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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9XPS

The neck structure of the phage phikz

PDB DOI: 10.2210/pdb9xps/pdb

Classification: VIRAL PROTEIN
Organism(s): Pseudomonas Phage Phikz

Deposited: 2025-11-17
Deposition Author(s): Liu, H. , Peng, Z. , Xiao, H. , Zhou, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.52 Å

Literature

The neck structure of the phage phikz

Liu, H. , Peng, Z. , Xiao, H. , Zhou, J.

Primary Citation of Related Structures: 9XPS


Proteins
Molecule Chains Sequence Length Organism Sequence
PHIKZ099 A 469 Pseudomonas Phage Phikz MALLTIEDEELPVNPEVKPVNPKECPDVFRGIAVDTKYVPRSDLMAWITGSNWRVDYFSQILREDQEPTALDIHRRPDKQQYIAIKGMDLKVTQALQYNQAENTTKFKVDGTGFTYPFLVPQKNDMFIADVGDGRSGLFTITSVRRQTILRDSTYAVTWKMIHYVTQQEYDDLITKSQMSYYYSSTSLMNGCGPFVTEQEQEDNTNLTKLYKEIIRNYITEFYSPQHQTFLVPDQLTKTYDHFAVKAFLQMVDASADPRMYKIKLLNVFSEPVMSQPTVWDAIVRQDVARMCYATEKAHLVTTKISRWKPVFQAIGFTGIARMVFPIDAPIDVESRYDGETMCRPDGQPFREGRPMREAPGPYRTQAERNLPWFKRIDPQYEDRVKPWQIPADIYPIVRDNYYVFTEAFYRGDKKLMSKLELCVWAMINGEAVNADQLREVAKCSRSWDNLERYYYHIVLLSLIKYSLR
PHIKZ099 B 469 Pseudomonas Phage Phikz MALLTIEDEELPVNPEVKPVNPKECPDVFRGIAVDTKYVPRSDLMAWITGSNWRVDYFSQILREDQEPTALDIHRRPDKQQYIAIKGMDLKVTQALQYNQAENTTKFKVDGTGFTYPFLVPQKNDMFIADVGDGRSGLFTITSVRRQTILRDSTYAVTWKMIHYVTQQEYDDLITKSQMSYYYSSTSLMNGCGPFVTEQEQEDNTNLTKLYKEIIRNYITEFYSPQHQTFLVPDQLTKTYDHFAVKAFLQMVDASADPRMYKIKLLNVFSEPVMSQPTVWDAIVRQDVARMCYATEKAHLVTTKISRWKPVFQAIGFTGIARMVFPIDAPIDVESRYDGETMCRPDGQPFREGRPMREAPGPYRTQAERNLPWFKRIDPQYEDRVKPWQIPADIYPIVRDNYYVFTEAFYRGDKKLMSKLELCVWAMINGEAVNADQLREVAKCSRSWDNLERYYYHIVLLSLIKYSLR
PHIKZ029 X 695 Pseudomonas Phage Phikz MAYYNAVPRVVFNGIRDRSRRPLIRPDITFAQHCPLLRLFTETGPTETTYVGDSDDGFASIYGQASLDPRSKFFNTQSLLALNLLGRGNGFYVKRLRPEDAANPSRLIVAIEIVEDEIPLTIRRLSGFNYPNSVRDIGNAPVPTTDKVDGLKARIILIEDNTSEVGTQRVLPGTLVSDKDGSQSLVYPLFEAPVSFFGKLGDSNGMRVWSTTTADIEEFDEAAMAKFKTRQFRIQLIEKPEVGTSPVIVKTADQQDYLNITFDKGVYSDMYNADLYVGDVLVDSYSDDGVVSGLSPLYSPFSQFYVYHENIDLVRQMIYDTEMRVNPAAAAHTTAPGEIDFLTFLAVDGDPYQGIQVLGPLDGGITLGKDGNIYASGGTDGTTDLEEYAKLVDIENINFGKLNDRYNNIAEYQFGVLYDTGLPMESKYRAMRVLSARRDLQYFFTTFVETDSRLPDEATELSRVQQIITRLKAFPESTLYGTGVCRAMIVMQSGKLMDGTYRKYVPQLLDVAMSWARYAGAGTGNLVPGMEMDVSPNNRVTFVKDLNVKFFDDRVRAQAWANGATWSQSYDHRSSYYPCLRSVMLDDTSVLLSPITVNICCVLIRLIHKVHAQFSGNATLTPEQLVERCDEYILDLVRDMFGTRVNIIPRTEITPIDANNGTSWTCNVTVEANNPRTTLNFNLETVRIETPPAQQ
