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FASTA Sequence PDB Format mmCIF Format
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9XIR

Structure of dodecameric tpkb bound to amp-pnp from thermus thermophilus

PDB DOI: 10.2210/pdb9xir/pdb

Classification: STRUCTURAL GENOMICS
Organism(s): Thermus Thermophilus Hb8

Deposited: 2025-11-03
Deposition Author(s): Humbel, B. , Kanno, R. , Masui, R. , Mizoguchi, A. , Tani, K. , Torri, M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.2 Å

9xir
Literature

Structure of dodecameric tpkb bound to amp-pnp from thermus thermophilus

Humbel, B. , Kanno, R. , Masui, R. , Mizoguchi, A. , Tani, K. , Torri, M.

Primary Citation of Related Structures: 9XIR


Proteins
Molecule Chains Sequence Length Organism Sequence
Serine protein kinase A 692 Thermus Thermophilus Hb8 MGSSHHHHHHSSGENLYFQGGLNHMSELDFVRRGQDLKAYRALNWEGSFADYLRLLKEDPRPLRTSFQRVHDMILAHGVEEYTRFKEKLLHYRFFDDPFEGGKDAVFGLDKPLMRLVATLKAAAHRLGPERRILLLHGPVGSAKSTIARLLKKGLEAYSRTEEGKLFTFYWKTEEGPLPCPMHEEPLHLLPQDLREAFLEELRALHPDYPYPLEVEGDLCPVCRFQMREGLRKYEGDLAALLEHEVVVKRLVLSEKDRVGIGTFQPKDEKNQDSTELTGDINYRKVALYGSDSDPRAFNFDGELNIANRGIVEFIEILKLDVAFLYDLLTASQEHKIKSKKFAQTDIDEIVLGHTNEPEYRKLQANEYMEALRDRTIKIDVPYILRVSDEVRIYQRDFAKVRGKHIAPHTLEMAATWAVLTRLEPPKRAGLTLMQKLKLYDGKLLPGWTEEAVRELMGEAKREGLEGISPRYIQDKISNVLVTSEEPCINPFMVMNELEEGLKHHSLISDERTRERYRALLQEVKAEYAEIVKNEVQRAIAADEEALNRLFHNYIDHVKAYVLGEKVKNPYTGAPEPPNERLMRSIEERIDIPESRKDDFRREIMNYIGALALEGKPFTYKDNDRLRRALELKLFDDQKDTIRLSALVSGVVDPETQAKIDVVKARLIRDYGYCEHCASGVLEFAASLFARS
Serine protein kinase B 692 Thermus Thermophilus Hb8 MGSSHHHHHHSSGENLYFQGGLNHMSELDFVRRGQDLKAYRALNWEGSFADYLRLLKEDPRPLRTSFQRVHDMILAHGVEEYTRFKEKLLHYRFFDDPFEGGKDAVFGLDKPLMRLVATLKAAAHRLGPERRILLLHGPVGSAKSTIARLLKKGLEAYSRTEEGKLFTFYWKTEEGPLPCPMHEEPLHLLPQDLREAFLEELRALHPDYPYPLEVEGDLCPVCRFQMREGLRKYEGDLAALLEHEVVVKRLVLSEKDRVGIGTFQPKDEKNQDSTELTGDINYRKVALYGSDSDPRAFNFDGELNIANRGIVEFIEILKLDVAFLYDLLTASQEHKIKSKKFAQTDIDEIVLGHTNEPEYRKLQANEYMEALRDRTIKIDVPYILRVSDEVRIYQRDFAKVRGKHIAPHTLEMAATWAVLTRLEPPKRAGLTLMQKLKLYDGKLLPGWTEEAVRELMGEAKREGLEGISPRYIQDKISNVLVTSEEPCINPFMVMNELEEGLKHHSLISDERTRERYRALLQEVKAEYAEIVKNEVQRAIAADEEALNRLFHNYIDHVKAYVLGEKVKNPYTGAPEPPNERLMRSIEERIDIPESRKDDFRREIMNYIGALALEGKPFTYKDNDRLRRALELKLFDDQKDTIRLSALVSGVVDPETQAKIDVVKARLIRDYGYCEHCASGVLEFAASLFARS
