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FASTA Sequence PDB Format mmCIF Format
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9WHK

Structure of klebsiella pneumoniae trypsin-hamab bound with dna, dimer

PDB DOI: 10.2210/pdb9whk/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Klebsiella Pneumoniae , Synthetic Construct

Deposited: 2025-08-27
Deposition Author(s): Chen, M.R. , Huang, P.P. , Liu, J.X. , Shen, L.B. , Xiao, Y.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.22 Å

Literature

Structure of klebsiella pneumoniae trypsin-hamab bound with dna, dimer

Chen, M.R. , Huang, P.P. , Liu, J.X. , Shen, L.B. , Xiao, Y.B.

Primary Citation of Related Structures: 9WHK


Proteins
Molecule Chains Sequence Length Organism Sequence
Anti-bacteriophage protein A/HamA C-terminal domain-containing protein A 528 Klebsiella Pneumoniae , Synthetic Construct MSIDIADKLGVKISYNNKNSSGFICHGDDYSYVLTAKHSICKSSPNDCKFKHKKCDTCVFSGVAKNKVSICKPDTDTFPLCKVKDVLLSPKKDVAILVLNKKSHIDLKTKELPSTKIINTANYNSSHKFVSCGYPAINEHQSVQPLHYNNFSLFRNEKICLQIINDTLTALEDPKNGLSGNSGAGIILNSSSCVGLLGLYTDTGDYGICYGDIVDFSINELLTSSGYVPLEMEEDLSNNFKALIQSDFMECFVRMECDLNLDKNRIVNLYRLCLDGKKYNYVKIGERLIDCIPSFSLSRKQLMRCRERNAFGKATLSAIRNFLKIERKTKISEMLLQGFLESYLHAPKLYSFDEINNAGFHGAHVKFNKNRNVELIHSAAFISNSLSDGVSYAIDVILKAFPELRSLDGLLGNTFLETNFTEDECQILASLLIPGESSYSQGYEDRLAIFIGYNHKIEESLIYENASRFPSLLEQKIILNVQQALEYRKEEINKLSIVNATIDCFFVPFDDVNKFNDEFIESLKNEED
Anti-bacteriophage protein A/HamA C-terminal domain-containing protein D 528 Klebsiella Pneumoniae , Synthetic Construct MSIDIADKLGVKISYNNKNSSGFICHGDDYSYVLTAKHSICKSSPNDCKFKHKKCDTCVFSGVAKNKVSICKPDTDTFPLCKVKDVLLSPKKDVAILVLNKKSHIDLKTKELPSTKIINTANYNSSHKFVSCGYPAINEHQSVQPLHYNNFSLFRNEKICLQIINDTLTALEDPKNGLSGNSGAGIILNSSSCVGLLGLYTDTGDYGICYGDIVDFSINELLTSSGYVPLEMEEDLSNNFKALIQSDFMECFVRMECDLNLDKNRIVNLYRLCLDGKKYNYVKIGERLIDCIPSFSLSRKQLMRCRERNAFGKATLSAIRNFLKIERKTKISEMLLQGFLESYLHAPKLYSFDEINNAGFHGAHVKFNKNRNVELIHSAAFISNSLSDGVSYAIDVILKAFPELRSLDGLLGNTFLETNFTEDECQILASLLIPGESSYSQGYEDRLAIFIGYNHKIEESLIYENASRFPSLLEQKIILNVQQALEYRKEEINKLSIVNATIDCFFVPFDDVNKFNDEFIESLKNEED
