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FASTA Sequence PDB Format mmCIF Format
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9Z7V

Cryo-em structure of the type iii-bv crispr complex from dissulfurispira thermophila bound to target rna with complementary pfs

PDB DOI: 10.2210/pdb9z7v/pdb

Classification: IMMUNE SYSTEM/RNA
Organism(s): Dissulfurispira Thermophila , Escherichia Phage Ms2 , Synthetic Construct

Deposited: 2025-11-17
Deposition Author(s): Burman, N. , Pandey, S. , Wiedenheft, B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.0 Å

9z7v
Literature

Cryo-em structure of the type iii-bv crispr complex from dissulfurispira thermophila bound to target rna with complementary pfs

Burman, N. , Pandey, S. , Wiedenheft, B.

Primary Citation of Related Structures: 9Z7V


Proteins
Molecule Chains Sequence Length Organism Sequence
Type III-B CRISPR-associated protein Cas10/Cmr2 A 612 Dissulfurispira Thermophila , Escherichia Phage Ms2 , Synthetic Construct MGHHHHHHLEVLFQGPMENKFLFLFTITPVQSFINQARKAQDLYAGSFMLSHFSKAAANKLKMEFDCEIIFPDIANNSIPNRFAAVVNVNENEAQAVGDSLQKAVEAEIKRIGDSVINGLKINKPNGFDEQLSSYFTVSYLFVPYNEDDYKQCYSELESLMGAIKSVRAFSQYPDSERGRKCSICGERNVKFYRMAENEKDIERIKKLKLFSNDVYAVKNSDYRELGPRYLQAGEGLCGVCFTKRGLDRAGIPEYKAKFPSTSKIALFDAFKQLREKRGDLGTIIDSDNYEPQGIFALKNNKNLDDFPELSEMEKKNTRELYEAMEDYKISYSPYYAVMLFDGDSMGEWLSGNKIKDEKLKEFHKELTKKLGEFANAVRDTIKEPLGVTVYAGGEDFLGFFNIKYLLEGMKHLRNKFNELVNLPLKDFYADNTYNMTFSAGAVIAHIKTPLSEVLNWARKVEQEAKDIDDTKDAFAIAVLKHSGEIEKTVFKWRVNDTYTTDLMSKIVTEINNDRLSNTFIKKLNQELIKLLDKDGNYRDDNIIKAEIKRLLMRSFMKTKDEDEDAFKKRKAETAKELQLHNLLIHSNGVRNFLNFLNITDFIARQAKGGAA
Type III-B CRISPR module-associated protein Cmr3 B 360 Dissulfurispira Thermophila , Escherichia Phage Ms2 , Synthetic Construct MKRITINALDVLFLRDGKPFTMGSDTWGSGISLPYPSMIYGVLRSLYFSHNISMLKHAAPIDELNHNDPTRNLKIKGIYLKRASDLLFPVPMDCVVLKNSRDEKLIPLMPVKAQCISNCKTSAVLRPEKGEQIESAEDGWIDKAAMEEYLNGIYENMSYSKLSDFVLSEAKIGIARNNKTHIAEDSMLYRVGMKRLKDTTIVVDIDGLEIPDAGIIKIGGEGRPASFKAIDIDETSILQPAINSNKIEKIKLYIATPAIFKKGWLPQTIDDRDLEGEINGIGLKLITAAIGRPLYVGGFDIKKGPKPMKRAVPAGSVYYFEIHGQYSNEQIINALHDKAISDREQDRQQGFGIAYVGKWE
Type III-B CRISPR module RAMP protein Cmr4 C 315 Dissulfurispira Thermophila , Escherichia Phage Ms2 , Synthetic Construct MFKKARPFFIICETPLHCGSGNDIGNVDLPIQRERHTDFPKIEASSLKGGIREAFEEADKDIKVGSLTINISDKSTISLAFGPEQGSDHAGALGFTDARILLFPVKSMKGVFAWVTCPQVLERFKSDLNLCGVNLGFEMPQANTAPKDCSLFINGNKIVLEEYTFEIARDRDESGNCTSLANWLSENLFLANSGIQFWKEKIKKDIVVISDDEFRDFVTLSTEVITRTKINNETGTVQSGALFTEEYLPTDTVLYSLALTTPVFKEKDEEKGIFKQDSANEEDMVMEFFTTGLPEIIQLGGNATIGKGIARVKIL