Serine protein kinase C 692 Thermus Thermophilus Hb8 MGSSHHHHHHSSGENLYFQGGLNHMSELDFVRRGQDLKAYRALNWEGSFADYLRLLKEDPRPLRTSFQRVHDMILAHGVEEYTRFKEKLLHYRFFDDPFEGGKDAVFGLDKPLMRLVATLKAAAHRLGPERRILLLHGPVGSAKSTIARLLKKGLEAYSRTEEGKLFTFYWKTEEGPLPCPMHEEPLHLLPQDLREAFLEELRALHPDYPYPLEVEGDLCPVCRFQMREGLRKYEGDLAALLEHEVVVKRLVLSEKDRVGIGTFQPKDEKNQDSTELTGDINYRKVALYGSDSDPRAFNFDGELNIANRGIVEFIEILKLDVAFLYDLLTASQEHKIKSKKFAQTDIDEIVLGHTNEPEYRKLQANEYMEALRDRTIKIDVPYILRVSDEVRIYQRDFAKVRGKHIAPHTLEMAATWAVLTRLEPPKRAGLTLMQKLKLYDGKLLPGWTEEAVRELMGEAKREGLEGISPRYIQDKISNVLVTSEEPCINPFMVMNELEEGLKHHSLISDERTRERYRALLQEVKAEYAEIVKNEVQRAIAADEEALNRLFHNYIDHVKAYVLGEKVKNPYTGAPEPPNERLMRSIEERIDIPESRKDDFRREIMNYIGALALEGKPFTYKDNDRLRRALELKLFDDQKDTIRLSALVSGVVDPETQAKIDVVKARLIRDYGYCEHCASGVLEFAASLFARS
Serine protein kinase D 692 Thermus Thermophilus Hb8 MGSSHHHHHHSSGENLYFQGGLNHMSELDFVRRGQDLKAYRALNWEGSFADYLRLLKEDPRPLRTSFQRVHDMILAHGVEEYTRFKEKLLHYRFFDDPFEGGKDAVFGLDKPLMRLVATLKAAAHRLGPERRILLLHGPVGSAKSTIARLLKKGLEAYSRTEEGKLFTFYWKTEEGPLPCPMHEEPLHLLPQDLREAFLEELRALHPDYPYPLEVEGDLCPVCRFQMREGLRKYEGDLAALLEHEVVVKRLVLSEKDRVGIGTFQPKDEKNQDSTELTGDINYRKVALYGSDSDPRAFNFDGELNIANRGIVEFIEILKLDVAFLYDLLTASQEHKIKSKKFAQTDIDEIVLGHTNEPEYRKLQANEYMEALRDRTIKIDVPYILRVSDEVRIYQRDFAKVRGKHIAPHTLEMAATWAVLTRLEPPKRAGLTLMQKLKLYDGKLLPGWTEEAVRELMGEAKREGLEGISPRYIQDKISNVLVTSEEPCINPFMVMNELEEGLKHHSLISDERTRERYRALLQEVKAEYAEIVKNEVQRAIAADEEALNRLFHNYIDHVKAYVLGEKVKNPYTGAPEPPNERLMRSIEERIDIPESRKDDFRREIMNYIGALALEGKPFTYKDNDRLRRALELKLFDDQKDTIRLSALVSGVVDPETQAKIDVVKARLIRDYGYCEHCASGVLEFAASLFARS