PHIKZ030 Y 293 Pseudomonas Phage Phikz MARYNDPMAPETGYGAGGARNTVNLAQAGTNVFRPDLANLATNTPYVARNLVPFLLDAPRFFKYASNTNWLVACLKAFVETHTRTIDGLQRTLTVDNAEAPWGGSGEVIQTATNVTRARSNPNFGCWELQNRAIQRFLQWWINYGIADENTKVPRIVSDGIVPVEKYDATFYGMTVLFVEPDPTFQDCVNAYLCTNMFPLTTGPWENRKDASQIGQNLDLNVEFSALTDVSEGVQEYARQMFRKLNIRGMNPNNQKLDWGGLSADVLRARNGIQDQIERAVGNRVTYDGVGLS
PHIKZ030 Z 293 Pseudomonas Phage Phikz MARYNDPMAPETGYGAGGARNTVNLAQAGTNVFRPDLANLATNTPYVARNLVPFLLDAPRFFKYASNTNWLVACLKAFVETHTRTIDGLQRTLTVDNAEAPWGGSGEVIQTATNVTRARSNPNFGCWELQNRAIQRFLQWWINYGIADENTKVPRIVSDGIVPVEKYDATFYGMTVLFVEPDPTFQDCVNAYLCTNMFPLTTGPWENRKDASQIGQNLDLNVEFSALTDVSEGVQEYARQMFRKLNIRGMNPNNQKLDWGGLSADVLRARNGIQDQIERAVGNRVTYDGVGLS
PHIKZ098 W 542 Pseudomonas Phage Phikz MPNTTLVLPDVYESVTRRVAADIIGQLAKMMGLPEDTLVQFPGNVQTVPMNGGMFGNCCDSANVVKFDPEDHIIITYDEVADERYTLSTDVKNHQNFPWFVDETRGVRITPVRRFVDVRFDIEYKSKNITLAQRWLDEQRLWFSNNGQELVHTLTYHVDVPMPVQGILAAIYNTAQNSHWPMEETFPEYLNKYFTFPTTELADLSQKNKSLVIYERQVDVIGWYDYTSTPPTPEYDSESDGSYNVRFSYFLTYARPTHVWIEYPLTVHQCLVPSVIRPKYIYENYQQVDRKVSQFRGSLYHKFLLIRDKKIPYIQHPDIDTWDTDNIPINQLTFFSGLLTLCPDEIESGTLMSFDQLGRYSFSPFFLEYFEGVGTKAIDQNGIFQVRLYENDNYTRAECYLDGLMLKTKWKLDPCKVYHVQISIHKNLLLVFDDRWRCLQRYPRVCWTIFNLFGVGIGRKPFEEVKLLGKGRDRLPSEECPGEGTTCHTQCLNPTTEGVINWKDIVDAREEMNTRIGPDWDPTYLMGPLTVLYGNIITERKE
PHIKZ034 1 256 Pseudomonas Phage Phikz MSCCKAPVKPDTSIDIDHLGGGCQTYNHLQDMFFYLKEERLNAKPCDLSRYSIQYSYVDSMTYLYVLTDELTGETISWSVTKEFEKESPQAAFERDYIERELIYNRGIKRALDDMLEGLADADPSNVYKLERTDYGYRILRRINDELGAVIFKLSYTIHRGPIITPFSDKCTVPENVPDIFPTETQRALSRLVYRFHKLGVIFGDWVPDHVQKYNKMELTGYTRRTMDSYVILNMAIQSINLTDPELVTYHKYYSI
PHIKZ034 3 256 Pseudomonas Phage Phikz MSCCKAPVKPDTSIDIDHLGGGCQTYNHLQDMFFYLKEERLNAKPCDLSRYSIQYSYVDSMTYLYVLTDELTGETISWSVTKEFEKESPQAAFERDYIERELIYNRGIKRALDDMLEGLADADPSNVYKLERTDYGYRILRRINDELGAVIFKLSYTIHRGPIITPFSDKCTVPENVPDIFPTETQRALSRLVYRFHKLGVIFGDWVPDHVQKYNKMELTGYTRRTMDSYVILNMAIQSINLTDPELVTYHKYYSI