Type III-B CRISPR module RAMP protein Cmr4 D 315 Dissulfurispira Thermophila , Escherichia Phage Ms2 , Synthetic Construct MFKKARPFFIICETPLHCGSGNDIGNVDLPIQRERHTDFPKIEASSLKGGIREAFEEADKDIKVGSLTINISDKSTISLAFGPEQGSDHAGALGFTDARILLFPVKSMKGVFAWVTCPQVLERFKSDLNLCGVNLGFEMPQANTAPKDCSLFINGNKIVLEEYTFEIARDRDESGNCTSLANWLSENLFLANSGIQFWKEKIKKDIVVISDDEFRDFVTLSTEVITRTKINNETGTVQSGALFTEEYLPTDTVLYSLALTTPVFKEKDEEKGIFKQDSANEEDMVMEFFTTGLPEIIQLGGNATIGKGIARVKIL
Type III-B CRISPR module RAMP protein Cmr4 E 315 Dissulfurispira Thermophila , Escherichia Phage Ms2 , Synthetic Construct MFKKARPFFIICETPLHCGSGNDIGNVDLPIQRERHTDFPKIEASSLKGGIREAFEEADKDIKVGSLTINISDKSTISLAFGPEQGSDHAGALGFTDARILLFPVKSMKGVFAWVTCPQVLERFKSDLNLCGVNLGFEMPQANTAPKDCSLFINGNKIVLEEYTFEIARDRDESGNCTSLANWLSENLFLANSGIQFWKEKIKKDIVVISDDEFRDFVTLSTEVITRTKINNETGTVQSGALFTEEYLPTDTVLYSLALTTPVFKEKDEEKGIFKQDSANEEDMVMEFFTTGLPEIIQLGGNATIGKGIARVKIL
CRISPR type III-B/RAMP module-associated protein Cmr5 F 140 Dissulfurispira Thermophila , Escherichia Phage Ms2 , Synthetic Construct MTDNNLTIQKSIERQRAAFAYKCAEAGKSITKSKEYKAYVKNIPMLIKTNGIGATFAFVKAKSEADVDKSGYAYKLIYEQTTEWLKQEPKGLIYEKLNNTDMVKALVELDSDKYRAVTNEVLALFVWLKRFAEGLIEGEK
CRISPR type III-B/RAMP module-associated protein Cmr5 G 140 Dissulfurispira Thermophila , Escherichia Phage Ms2 , Synthetic Construct MTDNNLTIQKSIERQRAAFAYKCAEAGKSITKSKEYKAYVKNIPMLIKTNGIGATFAFVKAKSEADVDKSGYAYKLIYEQTTEWLKQEPKGLIYEKLNNTDMVKALVELDSDKYRAVTNEVLALFVWLKRFAEGLIEGEK
CSD domain-containing protein Cmr6 H 376 Dissulfurispira Thermophila , Escherichia Phage Ms2 , Synthetic Construct MSEKGKIKTFKKAKGFGFIKYSGGEIFFHINDVIASDSDKIKEGIDVEFEIGKGKEGKPAAKKIKVKSLYRQQNIPINDDISGINYFLPKDTYAAVKPEQIDNFNLLLNKIPYFDGKKFNFYKKDKKRNEILNLARRFNYNASFIKRLSERHKNSISQLLGSGSITSTTLSPDWRFIIGIGNESVYETSITLHHIYGIPYIPGQAVKGVVRSWIITEVFGQDEKKALKDALFCHIFGSPKESAIGEHQGSVIFFDALPITLPQLEVDVMNPHYGDYYQGKEKSNKPVPPADYLNPNPIPFLTVGKDTKFEFTVGMKKLKQAREVLKNGSSRLISECEGLTAEKNLHEIAISWLKKALTEHGIGAKTAVGYGYFEKT
Cmr1-MntA I 438 Dissulfurispira Thermophila , Escherichia Phage Ms2 , Synthetic Construct MKTVGFTLTTITPMFLSGIDSRTPELRAPSIKGAMRFWWRALKAEPDIDKLRKKEDQIFGSSDEKIGRAKFSIRVSQIDKKSPSTYKNPDKYDPVGYHFYSVFMEGGRERYYSPEENRFKIILTSQDEGILKIASASLWALVYLGAIGTRARRGAGNMAIISVDDADKILDDTGLDFIPKGNNSEEVAKWIRDNCNTAKAIINKDKTTFVSEYSNLCFSRFVIGNQPFKSWKDALGAAGFKAFRDKNKSRILETPSFGFPVRHRTNNINNITVTGRVGKDSFSRRSSPIIFKIIKSGSYYYWMVLRLSGEFLPEGGVIKANNNTQKPDYSIIDEFWAELKKRGVEHILSMPDTLMTIIDKLKKDIDPQKIILFGSKARGDFHSRSDTDIAVETDKSLEELLLNGAVDIVDMNRANDELKDKIKKEGVVIYERKGEEAS

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (36-MER) j 36 NA UCUAACUUUACUCAGUUCGUUCUCGUCGACCUUUCU
RNA (38-MER) n 38 NA ACUGAAACGUCGACGAGAACGAACUGAGUAAAGUUAGA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-11-17
Deposition Author(s): Burman, N. , Pandey, S. , Wiedenheft, B.