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FASTA Sequence PDB Format mmCIF Format
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9YTD

Designed antibody vab66 targeting pap-hla a*02:01

PDB DOI: 10.2210/pdb9ytd/pdb

Classification: DE NOVO PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Lama Glama , Synthetic Construct , Synthetic Construct

Deposited: 2025-10-20
Deposition Author(s): Garcia, K.C. , Jude, K.M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.5 Å

9ytd
Literature

Designed antibody vab66 targeting pap-hla a*02:01

Garcia, K.C. , Jude, K.M.

Primary Citation of Related Structures: 9YTD


Proteins
Molecule Chains Sequence Length Organism Sequence
HLA class I histocompatibility antigen, A alpha chain A 279 Homo Sapiens , Lama Glama , Synthetic Construct , Synthetic Construct MGSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWEPSS
Beta-2-microglobulin B 100 Homo Sapiens , Lama Glama , Synthetic Construct , Synthetic Construct MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
Prostatic acid phosphatase-derived peptide C 9 Homo Sapiens , Lama Glama , Synthetic Construct , Synthetic Construct TLMSAMTNL
AD01 nanobody D 127 Homo Sapiens , Lama Glama , Synthetic Construct , Synthetic Construct EVKLVESGGGLVQPGGSLRLSCAASGSIFSINTMGWYRQTPGKQRDLVADISSGGSTKYGDSVKGRFTISRDNTKNTVYLQMNSLKPEDTAVYYCYGLSYSNDDYWGQGTQVTVSSGAPHHHHHHHH
vAB66 heavy chain H 218 Homo Sapiens , Lama Glama , Synthetic Construct , Synthetic Construct QVQLQESGPGLVKPSETLSLTCAVSNAKLTEYDWWGWIRQPPGKGLEWIGSGNAYGLVYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARYDGVVLYPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
vAB66 light chain L 217 Homo Sapiens , Lama Glama , Synthetic Construct , Synthetic Construct DIQMTQSPSSLSASVGDRVTITCRASADPQGFLNWYQQKPGKAPKLLIYLASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSWSERGPYLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-10-20
Deposition Author(s): Garcia, K.C. , Jude, K.M.