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9ZDU

Crystal structure of sars-cov-2 rbd in complex with human ab401 fab

PDB DOI: 10.2210/pdb9zdu/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2025-11-26
Deposition Author(s): Bjorkman, P.J. , Fan, C.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.6 Å

Literature

Crystal structure of sars-cov-2 rbd in complex with human ab401 fab

Bjorkman, P.J. , Fan, C.

Primary Citation of Related Structures: 9ZDU


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S1 A 212 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 RFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLHHHHHH
Ab401 Fab heavy chain H 241 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 EVQLVESGGGLVKPGGSLRLSCAASGFIFSSYTMNWVRQAPGKGPEWVSQISDSGSDMYYADSVKGRFSISRDNAKNSLYLRMNSLKVEDTAVYYCARVPRFYYDRSGTPIYEYYFDYWGQGILVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
Ab401 Fab light chain L 214 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QIVMMQSPATLSVSPGERATLSCRASQSVSGNLAWYQQNPGQAPRLLIYDASTRATGIPDRFSGSGSGTEFTLTISSLQSEDFAVYFCQQYNDWRQLTFGGGTKVEIETVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2025-11-26
Deposition Author(s): Bjorkman, P.J. , Fan, C.