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FASTA Sequence PDB Format mmCIF Format
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9YSJ

Sars-cov-2 ba.3.2.1 spike, 3-rbd-down

PDB DOI: 10.2210/pdb9ysj/pdb

Classification: VIRAL PROTEIN
Organism(s): Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2025-10-18
Deposition Author(s): Chen, Z. , Hu, Y. , Liang, B. , Wang, Y. , Xie, X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.62 Å

9ysj
Literature

Sars-cov-2 ba.3.2.1 spike, 3-rbd-down

Chen, Z. , Hu, Y. , Liang, B. , Wang, Y. , Xie, X.

Primary Citation of Related Structures: 9YSJ


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike glycoprotein A 1271 Severe Acute Respiratory Syndrome Coronavirus 2 MFVFLVLLLLVSSQCVNLTTTTQLPLAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHVISGTNGTKRFDNPVLPFNDGVYFASIEKSNITRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFNNKSWMESESRVYSSAKNCTFEYVFQPFLMDLEGKQGNFTNLREFVFKNIDGYFKIYSKHTPIIVRDLPQGFSALEPLVDLPIGINITRFQTLLHRSYLTSGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESVVRFPNITNLCPFYEVFNATRFPSVYAWNRKRISNCVADYSVLYNFAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIKGNEVSQIAPGQTGNIADYNYKLPDDFTGCVISWNSNRLDSKADGNYNYWYRLFRKSKLKPFERDISTEIYQAGNNPCNGVKGFNCYFPLQSYSFRPTYGVGYQPYRVVVLSFELLHAPATVCGPKNSTNLVKNKCVNFNFNGLTGTGVLTDSNKKFLPFQQFGRDIADTTDAVRDPQTLDILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIRADQLTPTWRVYSTGSKGFQTRAGCLIGAKYVNNSYECDIPIGAGICASYQTQTRSRGSASSVDSQSIIAYTMSLGAENLVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPITYFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICKQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLFSTPSALGKLQDVVNHNAQALNTLVKQLSSKFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSRDVDLGDISGINASVVNIQKEIERLNEVAKNLNESLIDLQELGKYEQGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGRSLEVLFQGPGHHHHHHHHSAWSHPQFEKGGGSGGGGSGGSAWSHPQFEK
Spike glycoprotein B 1271 Severe Acute Respiratory Syndrome Coronavirus 2 MFVFLVLLLLVSSQCVNLTTTTQLPLAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHVISGTNGTKRFDNPVLPFNDGVYFASIEKSNITRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFNNKSWMESESRVYSSAKNCTFEYVFQPFLMDLEGKQGNFTNLREFVFKNIDGYFKIYSKHTPIIVRDLPQGFSALEPLVDLPIGINITRFQTLLHRSYLTSGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESVVRFPNITNLCPFYEVFNATRFPSVYAWNRKRISNCVADYSVLYNFAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIKGNEVSQIAPGQTGNIADYNYKLPDDFTGCVISWNSNRLDSKADGNYNYWYRLFRKSKLKPFERDISTEIYQAGNNPCNGVKGFNCYFPLQSYSFRPTYGVGYQPYRVVVLSFELLHAPATVCGPKNSTNLVKNKCVNFNFNGLTGTGVLTDSNKKFLPFQQFGRDIADTTDAVRDPQTLDILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIRADQLTPTWRVYSTGSKGFQTRAGCLIGAKYVNNSYECDIPIGAGICASYQTQTRSRGSASSVDSQSIIAYTMSLGAENLVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPITYFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICKQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLFSTPSALGKLQDVVNHNAQALNTLVKQLSSKFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSRDVDLGDISGINASVVNIQKEIERLNEVAKNLNESLIDLQELGKYEQGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGRSLEVLFQGPGHHHHHHHHSAWSHPQFEKGGGSGGGGSGGSAWSHPQFEK
Spike glycoprotein C 1271 Severe Acute Respiratory Syndrome Coronavirus 2 MFVFLVLLLLVSSQCVNLTTTTQLPLAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHVISGTNGTKRFDNPVLPFNDGVYFASIEKSNITRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFNNKSWMESESRVYSSAKNCTFEYVFQPFLMDLEGKQGNFTNLREFVFKNIDGYFKIYSKHTPIIVRDLPQGFSALEPLVDLPIGINITRFQTLLHRSYLTSGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESVVRFPNITNLCPFYEVFNATRFPSVYAWNRKRISNCVADYSVLYNFAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIKGNEVSQIAPGQTGNIADYNYKLPDDFTGCVISWNSNRLDSKADGNYNYWYRLFRKSKLKPFERDISTEIYQAGNNPCNGVKGFNCYFPLQSYSFRPTYGVGYQPYRVVVLSFELLHAPATVCGPKNSTNLVKNKCVNFNFNGLTGTGVLTDSNKKFLPFQQFGRDIADTTDAVRDPQTLDILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIRADQLTPTWRVYSTGSKGFQTRAGCLIGAKYVNNSYECDIPIGAGICASYQTQTRSRGSASSVDSQSIIAYTMSLGAENLVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPITYFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICKQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLFSTPSALGKLQDVVNHNAQALNTLVKQLSSKFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSRDVDLGDISGINASVVNIQKEIERLNEVAKNLNESLIDLQELGKYEQGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGRSLEVLFQGPGHHHHHHHHSAWSHPQFEKGGGSGGGGSGGSAWSHPQFEK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-10-18
Deposition Author(s): Chen, Z. , Hu, Y. , Liang, B. , Wang, Y. , Xie, X.