DNA polymerase theta (Helicase domain only) B 853 Klebsiella Pneumoniae , Synthetic Construct MKKIDSFIIEKIFNSAYFKKLYKKIIKAYSALTIESENHFNISNTELRDIFRFIDLLANSSNQNARMCAYHWISLLEPFSDKWGKFSLISSLVYSKLGLYALDFNDHALPFSQRLENEAKKSAQTFSNTYIFTDAQFDIYTDMLKSPYYSFSGPTSLGKSFILKRYIEEIIQNSTSNIVILVPTRALISQFSLEIKNELHELIENFNYKIVTHGSLASKSDAVIIKHIFILTPERLLNLFSQGKVVSIDYLFVDEAHKLSNNDDSDVRSLTEYNAIDSALFNNPNMKIVFSSPNIENPEVFLNLFGREKIYASRIIESPVSQNLYLIDFHKKEIKYFSNSECIDIESGSLYTLNKKSDFIYNIGSRHGSNMIYCSSRAKAVDSALEFYQIRLSENIVLSPLLIDSIKKISNYIHPEYYLAMFLMKRIAYHHGQLPQAIRNIVEELFRKGDIDFIFCTPTLVEGVNMPTRNIFINCDDKIRLIADAKKNPNKTLAFWNLAGRAGRYCKELSGNIFCLQDESNRWDNTDIFLEKTAHLTTTIDARIESKSGLREIERYLSDTETDIYKRNQAIEYLANIMAVDTIRFKNNLKDSFVLRKFYDIHREELLSLAKLKANDILDIPIDIINSYKSLNFKIQRKVFDYVSVSPVNKKLPSLDYANILSVLELFYDLYRWGETETKYVKSKGQLTYFATLMNQWTNDYSINRIINENIDIKRTIVIERGQQPIPFDKNDINHVNKVIDDILYNIERILSFFFEKYFNHYYKCLAAILGEDNAGHNWATFLEYGSKNPLCISLQTLGISRHAANIIASSKELRKYLKFNEDSYEIISVNKQGLLNSLQKDSVEYGEVKIFL
DNA polymerase theta (Helicase domain only) E 853 Klebsiella Pneumoniae , Synthetic Construct MKKIDSFIIEKIFNSAYFKKLYKKIIKAYSALTIESENHFNISNTELRDIFRFIDLLANSSNQNARMCAYHWISLLEPFSDKWGKFSLISSLVYSKLGLYALDFNDHALPFSQRLENEAKKSAQTFSNTYIFTDAQFDIYTDMLKSPYYSFSGPTSLGKSFILKRYIEEIIQNSTSNIVILVPTRALISQFSLEIKNELHELIENFNYKIVTHGSLASKSDAVIIKHIFILTPERLLNLFSQGKVVSIDYLFVDEAHKLSNNDDSDVRSLTEYNAIDSALFNNPNMKIVFSSPNIENPEVFLNLFGREKIYASRIIESPVSQNLYLIDFHKKEIKYFSNSECIDIESGSLYTLNKKSDFIYNIGSRHGSNMIYCSSRAKAVDSALEFYQIRLSENIVLSPLLIDSIKKISNYIHPEYYLAMFLMKRIAYHHGQLPQAIRNIVEELFRKGDIDFIFCTPTLVEGVNMPTRNIFINCDDKIRLIADAKKNPNKTLAFWNLAGRAGRYCKELSGNIFCLQDESNRWDNTDIFLEKTAHLTTTIDARIESKSGLREIERYLSDTETDIYKRNQAIEYLANIMAVDTIRFKNNLKDSFVLRKFYDIHREELLSLAKLKANDILDIPIDIINSYKSLNFKIQRKVFDYVSVSPVNKKLPSLDYANILSVLELFYDLYRWGETETKYVKSKGQLTYFATLMNQWTNDYSINRIINENIDIKRTIVIERGQQPIPFDKNDINHVNKVIDDILYNIERILSFFFEKYFNHYYKCLAAILGEDNAGHNWATFLEYGSKNPLCISLQTLGISRHAANIIASSKELRKYLKFNEDSYEIISVNKQGLLNSLQKDSVEYGEVKIFL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') c 9 NA AAAAAAAAA
DNA (5'-D(P*AP*AP*AP*AP*AP*AP*A)-3') f 7 NA AAAAAAA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-08-27
Deposition Author(s): Chen, M.R. , Huang, P.P. , Liu, J.X. , Shen, L.B. , Xiao, Y.B.