PHIKZ034 5 256 Pseudomonas Phage Phikz MSCCKAPVKPDTSIDIDHLGGGCQTYNHLQDMFFYLKEERLNAKPCDLSRYSIQYSYVDSMTYLYVLTDELTGETISWSVTKEFEKESPQAAFERDYIERELIYNRGIKRALDDMLEGLADADPSNVYKLERTDYGYRILRRINDELGAVIFKLSYTIHRGPIITPFSDKCTVPENVPDIFPTETQRALSRLVYRFHKLGVIFGDWVPDHVQKYNKMELTGYTRRTMDSYVILNMAIQSINLTDPELVTYHKYYSI
PHIKZ034 6 256 Pseudomonas Phage Phikz MSCCKAPVKPDTSIDIDHLGGGCQTYNHLQDMFFYLKEERLNAKPCDLSRYSIQYSYVDSMTYLYVLTDELTGETISWSVTKEFEKESPQAAFERDYIERELIYNRGIKRALDDMLEGLADADPSNVYKLERTDYGYRILRRINDELGAVIFKLSYTIHRGPIITPFSDKCTVPENVPDIFPTETQRALSRLVYRFHKLGVIFGDWVPDHVQKYNKMELTGYTRRTMDSYVILNMAIQSINLTDPELVTYHKYYSI
PHIKZ034 4 256 Pseudomonas Phage Phikz MSCCKAPVKPDTSIDIDHLGGGCQTYNHLQDMFFYLKEERLNAKPCDLSRYSIQYSYVDSMTYLYVLTDELTGETISWSVTKEFEKESPQAAFERDYIERELIYNRGIKRALDDMLEGLADADPSNVYKLERTDYGYRILRRINDELGAVIFKLSYTIHRGPIITPFSDKCTVPENVPDIFPTETQRALSRLVYRFHKLGVIFGDWVPDHVQKYNKMELTGYTRRTMDSYVILNMAIQSINLTDPELVTYHKYYSI
PHIKZ034 7 256 Pseudomonas Phage Phikz MSCCKAPVKPDTSIDIDHLGGGCQTYNHLQDMFFYLKEERLNAKPCDLSRYSIQYSYVDSMTYLYVLTDELTGETISWSVTKEFEKESPQAAFERDYIERELIYNRGIKRALDDMLEGLADADPSNVYKLERTDYGYRILRRINDELGAVIFKLSYTIHRGPIITPFSDKCTVPENVPDIFPTETQRALSRLVYRFHKLGVIFGDWVPDHVQKYNKMELTGYTRRTMDSYVILNMAIQSINLTDPELVTYHKYYSI
PHIKZ034 8 256 Pseudomonas Phage Phikz MSCCKAPVKPDTSIDIDHLGGGCQTYNHLQDMFFYLKEERLNAKPCDLSRYSIQYSYVDSMTYLYVLTDELTGETISWSVTKEFEKESPQAAFERDYIERELIYNRGIKRALDDMLEGLADADPSNVYKLERTDYGYRILRRINDELGAVIFKLSYTIHRGPIITPFSDKCTVPENVPDIFPTETQRALSRLVYRFHKLGVIFGDWVPDHVQKYNKMELTGYTRRTMDSYVILNMAIQSINLTDPELVTYHKYYSI
PHIKZ034 2 256 Pseudomonas Phage Phikz MSCCKAPVKPDTSIDIDHLGGGCQTYNHLQDMFFYLKEERLNAKPCDLSRYSIQYSYVDSMTYLYVLTDELTGETISWSVTKEFEKESPQAAFERDYIERELIYNRGIKRALDDMLEGLADADPSNVYKLERTDYGYRILRRINDELGAVIFKLSYTIHRGPIITPFSDKCTVPENVPDIFPTETQRALSRLVYRFHKLGVIFGDWVPDHVQKYNKMELTGYTRRTMDSYVILNMAIQSINLTDPELVTYHKYYSI
Endolysin gp144 S 260 Pseudomonas Phage Phikz MKVLRKGDRGDEVCQLQTLLNLCGYDVGKPDGIFGNNTFNQVVKFQKDNCLDSDGIVGKNTWAELFSKYSPPIPYKTIPMPTANKSRAAATPVMNAVENATGVRSQLLLTFASIESAFDYEIKAKTSSATGWFQFLTGTWKTMIENYGMKYGVLTDPTGALRKDPRISALMGAELIKENMNILRPVLKREPTDTDLYLAHFFGPGAARRFLTTGQNELAATHFPKEAQANPSIFYNKDGSPKTIQEVYNLMDGKVAAHRK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-11-17
Deposition Author(s): Liu, H. , Peng, Z. , Xiao, H. , Zhou, J.