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9ZBU

Visualization of pria/prib/dnat complexes reveals mechanisms governing structure-specific assembly of the dna replication restart primosome

PDB DOI: 10.2210/pdb9zbu/pdb

Classification: REPLICATION
Organism(s): Escherichia Coli K-12 , Synthetic Construct

Deposited: 2025-11-21
Deposition Author(s): Duckworth, A.T. , Grant, T. , Keck, J.L.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.6 Å

9zbu
Literature

Visualization of pria/prib/dnat complexes reveals mechanisms governing structure-specific assembly of the dna replication restart primosome

Duckworth, A.T. , Grant, T. , Keck, J.L.

Primary Citation of Related Structures: 9ZBU


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (36-MER) g 36 NA CCGCAGACTCATTTAGCCCTTATCCGTATTGCGGTC
DNA (33-MER) j 33 NA GACCGCAATACGGATAAGGGCTGAGCACGCCGA
DNA (11-MER) z 11 NA TCGGCGTGCTC

Proteins
Molecule Chains Sequence Length Organism Sequence
Replication restart protein PriB A 99 Escherichia Coli K-12 , Synthetic Construct TNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQAITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELI
Replication restart protein PriB B 99 Escherichia Coli K-12 , Synthetic Construct TNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQAITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELI
Replication restart protein DnaT C 154 Escherichia Coli K-12 , Synthetic Construct MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYAVTPARLAELLALEEKLARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFIRLAALWGVALREPVTTEELASFIAYWQAEGKVFHHVQWQQKLARSLQIGRAS
Replication restart protein DnaT D 154 Escherichia Coli K-12 , Synthetic Construct MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYAVTPARLAELLALEEKLARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFIRLAALWGVALREPVTTEELASFIAYWQAEGKVFHHVQWQQKLARSLQIGRAS
Replication restart protein DnaT E 154 Escherichia Coli K-12 , Synthetic Construct MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYAVTPARLAELLALEEKLARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFIRLAALWGVALREPVTTEELASFIAYWQAEGKVFHHVQWQQKLARSLQIGRAS
Replication restart protein DnaT T 154 Escherichia Coli K-12 , Synthetic Construct MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYAVTPARLAELLALEEKLARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFIRLAALWGVALREPVTTEELASFIAYWQAEGKVFHHVQWQQKLARSLQIGRAS
Replication restart protein DnaT W 154 Escherichia Coli K-12 , Synthetic Construct MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYAVTPARLAELLALEEKLARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFIRLAALWGVALREPVTTEELASFIAYWQAEGKVFHHVQWQQKLARSLQIGRAS
Replication restart protein DnaT X 154 Escherichia Coli K-12 , Synthetic Construct MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYAVTPARLAELLALEEKLARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFIRLAALWGVALREPVTTEELASFIAYWQAEGKVFHHVQWQQKLARSLQIGRAS
Replication restart protein DnaT Y 154 Escherichia Coli K-12 , Synthetic Construct MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYAVTPARLAELLALEEKLARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFIRLAALWGVALREPVTTEELASFIAYWQAEGKVFHHVQWQQKLARSLQIGRAS
Replication restart protein PriA H 731 Escherichia Coli K-12 , Synthetic Construct PVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIEG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-11-21
Deposition Author(s): Duckworth, A.T. , Grant, T. , Keck, J.L.