9YFD
Defense-associated reverse transcriptase 1 (drt1) filament
PDB DOI: 10.2210/pdb9yfd/pdb
Classification: ANTIVIRAL PROTEIN Organism(s): Escherichia Coli
Deposited: 2025-09-25 Deposition Author(s): Johnson, N.V. , Mclellan, J.S.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.6 Å
Defense-associated reverse transcriptase 1 (drt1) filament
Johnson, N.V. , Mclellan, J.S.
Primary Citation of Related Structures: 9YFD
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Defense-associated reverse transcriptase 1 | A | 1229 | Escherichia Coli | MKLLNKKYYNLEPNFDYLKDSFILGLAWKKTDRFVRTHNWYADLLALDKCAFDISDEVTSWSSEAVNRNLSKSDIELIPAPKRASWFFNKGKWTTNKDDRKLRPLANISIKDQSFATAVTMCLADAIETRQKDCSLRNLGYAEHVNKKVVSYGNRLVCDWDNERARFRWGGSEYYRKFSTDYRNFLQRPVYIGRETVNKISEIDDVYIISLDLKNFFGSIKISTLLEKLKKISSDHYDHNIINENEFWGLASQILNWEWPEDSLSLLKNLDIEEENVGLPQGLASAGALANAYLIEFDESLTSNLRTKIDGSQIVLHDYCRYVDDIRLVISGEALTNEEIKKSIHELVQRILDETLDQDESDNEPYLKINDKKTYILGLSDIDNGSSLTNRINEIQNEVGTSSIPERNGLDNNIPALQQLLLTEQDNFLEDADGLFSGFNNDKSIKLESLRRFSAHRLETSLANKSKLISPAERKQFDNESALIAKKLLKTWLKDPSIMVIFRKAITINPNLDAYKTILEIIFLRIQHNREKCDRYIMLYLLSDIFRSVVDIYRKLSPECTSDYQKLMSEVTSFAHKLLSCRSVIPNYAYQQALFYLAVINKPFIASKKSSSDLSKLQHVLIKRHLEPLSSSDGYLFELSAQISKDYQANVAFLLSHTNTTEVVDSIVEKFAYRGGEFWNSIWKEFVRTKDKVRINKFRWAIPKNESKPNGSDHYLSSVISFKENPFKYEHALLKLGIALVNLLEDTEKNVWQSDGKQYSPHEIKVKLEGHSTSWTELWRQNSIISCSIDKIAQDPRYESPKWLVNCQQAKNDEKKIYWVCSVLRSAALGNVDYTQRNDLKPDRVEYDGIHSQFYKRRMGMLHTPESIVGSYATITDWFASFLQHGLQWPGFSSSYINQEDILSITSLGEFKKCLLERLGYLNTQICTSSSVPTLPTVVNRPELASNYFRIVTVQQLFPKDKHFHPSDVTLDNPEVRWKHREHLAEICKLTEQTLDAKLKTESRDHTSTADLIVFSELAVHPEDEDIVRALAFRTRSIIFCGFVFCEQDGQIVNKARWIIPDSSESGTQWRVRDQGKFHMTSGEMSLGVHGYRPSQHIISIEGHTEGPFKLTGAICYDATDIKLAADLRDLTDMFVIAAYNKDVDTFDNMASALQWHMYQHVIITNTGEYGGSTMQAPYKEKHHKLISHAHGTGQIAISTADIDLAAFRRKIKEYKKTKTQPAGFKRKH |