Serine protein kinase E 692 Thermus Thermophilus Hb8 MGSSHHHHHHSSGENLYFQGGLNHMSELDFVRRGQDLKAYRALNWEGSFADYLRLLKEDPRPLRTSFQRVHDMILAHGVEEYTRFKEKLLHYRFFDDPFEGGKDAVFGLDKPLMRLVATLKAAAHRLGPERRILLLHGPVGSAKSTIARLLKKGLEAYSRTEEGKLFTFYWKTEEGPLPCPMHEEPLHLLPQDLREAFLEELRALHPDYPYPLEVEGDLCPVCRFQMREGLRKYEGDLAALLEHEVVVKRLVLSEKDRVGIGTFQPKDEKNQDSTELTGDINYRKVALYGSDSDPRAFNFDGELNIANRGIVEFIEILKLDVAFLYDLLTASQEHKIKSKKFAQTDIDEIVLGHTNEPEYRKLQANEYMEALRDRTIKIDVPYILRVSDEVRIYQRDFAKVRGKHIAPHTLEMAATWAVLTRLEPPKRAGLTLMQKLKLYDGKLLPGWTEEAVRELMGEAKREGLEGISPRYIQDKISNVLVTSEEPCINPFMVMNELEEGLKHHSLISDERTRERYRALLQEVKAEYAEIVKNEVQRAIAADEEALNRLFHNYIDHVKAYVLGEKVKNPYTGAPEPPNERLMRSIEERIDIPESRKDDFRREIMNYIGALALEGKPFTYKDNDRLRRALELKLFDDQKDTIRLSALVSGVVDPETQAKIDVVKARLIRDYGYCEHCASGVLEFAASLFARS
Serine protein kinase F 692 Thermus Thermophilus Hb8 MGSSHHHHHHSSGENLYFQGGLNHMSELDFVRRGQDLKAYRALNWEGSFADYLRLLKEDPRPLRTSFQRVHDMILAHGVEEYTRFKEKLLHYRFFDDPFEGGKDAVFGLDKPLMRLVATLKAAAHRLGPERRILLLHGPVGSAKSTIARLLKKGLEAYSRTEEGKLFTFYWKTEEGPLPCPMHEEPLHLLPQDLREAFLEELRALHPDYPYPLEVEGDLCPVCRFQMREGLRKYEGDLAALLEHEVVVKRLVLSEKDRVGIGTFQPKDEKNQDSTELTGDINYRKVALYGSDSDPRAFNFDGELNIANRGIVEFIEILKLDVAFLYDLLTASQEHKIKSKKFAQTDIDEIVLGHTNEPEYRKLQANEYMEALRDRTIKIDVPYILRVSDEVRIYQRDFAKVRGKHIAPHTLEMAATWAVLTRLEPPKRAGLTLMQKLKLYDGKLLPGWTEEAVRELMGEAKREGLEGISPRYIQDKISNVLVTSEEPCINPFMVMNELEEGLKHHSLISDERTRERYRALLQEVKAEYAEIVKNEVQRAIAADEEALNRLFHNYIDHVKAYVLGEKVKNPYTGAPEPPNERLMRSIEERIDIPESRKDDFRREIMNYIGALALEGKPFTYKDNDRLRRALELKLFDDQKDTIRLSALVSGVVDPETQAKIDVVKARLIRDYGYCEHCASGVLEFAASLFARS
Serine protein kinase G 692 Thermus Thermophilus Hb8 MGSSHHHHHHSSGENLYFQGGLNHMSELDFVRRGQDLKAYRALNWEGSFADYLRLLKEDPRPLRTSFQRVHDMILAHGVEEYTRFKEKLLHYRFFDDPFEGGKDAVFGLDKPLMRLVATLKAAAHRLGPERRILLLHGPVGSAKSTIARLLKKGLEAYSRTEEGKLFTFYWKTEEGPLPCPMHEEPLHLLPQDLREAFLEELRALHPDYPYPLEVEGDLCPVCRFQMREGLRKYEGDLAALLEHEVVVKRLVLSEKDRVGIGTFQPKDEKNQDSTELTGDINYRKVALYGSDSDPRAFNFDGELNIANRGIVEFIEILKLDVAFLYDLLTASQEHKIKSKKFAQTDIDEIVLGHTNEPEYRKLQANEYMEALRDRTIKIDVPYILRVSDEVRIYQRDFAKVRGKHIAPHTLEMAATWAVLTRLEPPKRAGLTLMQKLKLYDGKLLPGWTEEAVRELMGEAKREGLEGISPRYIQDKISNVLVTSEEPCINPFMVMNELEEGLKHHSLISDERTRERYRALLQEVKAEYAEIVKNEVQRAIAADEEALNRLFHNYIDHVKAYVLGEKVKNPYTGAPEPPNERLMRSIEERIDIPESRKDDFRREIMNYIGALALEGKPFTYKDNDRLRRALELKLFDDQKDTIRLSALVSGVVDPETQAKIDVVKARLIRDYGYCEHCASGVLEFAASLFARS
