9zgd/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2025-12-02
Deposition Author(s): Cho, S.Y. , Wilson, I.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.1 Å

Literature

Crystal structure of vrc42.01 fab in the presence of hiv-1 gp41 mper peptide and phosphatidic acid (06:0 pa); unliganded form

Cho, S.Y. , Wilson, I.A.

Primary Citation of Related Structures: 9ZGD


Proteins
Molecule Chains Sequence Length Organism Sequence
Antibody VRC42.01 Fab heavy chain A 228 Homo Sapiens , Synthetic Construct QVQLVQSGPEVKKPGSSLKVSCKASGGSFSTYTLSWVRQTPGQGLEWMGGIIPLLGLPNYAPKFQGRVTFSADTSTNTAYMEMSRLRFEDTAVYFCAREGAGWFGKPVGAMGYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
Antibody VRC42.01 Fab light chain B 213 Homo Sapiens , Synthetic Construct EIVLTQSPDTLSLSPGERASLSCRASQNVRNSNLAWYQHKPGQPPRLLIYGASSRASGIPGRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGGSFGTFGQGTKVEFRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC
Transmembrane protein gp41 C 19 Homo Sapiens , Synthetic Construct KKKNWFDITNWLWYIRKKK
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2025-12-02
Deposition Author(s): Cho, S.Y. , Wilson, I.A.