| Defense-associated reverse transcriptase 1 | B | 1229 | Escherichia Coli | MKLLNKKYYNLEPNFDYLKDSFILGLAWKKTDRFVRTHNWYADLLALDKCAFDISDEVTSWSSEAVNRNLSKSDIELIPAPKRASWFFNKGKWTTNKDDRKLRPLANISIKDQSFATAVTMCLADAIETRQKDCSLRNLGYAEHVNKKVVSYGNRLVCDWDNERARFRWGGSEYYRKFSTDYRNFLQRPVYIGRETVNKISEIDDVYIISLDLKNFFGSIKISTLLEKLKKISSDHYDHNIINENEFWGLASQILNWEWPEDSLSLLKNLDIEEENVGLPQGLASAGALANAYLIEFDESLTSNLRTKIDGSQIVLHDYCRYVDDIRLVISGEALTNEEIKKSIHELVQRILDETLDQDESDNEPYLKINDKKTYILGLSDIDNGSSLTNRINEIQNEVGTSSIPERNGLDNNIPALQQLLLTEQDNFLEDADGLFSGFNNDKSIKLESLRRFSAHRLETSLANKSKLISPAERKQFDNESALIAKKLLKTWLKDPSIMVIFRKAITINPNLDAYKTILEIIFLRIQHNREKCDRYIMLYLLSDIFRSVVDIYRKLSPECTSDYQKLMSEVTSFAHKLLSCRSVIPNYAYQQALFYLAVINKPFIASKKSSSDLSKLQHVLIKRHLEPLSSSDGYLFELSAQISKDYQANVAFLLSHTNTTEVVDSIVEKFAYRGGEFWNSIWKEFVRTKDKVRINKFRWAIPKNESKPNGSDHYLSSVISFKENPFKYEHALLKLGIALVNLLEDTEKNVWQSDGKQYSPHEIKVKLEGHSTSWTELWRQNSIISCSIDKIAQDPRYESPKWLVNCQQAKNDEKKIYWVCSVLRSAALGNVDYTQRNDLKPDRVEYDGIHSQFYKRRMGMLHTPESIVGSYATITDWFASFLQHGLQWPGFSSSYINQEDILSITSLGEFKKCLLERLGYLNTQICTSSSVPTLPTVVNRPELASNYFRIVTVQQLFPKDKHFHPSDVTLDNPEVRWKHREHLAEICKLTEQTLDAKLKTESRDHTSTADLIVFSELAVHPEDEDIVRALAFRTRSIIFCGFVFCEQDGQIVNKARWIIPDSSESGTQWRVRDQGKFHMTSGEMSLGVHGYRPSQHIISIEGHTEGPFKLTGAICYDATDIKLAADLRDLTDMFVIAAYNKDVDTFDNMASALQWHMYQHVIITNTGEYGGSTMQAPYKEKHHKLISHAHGTGQIAISTADIDLAAFRRKIKEYKKTKTQPAGFKRKH |
| Defense-associated reverse transcriptase 1 | C | 1229 | Escherichia Coli | MKLLNKKYYNLEPNFDYLKDSFILGLAWKKTDRFVRTHNWYADLLALDKCAFDISDEVTSWSSEAVNRNLSKSDIELIPAPKRASWFFNKGKWTTNKDDRKLRPLANISIKDQSFATAVTMCLADAIETRQKDCSLRNLGYAEHVNKKVVSYGNRLVCDWDNERARFRWGGSEYYRKFSTDYRNFLQRPVYIGRETVNKISEIDDVYIISLDLKNFFGSIKISTLLEKLKKISSDHYDHNIINENEFWGLASQILNWEWPEDSLSLLKNLDIEEENVGLPQGLASAGALANAYLIEFDESLTSNLRTKIDGSQIVLHDYCRYVDDIRLVISGEALTNEEIKKSIHELVQRILDETLDQDESDNEPYLKINDKKTYILGLSDIDNGSSLTNRINEIQNEVGTSSIPERNGLDNNIPALQQLLLTEQDNFLEDADGLFSGFNNDKSIKLESLRRFSAHRLETSLANKSKLISPAERKQFDNESALIAKKLLKTWLKDPSIMVIFRKAITINPNLDAYKTILEIIFLRIQHNREKCDRYIMLYLLSDIFRSVVDIYRKLSPECTSDYQKLMSEVTSFAHKLLSCRSVIPNYAYQQALFYLAVINKPFIASKKSSSDLSKLQHVLIKRHLEPLSSSDGYLFELSAQISKDYQANVAFLLSHTNTTEVVDSIVEKFAYRGGEFWNSIWKEFVRTKDKVRINKFRWAIPKNESKPNGSDHYLSSVISFKENPFKYEHALLKLGIALVNLLEDTEKNVWQSDGKQYSPHEIKVKLEGHSTSWTELWRQNSIISCSIDKIAQDPRYESPKWLVNCQQAKNDEKKIYWVCSVLRSAALGNVDYTQRNDLKPDRVEYDGIHSQFYKRRMGMLHTPESIVGSYATITDWFASFLQHGLQWPGFSSSYINQEDILSITSLGEFKKCLLERLGYLNTQICTSSSVPTLPTVVNRPELASNYFRIVTVQQLFPKDKHFHPSDVTLDNPEVRWKHREHLAEICKLTEQTLDAKLKTESRDHTSTADLIVFSELAVHPEDEDIVRALAFRTRSIIFCGFVFCEQDGQIVNKARWIIPDSSESGTQWRVRDQGKFHMTSGEMSLGVHGYRPSQHIISIEGHTEGPFKLTGAICYDATDIKLAADLRDLTDMFVIAAYNKDVDTFDNMASALQWHMYQHVIITNTGEYGGSTMQAPYKEKHHKLISHAHGTGQIAISTADIDLAAFRRKIKEYKKTKTQPAGFKRKH |
| Defense-associated reverse transcriptase 1 | D | 1229 | Escherichia Coli | MKLLNKKYYNLEPNFDYLKDSFILGLAWKKTDRFVRTHNWYADLLALDKCAFDISDEVTSWSSEAVNRNLSKSDIELIPAPKRASWFFNKGKWTTNKDDRKLRPLANISIKDQSFATAVTMCLADAIETRQKDCSLRNLGYAEHVNKKVVSYGNRLVCDWDNERARFRWGGSEYYRKFSTDYRNFLQRPVYIGRETVNKISEIDDVYIISLDLKNFFGSIKISTLLEKLKKISSDHYDHNIINENEFWGLASQILNWEWPEDSLSLLKNLDIEEENVGLPQGLASAGALANAYLIEFDESLTSNLRTKIDGSQIVLHDYCRYVDDIRLVISGEALTNEEIKKSIHELVQRILDETLDQDESDNEPYLKINDKKTYILGLSDIDNGSSLTNRINEIQNEVGTSSIPERNGLDNNIPALQQLLLTEQDNFLEDADGLFSGFNNDKSIKLESLRRFSAHRLETSLANKSKLISPAERKQFDNESALIAKKLLKTWLKDPSIMVIFRKAITINPNLDAYKTILEIIFLRIQHNREKCDRYIMLYLLSDIFRSVVDIYRKLSPECTSDYQKLMSEVTSFAHKLLSCRSVIPNYAYQQALFYLAVINKPFIASKKSSSDLSKLQHVLIKRHLEPLSSSDGYLFELSAQISKDYQANVAFLLSHTNTTEVVDSIVEKFAYRGGEFWNSIWKEFVRTKDKVRINKFRWAIPKNESKPNGSDHYLSSVISFKENPFKYEHALLKLGIALVNLLEDTEKNVWQSDGKQYSPHEIKVKLEGHSTSWTELWRQNSIISCSIDKIAQDPRYESPKWLVNCQQAKNDEKKIYWVCSVLRSAALGNVDYTQRNDLKPDRVEYDGIHSQFYKRRMGMLHTPESIVGSYATITDWFASFLQHGLQWPGFSSSYINQEDILSITSLGEFKKCLLERLGYLNTQICTSSSVPTLPTVVNRPELASNYFRIVTVQQLFPKDKHFHPSDVTLDNPEVRWKHREHLAEICKLTEQTLDAKLKTESRDHTSTADLIVFSELAVHPEDEDIVRALAFRTRSIIFCGFVFCEQDGQIVNKARWIIPDSSESGTQWRVRDQGKFHMTSGEMSLGVHGYRPSQHIISIEGHTEGPFKLTGAICYDATDIKLAADLRDLTDMFVIAAYNKDVDTFDNMASALQWHMYQHVIITNTGEYGGSTMQAPYKEKHHKLISHAHGTGQIAISTADIDLAAFRRKIKEYKKTKTQPAGFKRKH |