Serine protein kinase H 692 Thermus Thermophilus Hb8 MGSSHHHHHHSSGENLYFQGGLNHMSELDFVRRGQDLKAYRALNWEGSFADYLRLLKEDPRPLRTSFQRVHDMILAHGVEEYTRFKEKLLHYRFFDDPFEGGKDAVFGLDKPLMRLVATLKAAAHRLGPERRILLLHGPVGSAKSTIARLLKKGLEAYSRTEEGKLFTFYWKTEEGPLPCPMHEEPLHLLPQDLREAFLEELRALHPDYPYPLEVEGDLCPVCRFQMREGLRKYEGDLAALLEHEVVVKRLVLSEKDRVGIGTFQPKDEKNQDSTELTGDINYRKVALYGSDSDPRAFNFDGELNIANRGIVEFIEILKLDVAFLYDLLTASQEHKIKSKKFAQTDIDEIVLGHTNEPEYRKLQANEYMEALRDRTIKIDVPYILRVSDEVRIYQRDFAKVRGKHIAPHTLEMAATWAVLTRLEPPKRAGLTLMQKLKLYDGKLLPGWTEEAVRELMGEAKREGLEGISPRYIQDKISNVLVTSEEPCINPFMVMNELEEGLKHHSLISDERTRERYRALLQEVKAEYAEIVKNEVQRAIAADEEALNRLFHNYIDHVKAYVLGEKVKNPYTGAPEPPNERLMRSIEERIDIPESRKDDFRREIMNYIGALALEGKPFTYKDNDRLRRALELKLFDDQKDTIRLSALVSGVVDPETQAKIDVVKARLIRDYGYCEHCASGVLEFAASLFARS
Serine protein kinase I 692 Thermus Thermophilus Hb8 MGSSHHHHHHSSGENLYFQGGLNHMSELDFVRRGQDLKAYRALNWEGSFADYLRLLKEDPRPLRTSFQRVHDMILAHGVEEYTRFKEKLLHYRFFDDPFEGGKDAVFGLDKPLMRLVATLKAAAHRLGPERRILLLHGPVGSAKSTIARLLKKGLEAYSRTEEGKLFTFYWKTEEGPLPCPMHEEPLHLLPQDLREAFLEELRALHPDYPYPLEVEGDLCPVCRFQMREGLRKYEGDLAALLEHEVVVKRLVLSEKDRVGIGTFQPKDEKNQDSTELTGDINYRKVALYGSDSDPRAFNFDGELNIANRGIVEFIEILKLDVAFLYDLLTASQEHKIKSKKFAQTDIDEIVLGHTNEPEYRKLQANEYMEALRDRTIKIDVPYILRVSDEVRIYQRDFAKVRGKHIAPHTLEMAATWAVLTRLEPPKRAGLTLMQKLKLYDGKLLPGWTEEAVRELMGEAKREGLEGISPRYIQDKISNVLVTSEEPCINPFMVMNELEEGLKHHSLISDERTRERYRALLQEVKAEYAEIVKNEVQRAIAADEEALNRLFHNYIDHVKAYVLGEKVKNPYTGAPEPPNERLMRSIEERIDIPESRKDDFRREIMNYIGALALEGKPFTYKDNDRLRRALELKLFDDQKDTIRLSALVSGVVDPETQAKIDVVKARLIRDYGYCEHCASGVLEFAASLFARS
Serine protein kinase J 692 Thermus Thermophilus Hb8 MGSSHHHHHHSSGENLYFQGGLNHMSELDFVRRGQDLKAYRALNWEGSFADYLRLLKEDPRPLRTSFQRVHDMILAHGVEEYTRFKEKLLHYRFFDDPFEGGKDAVFGLDKPLMRLVATLKAAAHRLGPERRILLLHGPVGSAKSTIARLLKKGLEAYSRTEEGKLFTFYWKTEEGPLPCPMHEEPLHLLPQDLREAFLEELRALHPDYPYPLEVEGDLCPVCRFQMREGLRKYEGDLAALLEHEVVVKRLVLSEKDRVGIGTFQPKDEKNQDSTELTGDINYRKVALYGSDSDPRAFNFDGELNIANRGIVEFIEILKLDVAFLYDLLTASQEHKIKSKKFAQTDIDEIVLGHTNEPEYRKLQANEYMEALRDRTIKIDVPYILRVSDEVRIYQRDFAKVRGKHIAPHTLEMAATWAVLTRLEPPKRAGLTLMQKLKLYDGKLLPGWTEEAVRELMGEAKREGLEGISPRYIQDKISNVLVTSEEPCINPFMVMNELEEGLKHHSLISDERTRERYRALLQEVKAEYAEIVKNEVQRAIAADEEALNRLFHNYIDHVKAYVLGEKVKNPYTGAPEPPNERLMRSIEERIDIPESRKDDFRREIMNYIGALALEGKPFTYKDNDRLRRALELKLFDDQKDTIRLSALVSGVVDPETQAKIDVVKARLIRDYGYCEHCASGVLEFAASLFARS
Serine protein kinase K 692 Thermus Thermophilus Hb8 MGSSHHHHHHSSGENLYFQGGLNHMSELDFVRRGQDLKAYRALNWEGSFADYLRLLKEDPRPLRTSFQRVHDMILAHGVEEYTRFKEKLLHYRFFDDPFEGGKDAVFGLDKPLMRLVATLKAAAHRLGPERRILLLHGPVGSAKSTIARLLKKGLEAYSRTEEGKLFTFYWKTEEGPLPCPMHEEPLHLLPQDLREAFLEELRALHPDYPYPLEVEGDLCPVCRFQMREGLRKYEGDLAALLEHEVVVKRLVLSEKDRVGIGTFQPKDEKNQDSTELTGDINYRKVALYGSDSDPRAFNFDGELNIANRGIVEFIEILKLDVAFLYDLLTASQEHKIKSKKFAQTDIDEIVLGHTNEPEYRKLQANEYMEALRDRTIKIDVPYILRVSDEVRIYQRDFAKVRGKHIAPHTLEMAATWAVLTRLEPPKRAGLTLMQKLKLYDGKLLPGWTEEAVRELMGEAKREGLEGISPRYIQDKISNVLVTSEEPCINPFMVMNELEEGLKHHSLISDERTRERYRALLQEVKAEYAEIVKNEVQRAIAADEEALNRLFHNYIDHVKAYVLGEKVKNPYTGAPEPPNERLMRSIEERIDIPESRKDDFRREIMNYIGALALEGKPFTYKDNDRLRRALELKLFDDQKDTIRLSALVSGVVDPETQAKIDVVKARLIRDYGYCEHCASGVLEFAASLFARS
Serine protein kinase L 692 Thermus Thermophilus Hb8 MGSSHHHHHHSSGENLYFQGGLNHMSELDFVRRGQDLKAYRALNWEGSFADYLRLLKEDPRPLRTSFQRVHDMILAHGVEEYTRFKEKLLHYRFFDDPFEGGKDAVFGLDKPLMRLVATLKAAAHRLGPERRILLLHGPVGSAKSTIARLLKKGLEAYSRTEEGKLFTFYWKTEEGPLPCPMHEEPLHLLPQDLREAFLEELRALHPDYPYPLEVEGDLCPVCRFQMREGLRKYEGDLAALLEHEVVVKRLVLSEKDRVGIGTFQPKDEKNQDSTELTGDINYRKVALYGSDSDPRAFNFDGELNIANRGIVEFIEILKLDVAFLYDLLTASQEHKIKSKKFAQTDIDEIVLGHTNEPEYRKLQANEYMEALRDRTIKIDVPYILRVSDEVRIYQRDFAKVRGKHIAPHTLEMAATWAVLTRLEPPKRAGLTLMQKLKLYDGKLLPGWTEEAVRELMGEAKREGLEGISPRYIQDKISNVLVTSEEPCINPFMVMNELEEGLKHHSLISDERTRERYRALLQEVKAEYAEIVKNEVQRAIAADEEALNRLFHNYIDHVKAYVLGEKVKNPYTGAPEPPNERLMRSIEERIDIPESRKDDFRREIMNYIGALALEGKPFTYKDNDRLRRALELKLFDDQKDTIRLSALVSGVVDPETQAKIDVVKARLIRDYGYCEHCASGVLEFAASLFARS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-11-03
Deposition Author(s): Humbel, B. , Kanno, R. , Masui, R. , Mizoguchi, A. , Tani, K. , Torri, M.