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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9YXM

10-23 dnazyme in complex with t7 rna polymerase

PDB DOI: 10.2210/pdb9yxm/pdb

Classification: DNA
Organism(s): Escherichia Phage T7 , Synthetic Construct

Deposited: 2025-10-27
Deposition Author(s): Cooper, D.R. , Cramer, E.R. , Purdy, M.D. , Robart, A.R. , Shultz, H.L.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.62 Å

9yxm
Literature

10-23 dnazyme in complex with t7 rna polymerase

Cooper, D.R. , Cramer, E.R. , Purdy, M.D. , Robart, A.R. , Shultz, H.L.

Primary Citation of Related Structures: 9YXM


Proteins
Molecule Chains Sequence Length Organism Sequence
RNA polymerase A 889 Escherichia Phage T7 , Synthetic Construct MNTINIAKNDFSDIELAAIPFNTLADHYGERLAREQLALEHESYEMGEARFRKMFERQLKAGEVADNAAAKPLITTLLPKMIARINDWFEEVKAKRGKRPTAFQFLQEIKPEAVAYITIKTTLACLTSADNTTVQAVASAIGRAIEDEARFGRIRDLEAKHFKKNVEEQLNKRVGHVYKKAFMQVVEADMLSKGLLGGEAWSSWHKEDSIHVGVRCIEMLIESTGMVSLHRQNAGVVGQDSETIELAPEYAEAIATRAGALAGISPMFQPCVVPPKPWTGITGGGYWANGRRPLALVRTHSKKALMRYEDVYMPEVYKAINIAQNTAWKINKKVLAVANVITKWKHCPVEDIPAIEREELPMKPEDIDMNPEALTAWKRAAAAVYRKDKARKSRRISLEFMLEQANKFANHKAIWFPYNMDWRGRVYAVSMFNPQGNDMTKGLLTLAKGKPIGKEGYYWLKIHGANCAGVDKVPFPERIKFIEENHENIMACAKSPLENTWWAEQDSPFCFLAFCFEYAGVQHHGLSYNCSLPLAFDGSCSGIQHFSAMLRDEVGGRAVNLLPSETVQDIYGIVAKKVNEILQADAINGTDNEVVTVTDENTGEISEKVKLGTKALAGQWLAYGVTRSVTKRSVMTLAYGSKEFGFRQQVLEDTIQPAIDSGKGLMFTQPNQAAGYMAKLIWESVSVTVVAAVEAMNWLKSAAKLLAAEVKDKKTGEILRKRCAVHWVTPDGFPVWQEYKKPIQTRLNLMFLGQFRLQPTINTNKDSEIDAHKQESGIAPNFVHSQDGSHLRKTVVWAHEKYGIESFALIHDSFGTIPADAANLFKAVRETMVDTYESCDVLADFYDQFADQLHESQLDKMPALPAKGNLNLRDILESDFAFAHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (44-MER) b 44 NA TGGCGAAAGGCTAGCTACAACGAATTCTAATACGACTCACTATA
DNA/RNA (5'-D(P*TP*AP*GP*TP*GP*AP*GP*TP*CP*GP*TP*AP*TP*TP*AP*GP*AP*AP*T)-R(P*A)-D(P*TP*TP*T)-3') c 35 NA CTCCCTATAGTGAGTCGTATTAGAATATTTCGCCA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-10-27
Deposition Author(s): Cooper, D.R. , Cramer, E.R. , Purdy, M.D. , Robart, A.R. , Shultz, H.L.