| Defense-associated reverse transcriptase 1 | E | 1229 | Escherichia Coli | MKLLNKKYYNLEPNFDYLKDSFILGLAWKKTDRFVRTHNWYADLLALDKCAFDISDEVTSWSSEAVNRNLSKSDIELIPAPKRASWFFNKGKWTTNKDDRKLRPLANISIKDQSFATAVTMCLADAIETRQKDCSLRNLGYAEHVNKKVVSYGNRLVCDWDNERARFRWGGSEYYRKFSTDYRNFLQRPVYIGRETVNKISEIDDVYIISLDLKNFFGSIKISTLLEKLKKISSDHYDHNIINENEFWGLASQILNWEWPEDSLSLLKNLDIEEENVGLPQGLASAGALANAYLIEFDESLTSNLRTKIDGSQIVLHDYCRYVDDIRLVISGEALTNEEIKKSIHELVQRILDETLDQDESDNEPYLKINDKKTYILGLSDIDNGSSLTNRINEIQNEVGTSSIPERNGLDNNIPALQQLLLTEQDNFLEDADGLFSGFNNDKSIKLESLRRFSAHRLETSLANKSKLISPAERKQFDNESALIAKKLLKTWLKDPSIMVIFRKAITINPNLDAYKTILEIIFLRIQHNREKCDRYIMLYLLSDIFRSVVDIYRKLSPECTSDYQKLMSEVTSFAHKLLSCRSVIPNYAYQQALFYLAVINKPFIASKKSSSDLSKLQHVLIKRHLEPLSSSDGYLFELSAQISKDYQANVAFLLSHTNTTEVVDSIVEKFAYRGGEFWNSIWKEFVRTKDKVRINKFRWAIPKNESKPNGSDHYLSSVISFKENPFKYEHALLKLGIALVNLLEDTEKNVWQSDGKQYSPHEIKVKLEGHSTSWTELWRQNSIISCSIDKIAQDPRYESPKWLVNCQQAKNDEKKIYWVCSVLRSAALGNVDYTQRNDLKPDRVEYDGIHSQFYKRRMGMLHTPESIVGSYATITDWFASFLQHGLQWPGFSSSYINQEDILSITSLGEFKKCLLERLGYLNTQICTSSSVPTLPTVVNRPELASNYFRIVTVQQLFPKDKHFHPSDVTLDNPEVRWKHREHLAEICKLTEQTLDAKLKTESRDHTSTADLIVFSELAVHPEDEDIVRALAFRTRSIIFCGFVFCEQDGQIVNKARWIIPDSSESGTQWRVRDQGKFHMTSGEMSLGVHGYRPSQHIISIEGHTEGPFKLTGAICYDATDIKLAADLRDLTDMFVIAAYNKDVDTFDNMASALQWHMYQHVIITNTGEYGGSTMQAPYKEKHHKLISHAHGTGQIAISTADIDLAAFRRKIKEYKKTKTQPAGFKRKH |
| Defense-associated reverse transcriptase 1 | F | 1229 | Escherichia Coli | MKLLNKKYYNLEPNFDYLKDSFILGLAWKKTDRFVRTHNWYADLLALDKCAFDISDEVTSWSSEAVNRNLSKSDIELIPAPKRASWFFNKGKWTTNKDDRKLRPLANISIKDQSFATAVTMCLADAIETRQKDCSLRNLGYAEHVNKKVVSYGNRLVCDWDNERARFRWGGSEYYRKFSTDYRNFLQRPVYIGRETVNKISEIDDVYIISLDLKNFFGSIKISTLLEKLKKISSDHYDHNIINENEFWGLASQILNWEWPEDSLSLLKNLDIEEENVGLPQGLASAGALANAYLIEFDESLTSNLRTKIDGSQIVLHDYCRYVDDIRLVISGEALTNEEIKKSIHELVQRILDETLDQDESDNEPYLKINDKKTYILGLSDIDNGSSLTNRINEIQNEVGTSSIPERNGLDNNIPALQQLLLTEQDNFLEDADGLFSGFNNDKSIKLESLRRFSAHRLETSLANKSKLISPAERKQFDNESALIAKKLLKTWLKDPSIMVIFRKAITINPNLDAYKTILEIIFLRIQHNREKCDRYIMLYLLSDIFRSVVDIYRKLSPECTSDYQKLMSEVTSFAHKLLSCRSVIPNYAYQQALFYLAVINKPFIASKKSSSDLSKLQHVLIKRHLEPLSSSDGYLFELSAQISKDYQANVAFLLSHTNTTEVVDSIVEKFAYRGGEFWNSIWKEFVRTKDKVRINKFRWAIPKNESKPNGSDHYLSSVISFKENPFKYEHALLKLGIALVNLLEDTEKNVWQSDGKQYSPHEIKVKLEGHSTSWTELWRQNSIISCSIDKIAQDPRYESPKWLVNCQQAKNDEKKIYWVCSVLRSAALGNVDYTQRNDLKPDRVEYDGIHSQFYKRRMGMLHTPESIVGSYATITDWFASFLQHGLQWPGFSSSYINQEDILSITSLGEFKKCLLERLGYLNTQICTSSSVPTLPTVVNRPELASNYFRIVTVQQLFPKDKHFHPSDVTLDNPEVRWKHREHLAEICKLTEQTLDAKLKTESRDHTSTADLIVFSELAVHPEDEDIVRALAFRTRSIIFCGFVFCEQDGQIVNKARWIIPDSSESGTQWRVRDQGKFHMTSGEMSLGVHGYRPSQHIISIEGHTEGPFKLTGAICYDATDIKLAADLRDLTDMFVIAAYNKDVDTFDNMASALQWHMYQHVIITNTGEYGGSTMQAPYKEKHHKLISHAHGTGQIAISTADIDLAAFRRKIKEYKKTKTQPAGFKRKH |
| Defense-associated reverse transcriptase 1 | G | 1229 | Escherichia Coli | MKLLNKKYYNLEPNFDYLKDSFILGLAWKKTDRFVRTHNWYADLLALDKCAFDISDEVTSWSSEAVNRNLSKSDIELIPAPKRASWFFNKGKWTTNKDDRKLRPLANISIKDQSFATAVTMCLADAIETRQKDCSLRNLGYAEHVNKKVVSYGNRLVCDWDNERARFRWGGSEYYRKFSTDYRNFLQRPVYIGRETVNKISEIDDVYIISLDLKNFFGSIKISTLLEKLKKISSDHYDHNIINENEFWGLASQILNWEWPEDSLSLLKNLDIEEENVGLPQGLASAGALANAYLIEFDESLTSNLRTKIDGSQIVLHDYCRYVDDIRLVISGEALTNEEIKKSIHELVQRILDETLDQDESDNEPYLKINDKKTYILGLSDIDNGSSLTNRINEIQNEVGTSSIPERNGLDNNIPALQQLLLTEQDNFLEDADGLFSGFNNDKSIKLESLRRFSAHRLETSLANKSKLISPAERKQFDNESALIAKKLLKTWLKDPSIMVIFRKAITINPNLDAYKTILEIIFLRIQHNREKCDRYIMLYLLSDIFRSVVDIYRKLSPECTSDYQKLMSEVTSFAHKLLSCRSVIPNYAYQQALFYLAVINKPFIASKKSSSDLSKLQHVLIKRHLEPLSSSDGYLFELSAQISKDYQANVAFLLSHTNTTEVVDSIVEKFAYRGGEFWNSIWKEFVRTKDKVRINKFRWAIPKNESKPNGSDHYLSSVISFKENPFKYEHALLKLGIALVNLLEDTEKNVWQSDGKQYSPHEIKVKLEGHSTSWTELWRQNSIISCSIDKIAQDPRYESPKWLVNCQQAKNDEKKIYWVCSVLRSAALGNVDYTQRNDLKPDRVEYDGIHSQFYKRRMGMLHTPESIVGSYATITDWFASFLQHGLQWPGFSSSYINQEDILSITSLGEFKKCLLERLGYLNTQICTSSSVPTLPTVVNRPELASNYFRIVTVQQLFPKDKHFHPSDVTLDNPEVRWKHREHLAEICKLTEQTLDAKLKTESRDHTSTADLIVFSELAVHPEDEDIVRALAFRTRSIIFCGFVFCEQDGQIVNKARWIIPDSSESGTQWRVRDQGKFHMTSGEMSLGVHGYRPSQHIISIEGHTEGPFKLTGAICYDATDIKLAADLRDLTDMFVIAAYNKDVDTFDNMASALQWHMYQHVIITNTGEYGGSTMQAPYKEKHHKLISHAHGTGQIAISTADIDLAAFRRKIKEYKKTKTQPAGFKRKH |
| Defense-associated reverse transcriptase 1 | H | 1229 | Escherichia Coli | MKLLNKKYYNLEPNFDYLKDSFILGLAWKKTDRFVRTHNWYADLLALDKCAFDISDEVTSWSSEAVNRNLSKSDIELIPAPKRASWFFNKGKWTTNKDDRKLRPLANISIKDQSFATAVTMCLADAIETRQKDCSLRNLGYAEHVNKKVVSYGNRLVCDWDNERARFRWGGSEYYRKFSTDYRNFLQRPVYIGRETVNKISEIDDVYIISLDLKNFFGSIKISTLLEKLKKISSDHYDHNIINENEFWGLASQILNWEWPEDSLSLLKNLDIEEENVGLPQGLASAGALANAYLIEFDESLTSNLRTKIDGSQIVLHDYCRYVDDIRLVISGEALTNEEIKKSIHELVQRILDETLDQDESDNEPYLKINDKKTYILGLSDIDNGSSLTNRINEIQNEVGTSSIPERNGLDNNIPALQQLLLTEQDNFLEDADGLFSGFNNDKSIKLESLRRFSAHRLETSLANKSKLISPAERKQFDNESALIAKKLLKTWLKDPSIMVIFRKAITINPNLDAYKTILEIIFLRIQHNREKCDRYIMLYLLSDIFRSVVDIYRKLSPECTSDYQKLMSEVTSFAHKLLSCRSVIPNYAYQQALFYLAVINKPFIASKKSSSDLSKLQHVLIKRHLEPLSSSDGYLFELSAQISKDYQANVAFLLSHTNTTEVVDSIVEKFAYRGGEFWNSIWKEFVRTKDKVRINKFRWAIPKNESKPNGSDHYLSSVISFKENPFKYEHALLKLGIALVNLLEDTEKNVWQSDGKQYSPHEIKVKLEGHSTSWTELWRQNSIISCSIDKIAQDPRYESPKWLVNCQQAKNDEKKIYWVCSVLRSAALGNVDYTQRNDLKPDRVEYDGIHSQFYKRRMGMLHTPESIVGSYATITDWFASFLQHGLQWPGFSSSYINQEDILSITSLGEFKKCLLERLGYLNTQICTSSSVPTLPTVVNRPELASNYFRIVTVQQLFPKDKHFHPSDVTLDNPEVRWKHREHLAEICKLTEQTLDAKLKTESRDHTSTADLIVFSELAVHPEDEDIVRALAFRTRSIIFCGFVFCEQDGQIVNKARWIIPDSSESGTQWRVRDQGKFHMTSGEMSLGVHGYRPSQHIISIEGHTEGPFKLTGAICYDATDIKLAADLRDLTDMFVIAAYNKDVDTFDNMASALQWHMYQHVIITNTGEYGGSTMQAPYKEKHHKLISHAHGTGQIAISTADIDLAAFRRKIKEYKKTKTQPAGFKRKH |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2025-09-25 Deposition Author(s): Johnson, N.V. , Mclellan, J.S.